Array 1 22045-23466 **** Predicted by CRISPRDetect 2.4 *** >NZ_SSWT01000007.1 Streptococcus agalactiae strain W8A2 NODE_7_length_136549_cov_84.511047, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 22045 36 100.0 30 .................................... AAACTAAAGATATTGACTCCCTGCAGGATA 22111 36 100.0 30 .................................... AACATTAGCCTTTTCTAACTCTTCAGCTGT 22177 36 100.0 30 .................................... CCGTCAAACAAGAGCGACAGCGAAACAAGC 22243 36 100.0 30 .................................... TTTTATTGGTTTTCTAAGTGCTCGACCATC 22309 36 100.0 30 .................................... AGTTACTTCTGCTTGGGTTTGATAAGGGTC 22375 36 100.0 30 .................................... GAAATGTGGAGTCATTCAGGTTGATGATGG 22441 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 22507 36 100.0 30 .................................... AAAAAATAAATGACTTTAAAGCACTTGGAG 22573 36 100.0 30 .................................... TAGTAGCCATTATTATTATGGCTTTTATTT 22639 36 100.0 30 .................................... GGATGATTTCGATTATGCGGCGGTGGTTGA 22705 36 100.0 30 .................................... AAATGTTAATTTCATATCTACATCTTGTTC 22771 36 100.0 30 .................................... TTATTTAAGACGTGATTTAATGTTAAAACT 22837 36 100.0 30 .................................... CAAACTATCTTGATTATAAGTGGACTGATA 22903 36 100.0 30 .................................... ATTTTTACACGAGTGCTAGAAAACGGGGCA 22969 36 100.0 30 .................................... ACATTTGTTAAATTTGAACTTACTGGAAAT 23035 36 100.0 30 .................................... TCCAAAACAAATACGAATGCTTGAGCGATA 23101 36 100.0 30 .................................... GATTACCTTAGATGATGTTCTAATCGGTAA 23167 36 100.0 30 .................................... TTAACAGTTTCAAGTCTGTCTTGTTACTTA 23233 36 100.0 30 .................................... ATATGTTCCACTCTATGAATTTAGGCTCAT 23299 36 100.0 30 .................................... TTTTTACCAATGCTTCCATATCGCTTATAT 23365 36 100.0 30 .................................... TACTTGACGAATTGAAGATGACGGAATTTA 23431 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 22 36 100.0 30 GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Left flank : CGAAAAGCCAGAAGTGAAATCAATGGTAGAAAAATTAGCAGCTACTATTACAGAACTTATCGCATTTGAGTGTCTAGAGAATGAGCTTGATTTAGAATACGATGAAATTACGATTTTAGAACTCATTAAGGCACTGGGAGTCAAAATTGAGACACAGAGCGACACTATCTTTGAAAAATGTTTTGAAATTATACAAGTTTACCATTATTTAACGAAAAAGAATCTCTTGGTTTTTGTTAATAGCGGAGCTTATCTTACCAAAGATGAAGTTATAAAATTATGTGAATACATCAATTTAATGCAAAAGTCAGTACTCTTTCTAGAACCTAGAAGACTCTATGATTTACCGCAATATGTTATTGATAAGGATTATTTCTTGATAGGCGAAAATATGGTATAATATTAGTAAAAGCACAGTAATAACAAGGAATCATCGAAACTGAAGTCCTGCTGAGACGAATGGCGCGATTACGAAAGCTCAAAAGAAAATTTTCTACGAG # Right flank : CAAGCTAATTCTCATCTCACCGAGATGGATAGTTTTAGAGCTGTGCTGTTATTATGCTAGGACATCATTGTGGTGTTCTAGTTTTTTGTTATACTGAAATAAATTTTCAGAGAATGTGGGGGAAGGCGGTAATTAGATTAATTCAAGACGTAATTCAGAACTTAGTTGGCCAAGCTAACGAAATCACCCCAATTTATCAGTTTGATTGGGAAACTTATATATTGGCGACTAAAAAATATGAACGTCATTTAGAGGTGTGTCTATTAGTAGAAAATTCGAATTGTTTTTCGGATTCAAAGAGAATGTGTCAATAAAAGAGATATGAAAGGCTATAATTCCAACCTTATGGTTAAAGGGCTAGGTTGTTCTACGCTTTACTTAATTATTAGTTTGACAGCGTTGGTTCTTTTAGTGATTGCTGGTGTTTTCTTTGTCATTAATACTTGCAAGCTTACAAGGAAAGCAGTGGAGAACCTATCCATAATCAACTAACAGCTATG # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:58.33%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTGTGCTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.87,0 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //