Array 1 440524-441022 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134312.1 Enterococcus faecalis strain NCTC8745 chromosome 1, complete sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 440524 37 100.0 29 ..................................... GACAACATTGTAATTGAGAACGCACGTAT 440590 37 97.3 29 ....................................A ACTATTGTCCGTTTTGCGGGAAAGAAGTT 440656 37 100.0 29 ..................................... GATGATGCACAGCAAAACACATTTAAGAT 440722 37 97.3 29 ....................................A GCTTTAAGCTCCTTCAAGACTTTCTCTTT 440788 37 100.0 29 ..................................... GGCTTGTTGTTACGTGTATTACAGACGGG 440854 37 97.3 29 ....................................G CACACACACGCTACTCACAGGCATTATAG 440920 37 100.0 29 ..................................... CATAGCAGACCAACCTGCTCCATCGCTTG 440986 37 97.3 0 ....................................C | ========== ====== ====== ====== ===================================== ============================= ================== 8 37 98.6 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : GCACAATTAAATGATAAACCAGAAGTCAAATCAATGATTGAGAAGTTAACTGGAACAATTAGTCAATTAATTGGCTATGAATTGTTGGAACATGAAATGGATTTGGAAGAAGATGGCATCACTGTGCAGGAACTTTTCAAAGCTCTTGGAATCAAAATCGAAACAACGAGTGATACGATTTTTGAAAAAGTTATGGAAATTACACAAGTACATCGTTATTTATCAAAGAAAAAATTATTGATTTTTATTAATGCGTGTACGTATTTGACAGAGGATGAAGTGCAACAAGTGGTAGAATATATCTCTTTAAATAATGTGGATGTCCTGTTTTTAGAACAAAGGGTGGTCCAGAACAGATTCCAATATATTTTGGACGAAAACTTTTATTTGAGTTATGAAAAAGCTTAAATTGTTACTGATTAGTGGTTCATTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAGTACGGAACTTTGGAAAAAAATAATTCTCCGAG # Right flank : CAATGTAAATGCTCATTATGATTTACATATGTTTTAGAGTCATGTTGTTTAGTTTTCGCAGATACGATTTGATTGATGTAAAAATATCGTTAATATGTATAAATATGGTTATTATATAAAAAATATAAGTAATAAATTGAAGCTTTGCTAAAGCAAGTGATGCAATTACGAAATTATTTAATTTTAGAGTCACGTTATTTATTACTTTACGAATAGAGAATACGATTATCTATAAATCAAGAATTAATCCCCAATTTATTGAAAATGACACTCCCTGTTTTATTAATATTTCATGCTTTTGTTGTACTATTTGATGATACAAAAAAGTAAAACTGAGGCCCCAATTAAAGTCAAGTTAACCACATTGAAAGATAGAACTTTCAATGTGGTTAAAGATGCTTAATGAGATTCATGAAACATAGAAAGCGGATTAATTTCCTATGCTCTTTATTTGTATATTTTCTTGGGAATCATTATTGATTGTGGATTAAAAAGATAAT # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.98, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [63.3-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], // Array 2 1686121-1684896 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR134312.1 Enterococcus faecalis strain NCTC8745 chromosome 1, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ============================= ================== 1686120 37 97.3 29 ....................................A CATGGAACTAATGGAATGTGACAGAGAAT 1686054 37 100.0 29 ..................................... TGAGACATCAGCTTCACTCTCTTTCTGAT 1685988 37 100.0 29 ..................................... ACGTAAACGGATATTAGTGCGAATGCACA 1685922 37 100.0 29 ..................................... CAATATTAAGATTAACGAAACTAATAAAT 1685856 37 100.0 29 ..................................... TATATTGAGTCACGTCCGAGAGTTTACGG 1685790 37 97.3 29 ....................................A ACAAATTCATCTATTGTTTCGCAATGTTC 1685724 37 97.3 29 ....................................A AAATAAATGGAACTCATAGTAAGAGGGTT 1685658 37 100.0 29 ..................................... GAACAATCAGGTAAAGCATACTTTACAGA 1685592 37 97.3 29 ....................................A GTGCGTTTCAACTCTGTTACGTCAAGTGG 1685526 37 100.0 29 ..................................... TCCTCATTTTTAGACAAGTTCATTGCCAC 1685460 37 100.0 29 ..................................... TCTGGATCAGGAGGTGGATCTTATCAAGG 1685394 37 100.0 29 ..................................... GAGGTTTGTGTAACCAATTTACTGAAGCT 1685328 37 100.0 29 ..................................... GCACCGTCAACGTATGTTGGGAGCTCGTA 1685262 37 97.3 29 ....................................A GCAAAAGAAGAAAAGAAAACAAAAGTTGC 1685196 37 97.3 29 ....................................A TGTTGAAGTAGAGCGTGATGCAATCCTAA 1685130 37 97.3 29 ....................................C AATTTAAATTAGCGTATATGATGATTAGC 1685064 37 100.0 29 ..................................... GGTGAAGATGTTGATTCTGGATTATCAAA 1684998 37 100.0 29 ..................................... GGGTTGACTAAAGAGCCGTCAAAAGTTTT 1684932 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ============================= ================== 19 37 99.0 29 GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Left flank : CATATATCCTTATCAAGTAGTAAATGCTTCTTTTGACTTTCAAGAGGGACGAACAACAGAAGGTGGAGAAATGACACACATGATTGGCTTTGCCACTTCGCAAGAAAATACCTATGAAGATTTGGAGCAACTAAGCGTACCTGCTCATACATGGGCGGTTTTTCCAAATGAAGGTCCTTTCCCACAAACTTTACAAGAAACCTGGGCAAGGATATTCTCTGAATGGTTGCCTTCATCTGGTTACCAAGTCGTTGCAGCACCAGAAATTTCGTTTACGCAATATCAAGGACCAGCAGAAGCTAAGTATAGTGAAATCTGGCTCGCTGTTACAGCTACTAAATAAAGAAAACCCACCATTGAAAAATGGTGGGTTTTTCCGCCAAGAAGGAGAAAGTTTGGTATAATAAACGTGAAGAAAAAAATCAGACCTTCTAAACTGAAATCTAGCTATGGATAAGTGATGCGAATACGGAATCATGGAGAAAAAATAATTCTCCGAG # Right flank : CAAGAAATTGCATTAAGTTCAAAAAATTTGTTTTAGAGCCATGTTGTTAAAAAACAAACTATCACCACAAGCAATCCGTAATTTTCATCACAAGATTAGAATTTTTATCATCAAAGACGAGCTGCTTCGATTTTCGAAAACTAATCAAGTGATAAGTCAAAATGTTGATAGATTGAGATTAGTTCTTCCTTTTTTTAGGAAGGGCTTTTTTTATTGATAGAAGAAAGGGAAGAAATCTTGGGAGCACCTAAAAAAATTGTGAGAAATGCTTCTGTATTGTTTGGTTTCTGCCTCAGAAAGTTGTATACTTAGATTGGAATTATTCTATATTACATGCATTTTCACACTTTTTGGAAAAGTTCACTTGAATTTTCTTTTAGTTTCGTAGATAAAAGGAGTCATCGCTAATGGAAATGAACAATTCAGGTAAGCTTGTTTCTTTGTGTGGAGGCAAATCAGGGAGGAAATAATATGTTTGATATTGTAACATTGGCGAGAAT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTAGAGTCATGTTGTTTAGAATGGTACCAAAACT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,4.5 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //