Array 1 364627-360973 **** Predicted by CRISPRDetect 2.4 *** >NZ_QSOJ01000002.1 Ruminococcus bromii strain TM09-18AC TM09-18AC.Scaf2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 364626 36 100.0 29 .................................... TGGCAACTCCCGAAAGGTCAAGTGTAAGC 364561 36 100.0 29 .................................... ATGCTTTTGTGCCGTCTTGTTGCGCCGCG 364496 36 100.0 30 .................................... TGATGATTTATGCAGTTGGTCACCATTTTT 364430 36 100.0 30 .................................... AATTTTTTTGAGTACATACATTCAGAAAAG 364364 36 100.0 30 .................................... CCGCGGTGCGGTCTGTCGCGTACAGAGTGG 364298 36 100.0 29 .................................... TAGCGGATTTGTTGACCGCATTGATACGG 364233 36 100.0 29 .................................... CGATAGTATGCTTGAGTGTGAGAGATACA 364168 36 100.0 30 .................................... GGGAAGAATAAATGCCAACAATTCCAAAAA 364102 36 100.0 30 .................................... TTCATCAAGAAAAGGAACTGCAACGGGTGA 364036 36 100.0 30 .................................... CGGAATCCCCGATGATAACTGGAATGACCC 363970 36 100.0 30 .................................... GACATAAAAATCACTCCTTTAATAAAGATT 363904 36 100.0 30 .................................... TTTTTCGCTTGTTGGTGTTGTTTCAACATC 363838 36 100.0 29 .................................... TTGTTTCGGGCTATAACGAAACAACAAAC 363773 36 100.0 30 .................................... GAACACAGAGAATAACACGGAGCTGTGCTA 363707 36 100.0 30 .................................... TATACAATGCCGTGACTTTCACTTTTATTG 363641 36 100.0 30 .................................... TGCAATGCCTGCCGTTTCTGCATTATCCAT 363575 36 100.0 30 .................................... GTGCGGATTGCATTTGATTACACATTCATT 363509 36 100.0 29 .................................... CTTCATCACGGCTTTGGTCAGATGTAAAC 363444 36 100.0 30 .................................... GGATTATGTGAATTATATTTAAACTGCTCT 363378 36 100.0 30 .................................... TAATTTCTGATAAAAATATTGTGTAGCTGA 363312 36 100.0 30 .................................... TGTATAGCAAAAGAGAGGTTGAATTATGAT 363246 36 100.0 30 .................................... TGTATAGCAAAAGAGAGGTTGAATTATGAT 363180 36 100.0 30 .................................... ATATTCGTGATTATAAGCAGTTTCGTTAAT 363114 36 100.0 29 .................................... CAAAGCGGATACTCTCACGCACTCAGAGT 363049 36 100.0 30 .................................... TCACAAAATCACAGTAGGTTAAATGGGGCA 362983 36 100.0 30 .................................... AAAAATAACTTGACAAATTGCATTAGGTGT 362917 36 100.0 29 .................................... TGCAACAAGCAATCAAACAGACCATCAAA 362852 36 100.0 29 .................................... TCGTGGGTACGCAAACATGTACAGCCTTA 362787 36 100.0 30 .................................... TAGGTGCTACTGTTTACGAACATAAAACTA 362721 36 100.0 30 .................................... AGTATATGTATAGTTTAACAAGCAATTATA 362655 36 100.0 29 .................................... TTTTCAATGTCGCCTTTTGCAAATGCACT 362590 36 100.0 30 .................................... ATAACGGAACAACAGCAGATGTTAACAGCT 362524 36 100.0 29 .................................... TGCTAACTCGCTCACTCCGCACTTCCATC 362459 36 100.0 30 .................................... GCACATGGCACAAGACCTATATGTCTGTTG 362393 36 100.0 30 .................................... TCATGGAGGAAATTGCAAAGCAGGTTGTAG 362327 36 100.0 30 .................................... GATTTTGTGGAAACAGTTTACGGTGTTAAT 362261 36 100.0 30 .................................... TTTTCCCTTTCTGTGTCCTGTAGTCTATGG 362195 36 100.0 29 .................................... CATTCGTTGAGCATCATTCATCAAATGTG 362130 36 100.0 31 .................................... TCAACGATTGTGAATCCACCCGCCCCGAATT 362063 36 100.0 30 .................................... TTATTCAATTCCCTTTTGGTGTACCACCAT 361997 36 100.0 30 .................................... TAAAAAATTTTTCCGCAATGCTATCCAGTT 361931 36 100.0 30 .................................... TAAATTTTCGCCATTTATACCATCCTTTCA 361865 36 100.0 29 .................................... GTCAACCGTGTTTTTAATCGGCACTCTGA 361800 36 100.0 30 .................................... ACGATGATATCATTGCCGATAGCTTGAAAA 361734 36 100.0 30 .................................... GGTAACAGGATGGGCTTCTGTGCCTTTTGG 361668 36 100.0 30 .................................... AAGACCTGTCTCTGCGAGTTGTCTGGCCTG 361602 36 100.0 30 .................................... CTCGGCAATGATGCTATGAGGATGCATACT 361536 36 100.0 30 .................................... TAACATCAACGCTTGCTGTGCCGTCTGTCG 361470 36 100.0 30 .................................... AGTGTACATTTTTGAAGTGATTATCACCCG 361404 36 100.0 30 .................................... TTCGGCAAGTATGTGTTTATATAAATTTCC 361338 36 100.0 30 .................................... CCATACTTTCAGATAGTGCGTGTCACCGCT 361272 36 100.0 30 .................................... ACCAAAAATAAAAAAAGACCGCTCACAGCT 361206 36 100.0 30 .................................... TCGCAGGCTTGCTAAAAGCTTCGTCGCAGG 361140 36 100.0 30 .................................... CGGAGCTTGCAACCCACTCCGAGGACGGCG 361074 36 100.0 30 .................................... GGAGAGAGTAACAAAACCACTTATCACGCA 361008 34 88.9 0 .......................T...--......T | C,A [360976,360987] ========== ====== ====== ====== ==================================== =============================== ================== 56 36 99.8 30 GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Left flank : TTTTTTTGAAAATTTGTGTAATACAAAATATTTTCCGCAAATTTCAGAAATTAAAGCTTTATGTGTGAGCTTGTGCTGCGAGCTTTCTAAGGAAAATGATTATGATTTTCAGTTCTGCGAAAGTATCGAAACAATGGCATTAGTAAAATTGTTTTCATTTGCACCTGCGGATGCCTCGGATGATAATGTCGGTCATCTTTTAAGATATTTCAAACTTATGAAAGAGTATCTGGGAATAAAGTGTTTTATTGTTCAAAATCTGCATATTTATCTTGATGACGGTGAATGTGAAAATCTTTTGGAATCTGCCGTTATGCACGGTATATATTTGCTTAACATTGAAAACTCAGTACCGAAAGAAGTTTCTGAATACGAAAAACTTGTTGTGATTGATAATGATTTGTGTGAATTTTATTGACAATCGTTATACAAATGTTATAAAATAACCCTATAGATTTGCCGTGCACGGTATAGTGGGTGCATTTTATTCTCAATTTGAG # Right flank : TTTACTCGTGGACTGTGAAAAAACAGCATTGCAAAAAACAATATGGCACATAACCGTTATCACTTTCGGTTATGTGCCTTTTGTAGTTTAATAAGTTTGTTAAGAATACCACGATTGATTACAGTCCAAAACAAGGAAGATTTCAGTGCGTTAATTTCCAAAGTAAGTTTCACCGTGGAAATTACTTTGGGGATTAACTATTTACTTTTTCGTTTAAATTTGCGGTAAATATGAATTGTATAATCCGTTTTATTGTGTTATTATGTAGTAAAATAGTGTGCAACATTGGTGTTTTGAAAAAAATTATGTTGCTGAAATTAAACTTGAAATAACTGACGGGTGGCATATGGTTCGCAAAGTTGACAAAACAAAGCTTCTGACTGTTGTTGGGATAGTTATATTCCTGTTTGGAGGTGCGGTGAGAATTTTTTCTCATCTTACTTCCTCGGCGGATAATTATATTGAAAATTTTGATGTTATTATCTTTTCCGGGCTTATTA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTGAGAATAGTGTAAATCTATAAGGTAGTAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //