Array 1 357830-359114 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_JTKQ01000009.1 Staphylococcus pseudintermedius strain 9841787-1 contig_9, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence                	Insertion/Deletion
==========	======	======	======	====================================	===============================	==================
    357830	    36	 100.0	    30	....................................	AAATGTGAGTGTAGATGTTACATCTTTCAC 	
    357896	    36	 100.0	    30	....................................	AAAGAACTTACCAAAACCTTTCTTTGTTTC 	
    357962	    36	 100.0	    29	....................................	GTTTTCGTATATCTTTTAGCATTTGTTAC  	
    358027	    36	 100.0	    30	....................................	TCATTGTGGATATTTTCAAGCAGTGCTTCT 	
    358093	    36	 100.0	    31	....................................	GTGTGTCATCAGACTTTACACCTTCAAATAC	
    358160	    36	 100.0	    29	....................................	GAACTCTTAAAGTATCTTTTAGGACACTT  	
    358225	    36	 100.0	    30	....................................	AAAGATTATGCCATCTTCAGTTACTTTAAC 	
    358291	    36	 100.0	    29	....................................	TCGTTTTGTGATAACAAATCAAGTGATAT  	
    358356	    36	 100.0	    30	....................................	GATTATGGTGTCGAATCAAAATCAAATTAC 	
    358422	    36	 100.0	    30	....................................	GATGAGAGGTGTAAAAGCACAATTGCATGA 	
    358488	    36	 100.0	    29	....................................	TATACGTGCAAACGGTTCTCTTTTAATTT  	
    358553	    36	 100.0	    30	....................................	CGGCACAGATTGTGTGATTTGTTGACCTGC 	
    358619	    36	 100.0	    30	....................................	TCAAAAGTATTTCGTCGAGATGGAGCGACT 	
    358685	    36	 100.0	    30	....................................	TGAAGATTTTCCACGCCAATGTATTTTTAT 	
    358751	    36	 100.0	    29	....................................	TAAAATCAGAAACAAAAGGGCAAGCGGTT  	
    358816	    36	  97.2	    29	............................A.......	GTTAACTGAACTCGAGTGTTGGCGCTTGA  	
    358881	    36	  97.2	    30	............................A.......	ACAGGCTTAAAGAATCATTACAGTTTGCTA 	
    358947	    36	  97.2	    29	............................A.......	AGTAATGATTTAGAAAAGCGTGAGCATAA  	
    359012	    36	  97.2	    30	............................A.......	GTTATGATGTTTGGCGATATGGGTCGTCGT 	
    359078	    35	  83.3	     0	T........T................-.CA.C....	|                              	TC [359110]
==========	======	======	======	====================================	===============================	==================
        20	    36	  98.6	    30	GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC	                               	       

# Left flank :   TTTTAATTATATTATTTCCGTAATCACATCTTGGCATACACGATATTAAAAAGTTTATACACCTTATAAAGAGATATAAATTTACCACGATTATTTTTACTAATCATCCTTCTATCATTATTAACGAGGAAAACATATTTCTTTGTAAAAGTAATAAGAAGTGCCACGACATCGAAAAAATATATGAAGAATTAATGTTATTTGTTCCTGAAGAAGTAGTGAGTCATCAATTAGTTAACATGATTGCATATCACGAATTCGTTGGTGAAAACCTTTCCGAGTATGAGCGATATTTTAAGTTTATCAATCATTACAATTAGGCTATACTATATTTAACATTATATGATAGAGAAAAGTTGATCCAACGATGAAGTAATGACTATGTGACTTCATTCGTGATGAAGAGGGTTAACTTTATCATCGAGTATCATATCTGACTTCTTTTAATAGTGCCAAGCCTCAATTTTGAAAAGGATTGAGTTAATATTTTTGGATTTGAG
# Right flank :  CCTTCTTTATAATCGTACATCAACCTCACTATGCTTTCAAAATAATTAAGAGGCATTGTGGGCTTTTTGTGTTTATACGAAATGTTGTATGAATCTCTCAATCGTGCCACCATGTTATAATAGGTATAAATTGTTCATAAAAGATAAATAGAAAGTAGGGGAAATCTATGGAAGCAATTATTGCAACTCAACCGTTCCAATTAGCAGAAGGTCAAAAGTTTGAAAAAGTATCGCGTGAGCTCCCAACACCAGAGGCACATGATATTTTAATCAAAGTGTACGCAACAGGGATCAATCCGGTTGATACGAAAATGCGGCAAGCCCCGTTAAATGCTGAGGCACGTGTCCTAGGTTTTGATGCGGCAGGTGTGGTTGAAGCGGTCGGCGATGCGGTTACGGATTTCAAACCGGGTGACCGAGTATATTATTCAGGATCGAATCAACGAGATGGCTCAAATCAGACGTATCAGCTCGTGAATGAAAATTATTTAGCGCATATG

# Questionable array : NO	 Score: 6.19
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:72.22%AT]
# 	Reference repeat match prediction:         F [matched GTTTTAGCACTATGTTTATTTAGAAAGAGGTAAAAC with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.20,0.00] Score: 0/0.37
# 	Array degeneracy analysis prediction:      F [0-8] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.91,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
//