Array 1 78099-78861 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JAASIV010000003.1 Bifidobacterium pseudocatenulatum strain K40_2 scaf_3, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                    	Spacer_Sequence                         	Insertion/Deletion
==========	======	======	======	===================================	========================================	==================
     78099	    35	 100.0	    36	...................................	AACGGTGAAGCTGTGGCCCGCGAGGGTGCTGCCATC    	
     78170	    35	 100.0	    37	...................................	ACGCAAGCCGGACGGCACGGCCACAGGCAAACGCGGC   	
     78242	    35	 100.0	    37	...................................	AAAGAGCCCGAACACCCTGTTCGGCCTGATCCCGCTC   	
     78314	    35	  97.1	    40	.....................A.............	ACCATCCACATGGAGCAGGTCTACCTCTGGACCCGCCGCG	
     78389	    35	  97.1	    38	..........T........................	ACAAGCAGGATCTTGTTGCCGGACGCTTTGAAATCAAG  	
     78462	    35	  97.1	    37	..........T........................	ATTGTCGGAGTACGTGATGGTGAACTGGTGGTTGGCG   	
     78534	    35	  97.1	    38	..........T........................	GACGATCGGCCAAACCTTGGTACGCGAATACACTTGGT  	
     78607	    35	  94.3	    35	..........T.G......................	GACTGTCGTATGTTCGTAAAATGGTTCAGCCAGAA     	
     78677	    35	  94.3	    40	..........T.............A..........	CAGGAAAACAGTTAGACGCGATGCTCATCGGCTCGAAGCC	
     78752	    35	  94.3	    40	.........T.....G...................	TGACATGAACGGCGGAACGGGCGGGCCGAAGCAGGAGAAC	
     78827	    35	  94.3	     0	....................TA.............	|                                       	
==========	======	======	======	===================================	========================================	==================
        11	    35	  96.9	    38	ATTCCTGAGCCAATCAGCTCAGGACTTCATTGAGG	                                        	       

# Left flank :   GATTGGTTGCGCGAAAAAGGCGTGTGTGCCTGCGTACTGTTCAACCAGTTTGTTTCCGACAACGCTAGCGCGCCGGAACGTTGGCTTGAACCGGGAGAAATAATTCCTCTGTAAATGCGAAGAATCGGAGAAAAACATGGACGATGACCCCATCCCGATTAGTTTGGTTGGAAAAGAAGAGCAGGCGAGAGAGGGAATGTCGTTCTTAGAGCGACGGGGATATAGTGATTTAACCATTCCGACGGTCATTTGATTTCACGTTCGTTCCTCTGATTGTTTTTCATTTATGTGATTGTGGCTTGATAATTCAAAAGTGTTTTGTGTTTTTCGAAACGCGAGAGGTGAATCATTGTTGCGACACGCGATGATCTCTCGCATGGGGAAATATAAGGGTTTACTTCTCTTTTGTCAGTAATAGCTGACTGGAGGAGGCAGGTATCCGTTCTGCTCTCGCGAGGTTTTTAATTCGCTCAGTCGATAGAACGGATTAGAGTGAAACC
# Right flank :  GATCGGAGGATAACGAGACAATATTTTCAATTTCTGATGTAGCATTAGCGTGTATGGTGCTGAGAATTGATGAGCGCGACTTGAAGGCGAAGCTCAATGAGCGCAAGAGCTTTATCGGATATGGTTCCAAGGGTGACGGTATCGCCAACATTGTTGCAGGCTTATTCTATATTCCAACGGCATGTACGTTTACGATGTTGCCGACGTGGGCGCGATATTTGTTCGCTGTATTGGGTGTTGTGATAATCGCGTTGGGCGTCGCGAGTATTGTATGCAAAGGACTCACTTCCGAAAAACTATATAAGGAAATCGAATCGATGGACAGAAGAGCCAGTTCTCTCATTGCGGTCAAGGATGGCACGGATGTGCTGTCCAATCGGTATCTGACGTATTACGACGAGCGGTGGAATTGTTGGTTCCTTCCGAATCATCGTTCATTTGATTCGTATGAGGAAGACAAAAGAAAGTTTTCGTCATATCTTTCGTCGGAATTCAAGATT

# Questionable array : NO	 Score: 2.56
# 	Score Detail : 1:0, 2:0, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.45,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     ATTCCTGAGCCAATCAGCTCAGGACTTCATTGAGG
# Alternate repeat :   ATTCCTGAGCTAATCAGCTCAGGACTTCATTGAGG

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:51.43%AT]
# 	Reference repeat match prediction:         NA 
# 	Secondary Structural analysis prediction:  R [-5.90,-7.00] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      F [1-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [53.3-61.7]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [0.41,0.37   Confidence: LOW] 

# Array family : NA
//