Array 1 22262-23855 **** Predicted by CRISPRDetect 2.4 *** >NZ_JMPM01000102.1 Leclercia adecarboxylata ATCC 23216 = NBRC 102595 strain ATCC 23216 GLAD.assembly.105, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 22262 28 100.0 33 ............................ ACGGTGAACGCCGCGCTGTGCTCCTCTTTCCAG 22323 28 100.0 32 ............................ AGTTCGAGCTGCCCGGCAAGATGGATGACCTG 22383 28 100.0 33 ............................ GCGCAGCTTGCGCGGTTCATAGAGCGGCAATGG 22444 28 100.0 32 ............................ AACCGTCTGAAAGCTCTGACTTACCAGACCAA 22504 28 100.0 32 ............................ GTCAAGCACTAATAGCTAATTTAGTCCGTTTC 22564 28 100.0 33 ............................ CTGGTTGTAATACTGCTCAAATAGCCCAGCCTT 22625 28 100.0 32 ............................ TAACAGGGTTCGCATGCATATCAGTAATAATA 22685 28 100.0 32 ............................ TTCGGGCCTTTCAGTTCTGTCGCGTGCTCAAC 22745 28 100.0 32 ............................ ACATACCCGGCCACATTCAAGATAGACAAGGA 22805 28 100.0 32 ............................ TTTTCGGTGCCTTGCCATCAGCAATGCGTCGC 22865 28 100.0 32 ............................ AGTATCCCCACAGCTTGAGAGGCGGGATTGTC 22925 28 100.0 32 ............................ CTTAAAGACAGTAAAAATTTACGGTGGAAAAT 22985 28 100.0 32 ............................ ACGCACCAGCGCACTCGCTTTCTGGCCTCGTC 23045 28 100.0 32 ............................ GGATAATGCGTTACCAGTCAGGCTCACCGCTC 23105 28 100.0 32 ............................ TCCCTGAAGCATGGCGGCGCGGCAGGCGTTCC 23165 28 100.0 32 ............................ CAGGTATTTCAGCGACAACCACAGAAGCGCGT 23225 28 100.0 32 ............................ TTCACATGACAAGTCGATAAAAGGGAATGACA 23285 28 100.0 33 ............................ AGCAGCGGCGCTGAGCGTGACGCCGGGCTGGTC 23346 28 100.0 32 ............................ ATGGTAAAGGCGACAAATCCAGCCAACCCTAA 23406 28 96.4 33 ...............T............ AATGTGGGGATGACTTGCGCTCGGAGCACAGAT 23467 28 100.0 32 ............................ AAGAATGCTACTGACGCCGCCGGCAACTCCTG 23527 28 100.0 33 ............................ CATACAAAGGGCCGTAGTGGTGTTGTTCACTAC 23588 28 96.4 32 .............A.............. TGGCTGTACCCGTCTGCATCGAGACGCGCAGC 23648 28 100.0 32 ............................ GCCCGGGTTGAGCGTAGACTTACCTTCTGTTT 23708 28 100.0 32 ............................ ATATTCACGGAGAGCTTTGGCGCTTCGTCAAT 23768 28 100.0 32 ............................ TGACGAAGAATGCCCCGTCTGTTAAGGAGGGC 23828 28 96.4 0 ...............A............ | ========== ====== ====== ====== ============================ ================================= ================== 27 28 99.6 32 GTTCACTGCCGTACAGGCAGCTTAGAAA # Left flank : GGCCGCGCTCGGTAAACTCGAAGAGAGCCGATGGCGAGCGGGCTTGAATGATTACTGTCGTGCGACGGCGATCCTGGCGATACCCGCCAACACTGGCTGGCGCGTGGTCAGCCGTGTGCAGGTAAAAAGCAGCGTTGAGCGTCTGGTTCGTCGTTCATTACGTAAGGGCTGGATAACTGAAGAACAGGCGCAACAGCGAATAGCGGAAGGGAAGGACAAGCGTTGTCATTTGCCATTTTTACCGCTTAGAAGTTTGTCTACGGGTCAGAGCTTTAAGTTATTTATCCGCCACAGTGAAATACAAACGGCGCCAGTAAGTGGTTCGTTTAGTAGCTATGGCCTGAGTGACACGGCAACAGTCCCCTGGTTTTGACCCTTTTTTTCGTGATTTTATAACTCGTTGATTTTTAATGGGGGATAGTGACGGTCAGAAAAAAGGTTTAACGCTTGAAAAGGGGGGTTATATAACAGGATCATAGGGATAGGTACTTTGGGTTCCA # Right flank : AAAAGTGGCCCCCGATATCGAGGAGCTGAAATCGTTCACTACCTATTCCATTGCCGATTCGGTACAGGCACCCATTTTTTTGCCCCGCCTGACTTATCGCCAGGCGGGGCATTTTTACGTCCGCACCCGCTCAACCGTCTCCTGCCAGGCTTGCCAGCGGGTCTGCAGTCGGGCGTGGCGCGCCATATCCGGGGTAAAAGTGACATGCTCCGGCAGATACTGTCGCAGCTGCGTGGTAGTCAGGTTAAACAGCGCCTTACGGGCCAGCAGGGCGGCCCCCATGGCTGAGAGTTCCGGCACGTCACTGCGCATCACCGGGCAGCCAAGCAGATCCGCCTGGTACTGCATCAGCCAGTCGTTTTTCGTCGGCCCGCCGTCGACCATCAGCGCATTCAGCGTAAAGCCCGGATGGACGCGCATCGCCTGCACCACGTCAGCAATCTGATAGGCAATTGCCTCCAGCGCCGCACGGATCAGGTGCGCCCGCTTCACGCCCCGGC # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGTACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //