Array 1 15223-14605 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXCI01000053.1 Clostridium sporogenes strain IFR 18/115 contig00053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 15222 30 100.0 34 .............................. CCTTCTACGCGTTACGGTGTGTTGTAGCCTTTCG 15158 30 100.0 34 .............................. CCCGTTATGGATATCTATATACGATGTACACGAA 15094 30 100.0 34 .............................. GCTATATTATAATATTTGTCCTTAGCTTCTTTAT 15030 30 100.0 36 .............................. TGTTGTTATAAGTACCTAATCTTGTAACTACTGTTA 14964 30 100.0 36 .............................. ATGTAATATGTTCCTACTCCCAGTACCGTTCTATTA 14898 30 100.0 36 .............................. AATAAAATAGAGGTGCGGAAATCGCTATTTATTTCA 14832 30 86.7 36 G.......GT.....A.............. AATTGTCCAACTTTTCCATCTGGAATTGCTGGATTT 14766 30 86.7 35 G.......GT.....A.............. GAAGCTTCTGTACCGTAAACGATAGAGCCATCTTC 14701 30 86.7 37 G.......GT.....A.............. TTGTTAGCCATAAAATTTTATCTATATAATTAAACAT 14634 30 83.3 0 ........TT.....AG............C | ========== ====== ====== ====== ============================== ===================================== ================== 10 30 94.3 35 ATTGAACAACAACATGAGATGTATTTAAAT # Left flank : TACTTTAGGAAAAGTTATAAAGTTGAACAATAACATGAGATGTATTTAAATTTTATTAAGTCCTCAAAATGCTTTCCATACGTTTCAGTTGAACCTTAACATGAGATGTATTTAAATTTGTATTCATTTATTGTATTCTTAAATACATTCTCGTTGAACATTAACATAGGATGTATTTAAATCCATAAATATCTAATACAGAAAACTTAGAAGATACATTGAGCAATAACATGAGATGTATTTAAGCAGAGAACTTTAATATGTAATTTGGTGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGTCATTGATATATAAGGCTTAGGATAGGTTTTTGTTTTATATTTATTAAAAAACATAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTGTTATG # Right flank : AAATTAAAATCCATGATTTTTTTCCTTCAAAGTTGTTTAGTTTTTAGAGCGTGGTATTTTATTTAATTGTATAAAGTACATTAGTTAAAACTTATTTTTTCAAATGTACCCTTTTCTATGTGTAATTCAATATCAATATCTGCTTTTTTATAACCTACTAATTTTATACGATTATTACCTTTTTTTATTGGTAAAGTTAATGATGTTGTTCCTTTCATAGTGGCTTTATCTGTATTTTCTACAAGATTAACAACCGTATTGTCAGGAGATATTAAAACGATTTTTGCCTTTCCACTTTTTACTGATAAGATATATGGAACTTTCAAATCAAAATCAGATCTGTTACTTTTACTTATAACTGCATCATTTATATTTGGCTAATATAAAATTTATCGTAGTTTTACTTATTACCATAGTTTTGTTTCTTTGTCAAAAAGCAATGAATCATAAATTAAATTAATAAATCTAGAAGATTTAACGGTGTTAAACTTCCTATGCCT # Questionable array : NO Score: 5.97 # Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACAACAACATGAGATGTATTTAAAT # Alternate repeat : GTTGAACAGTAACATAAGATGTATTTAAAT # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-73.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA // Array 2 16092-15476 **** Predicted by CRISPRDetect 2.4 *** >NZ_SXCI01000053.1 Clostridium sporogenes strain IFR 18/115 contig00053, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ==================================== ================== 16091 30 100.0 36 .............................. AGGAGATGAATTAGAATTAGTATTAGAAGGTGATGA 16025 30 100.0 34 .............................. CAATAATTGCAAAGGAAAATAATAAGCTAAAAGG 15961 30 100.0 35 .............................. TCATTTTGTGAAAATATATAAATGCATACAGTATC 15896 30 100.0 34 .............................. CAGAGTATTATAGGTTATGAATGGGTTACTGAAT 15832 30 100.0 35 .............................. GAAAATGAGCGTAGAGCAAATGAAGCAGTAGAAAG 15767 30 100.0 36 .............................. AGAAACACCTTCTATTACTTTAGGAAAAGTTATAAA 15701 30 100.0 36 .............................. TTTATTAAGTCCTCAAAATGCTTTCCATACGTTTCA 15635 30 93.3 35 .......CT..................... TTGTATTCATTTATTGTATTCTTAAATACATTCTC 15570 30 90.0 35 ........T......AG............. CCATAAATATCTAATACAGAAAACTTAGAAGATAC 15505 30 86.7 0 A....G......................GC | ========== ====== ====== ====== ============================== ==================================== ================== 10 30 97.0 35 GTTGAACAATAACATGAGATGTATTTAAAT # Left flank : AAAAGCCTACATTCATGTGTTTACTTTGTTTTTTGTAGTAAATATTTATGATATGATTGTTCTAGATATAGGTCTTTTTTGTCACAGTAAAAAAACTAGAATACCTGGTACAGAAGATATGGATAAAGAATATAGAAATCCATGGCATCATATAAAAGGAGCTGGTATTGGAACTATAATAGGTGCTGTAGTAGCATTATTATCTGGAGGAATGGTTCATTTCATATCAATAATATAGTATTTAAGCAGAGAACCCAAATCTACGATTTGGTGTGAGTCACTTACTTCTTTGAGGCAACGAGAAGGAGTTTTATAAATTGAATTTTCCCAGGCGTAATAAATTTTAAAACCTATTCTAGCTATTGAAATATAAGGCTTAGAGTAGGCTTTTATTATGTATTTATAAAAAATGGGAATCGGTTGGAAAACTTTTTATAAAACCTTGTAAAATCAATAGTTGTATGATATTCTTAAAAATAAGTAATGGCTATTTTACTATG # Right flank : AGAGAACTTTAATATGTAATTTGGTGTGAATCGCTTACTCCTTAGAGGCAACGAGAAGGAGTTTCATAAATTGAATTTTTCCAGGCGTAACAAATTTACAAACCTATTCTAGTCATTGATATATAAGGCTTAGGATAGGTTTTTGTTTTATATTTATTAAAAAACATAATCACTTGGAAAACTTTTTCTAGAACCTTGTAAAATCAATACTTATATGCTATTCTTAAAACTAAGGAATGGCTATTTTGTTATGATTGAACAACAACATGAGATGTATTTAAATCCTTCTACGCGTTACGGTGTGTTGTAGCCTTTCGATTGAACAACAACATGAGATGTATTTAAATCCCGTTATGGATATCTATATACGATGTACACGAAATTGAACAACAACATGAGATGTATTTAAATGCTATATTATAATATTTGTCCTTAGCTTCTTTATATTGAACAACAACATGAGATGTATTTAAATTGTTGTTATAAGTACCTAATCTTGT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACAATAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [61.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA //