Array 1 108731-108301 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_NRCY01000003.1 Aggregatibacter aphrophilus strain PN_521 NODE_3_length_163280_cov_76.8741, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence                 	Spacer_Sequence                    	Insertion/Deletion
==========	======	======	======	================================	===================================	==================
    108730	    32	 100.0	    35	................................	TGGAGTGAGCGTTCCAGAAGCCAAGCAGACGTGTT	
    108663	    32	 100.0	    34	................................	AACAGAAAACTAAACAAACAAAAATCATTTTGGG 	
    108597	    32	 100.0	    33	................................	TATCGTGAGCCAGTCAATATGATAATCCATTTT  	
    108532	    32	 100.0	    35	................................	TTAAATTTGCGCGATGACGCTTAAATGTAGCTGTA	
    108465	    32	 100.0	    35	................................	TGTTAAGTTACTGATTAAAATCGTTGGTAGCATTT	
    108398	    32	 100.0	    34	................................	ATCTATGTAATCCTTATTTATTACATAGCCATTG 	
    108332	    32	  84.4	     0	......A...T..G.A......A.........	|                                  	
==========	======	======	======	================================	===================================	==================
         7	    32	  97.8	    34	GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC	                                   	       

# Left flank :   TTGATGATATAAACCATGTTAATGCTGATTACTTATGATATTTCTTTTGACGATCCAAACGGGCAAGCGCGATTACGCCGTATCGCAAAACATTGCTTAGATTACGGCGTGCGGGCGCAATATTCAGTATTTGAATGCGATGTCACGCCTGACCAATGGGTCATTTTGAAAAATAAACTGTTGGAAACCTACGACCCTACATGTGACAGCCTGCGTTTTTATCATTTAGGCAGTAAGTGGCGCAATAAAGTGGAGCATCATGGGGCAAAACCGGCAGTGGATGTATTTAAAGACGTGCTTGTCATTTAGTTCGCTAACCTGTTGTTCTCATTAAAACTCTGATGGGATAGCGATCCTTATTTTCTTTAACAATTTGGATGAATTAATCTATTTGTATAACGACAATGTGGCCGTTATACTTACCAAACTCCTTATCATAAAATCAGTTAGCGAAATACGGTGTTTAATACGCTGATTTTTCTTGCTTTTTTAGGTAGGGA
# Right flank :  AAGATGTCGAGCAAGTCGCGCTCATTTTGTGCGGTGGCAACCACCTTCGGGTGAGTATATATTTTGTCTTTACGAAAAATAAGTGATCTATAAGTTTCAAGCCTTTCTACAAAAACGTCTGGAAAATCCACCGCACTTTTCTTTCATAAAAATAAAAAGCTGAACCTCTTTCGAGATTCAGCTTTTCTTTTGGGGTTAGATCATTTTAACTGCCCTTTTTGTTTATCTATGCTGAAATATTGTTACATTTTCGGAATTTCAACGCCTGAAGAGAGCAGGTCTTGAATATCCGATTTCAGTACATCAGCTTTTGGCCCATAAATGGCTTGAATGCCAGTGCCTTTGACGATAAAACCCATTGCGCCTGCTTGTTTCCAAGAGGCTGCATCACCTACCAACTGAGGGTTGTGAACGGTGATACGTAAACGGGTCATACAAGCATCCACCTCGGCAATATTGTTGCGTCCACCGAGAAGATTGATGATTTGCACCACTTGTGC

# Questionable array : NO	 Score: 6.15
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [6,4] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GCAGCCGCCTCCGCGCGGCTGTGTGTTGAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  R [-4.40,-4.70] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [5-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [48.3-65.0]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.37,5.55   Confidence: HIGH] 

# Array family : I-C [Matched known repeat from this family],   
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