Array 1 87378-88595 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCN01000003.1 Chitinophaga sp. CF418, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 87378 30 100.0 36 .............................. CATGTCATCAGCGGCTCAACCGCCTTACTGAATCCG 87444 30 100.0 36 .............................. ACTCAGCTACTTATACAAGCGGCGCGCCGTATGGCT 87510 30 100.0 36 .............................. ATCAAGGGCTTTATTTAACCCAAAAGACCTGGGATC 87576 30 100.0 35 .............................. ATGACTATCACAGTGAAGAAAGAAATCGAATTAGA 87641 30 100.0 35 .............................. AACTTCCACGTCCCCGGCGTCGAACAGTGTGCACA 87706 30 100.0 34 .............................. GAGCTTGAGAGCCGGTGGAGCGCCGGAAGGAACG 87770 30 100.0 36 .............................. CCTTCTTTCCGGATGAAATCTATATTCCCGCTCTAG 87836 30 100.0 36 .............................. GATAATGTATCCAACAGGTTCCGCCGCATCGTGCCT 87902 30 100.0 37 .............................. AAGAAAAGGCCGCTAAGGAGGCAGCTGCCTCCGCAAA 87969 30 100.0 35 .............................. CGATGTGAACCGGAGACAGAGGATTATTTTATCTG 88034 30 100.0 36 .............................. GGAATCCTTTCTGCGGGATCTTATGCGGCGCCTTTA 88100 30 100.0 36 .............................. ATTCTTCCAAGCCTGGTTCAAACCATGCCGGGGTCA 88166 30 100.0 36 .............................. ACCACAGCCGCTGCCGCTCGTGCATAAACTCGACAG 88232 30 100.0 37 .............................. TTAGCTGACACGCCTCAACAAACCACGGCAGTACCTT 88299 30 100.0 36 .............................. CTTTTGCCGGTAAGAGATACCCTGAAATGGTGGTAC 88365 30 100.0 37 .............................. GAGTATACTTATATGATGGGTAAAAAAGGGAAATGGA 88432 30 100.0 37 .............................. TAGCTTGTTTGCAGCAAGAAGTGCTCAGCTTGTACTA 88499 30 100.0 37 .............................. CAGCAAGCGAAGCGCTTTCATATTCAGCAATAAAATT 88566 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 19 30 100.0 36 GTCTGAATTGTACCGTAGAGGAATTGAAAC # Left flank : AAACCTTTTAAAGCGTGGTGGTAATTTATGTATATCATACTTGTATACGATATTGAAGAAAAGAGAGTGTCCAAAATGCTTAAACTTTGCAGAAGATACCTACATTGGATCCAAAACAGCGTATTTGAAGGAGAATTAAGTCCAGTGCAACTAAAGGAACTCATTTTTGAAGCTGAGTTAATTATGGATACCCGGAAAGACAGTCTCATTATCTTTAAAACCCGACAGGAAAAATGGCTGGAAAAGCAGGTCATTGGTAAAGAAAAGAATGAAGTTGACAATATGTTGTAGGCGTCGAGGTTAATAATATCTTTGAAGTCCTGCCCCCACAGGCTTATGTCTAAATACACAATACAATAATTATCAAATAGTTGGAATCATCGTCTATGTCCAGCAGAAATTTTACTTTTATAGGTGGACGACTTGGGAGGGGTGAAAACTGCGTTTGAGGTTAGATTATTTCATTGATAATTAGATATTTGAACTTATTTTTTAAGCGG # Right flank : CANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAATTGTACCGTAGAGGAATTGAAACAACCAGTTGTCTTTCGAGGGGCTGATCACCACCTTGTGTCTGAATTGTACCGTAGAGGAATTGAAACTGCATCGCCCCATGTGCCGCCAGCCCAGTTAGTCTCCAGTCTGAATTGTACCGTAGAGGAATTGAAACTATGAATATCTGGCAAAGGAACCTATTCGTAAGATGGGTCTGAATTGTACCGTAGAGGAATTGAAACGATGGATATTGCTATTTCCCTAAGCGAGAGCCATCAGTCTGAATTGTACCGTAGAGGAATTGAAACAGATTTACTGTCCATTCCCCCCTGTCACTGACGTCTGAATTGTACCGTAGAGGAATTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAATTGTACCGTAGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [73.3-1.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 2 88772-89064 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCN01000003.1 Chitinophaga sp. CF418, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 88772 30 100.0 38 .............................. TGCATCGCCCCATGTGCCGCCAGCCCAGTTAGTCTCCA 88840 30 100.0 37 .............................. TATGAATATCTGGCAAAGGAACCTATTCGTAAGATGG 88907 30 100.0 36 .............................. GATGGATATTGCTATTTCCCTAAGCGAGAGCCATCA 88973 30 100.0 32 .............................. AGATTTACTGTCCATTCCCCCCTGTCACTGAC 89035 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ====================================== ================== 5 30 100.0 36 GTCTGAATTGTACCGTAGAGGAATTGAAAC # Left flank : CGCCTCAACAAACCACGGCAGTACCTTGTCTGAATTGTACCGTAGAGGAATTGAAACCTTTTGCCGGTAAGAGATACCCTGAAATGGTGGTACGTCTGAATTGTACCGTAGAGGAATTGAAACGAGTATACTTATATGATGGGTAAAAAAGGGAAATGGAGTCTGAATTGTACCGTAGAGGAATTGAAACTAGCTTGTTTGCAGCAAGAAGTGCTCAGCTTGTACTAGTCTGAATTGTACCGTAGAGGAATTGAAACCAGCAAGCGAAGCGCTTTCATATTCAGCAATAAAATTGTCTGAATTGTACCGTAGAGGAATTGAAACANNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNCTGAATTGTACCGTAGAGGAATTGAAACAACCAGTTGTCTTTCGAGGGGCTGATCACCACCTTGT # Right flank : CNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTCTGAATTGTACCGTAGAGGAATTGAAACATGTCAACAGCTTGGTGTATTTTTTACCGACATCTTGTCTGAATTGTACCGTAGAGGAATTGAAACACATACGTGATCATCGAATTTTTTACAAATGACAACGTCTAAATTATACCGTAGAGGAATTGAAACTGCTTTGGCTTTCAACTTTAATTCCAGTTGGATATGTCTGAATTGCACCGTAGAGGAATTGAAACTGGCTACCGATCAGCACAGGATTAATGCTAAGTGCAAA # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:0, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCTGAATTGTACCGTAGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [53.3-0.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : NA // Array 3 89300-90207 **** Predicted by CRISPRDetect 2.4 *** >NZ_FRCN01000003.1 Chitinophaga sp. CF418, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================================ ================== 89300 29 100.0 37 ............................. ATGTCAACAGCTTGGTGTATTTTTTACCGACATCTTG 89366 29 100.0 37 ............................. ACATACGTGATCATCGAATTTTTTACAAATGACAACG 89432 29 93.1 36 ...A....A.................... TGCTTTGGCTTTCAACTTTAATTCCAGTTGGATATG 89497 29 96.6 38 .........C................... TGGCTACCGATCAGCACAGGATTAATGCTAAGTGCAAA 89564 29 96.6 38 .............A............... AGCTGTACTCGGATTTCTTGCGCCTGCACCTCGTCTTA 89631 29 100.0 37 ............................. CAGAGTCGGGACCGGATGTACATTGTATTCTGGAAGG 89697 29 100.0 38 ............................. GTTTATGTTGAGCTGTCAATGAGAACCAAGAAACAGAG 89764 29 100.0 36 ............................. TCTAAATAAAACTTAACTTTCGCAACACCTGAAAAG 89829 29 100.0 36 ............................. TCTAAATAAAACTTAACTTTCGCAACACCTGAAAAG 89894 29 93.1 37 ...............T............A GAGTGGGAAGGGTTGGACGAGATAAAAACTGTCTGTG 89960 29 89.7 60 .............A..T.....C...... ATGTACCGCAGAGGAATTGAAACTCGCACTTAGGAAGGTTGGGGATTGATATGTAATCAG 90049 29 89.7 36 C.............C............G. TTCGGCCTTTATGTTGCTGGAATTGACCCATACAAG 90114 29 86.2 37 .T...........AC.T............ AGATTATCCAGGATAATCTTTACATGCGCAACGGTAG 90180 28 72.4 0 GT.......-C..C..CC..........T | ========== ====== ====== ====== ============================= ============================================================ ================== 14 29 94.1 39 TCTGAATTGTACCGTAGAGGAATTGAAAC # Left flank : ACTGCATCGCCCCATGTGCCGCCAGCCCAGTTAGTCTCCAGTCTGAATTGTACCGTAGAGGAATTGAAACTATGAATATCTGGCAAAGGAACCTATTCGTAAGATGGGTCTGAATTGTACCGTAGAGGAATTGAAACGATGGATATTGCTATTTCCCTAAGCGAGAGCCATCAGTCTGAATTGTACCGTAGAGGAATTGAAACAGATTTACTGTCCATTCCCCCCTGTCACTGACGTCTGAATTGTACCGTAGAGGAATTGAAACNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNN # Right flank : TAACCAAGCAGCCGCGACCTTGCTTGTATCATGGTCTGATTAATTGTACCTCACAGGAATTGCCCCAGAGAAAATACCCCCTGGGAAGATCATCCAAACAACTCCTCTCCCCAACAAAAAAGGCCGCCTCATCGAGACGGCCCTTCTTCATTTCATCTATTTAAAACTACATGCGAATCATCTTCGCACTTTCTTTACGCGTACCAGCCGCATTAACTGTCTTAATAATCCACGTACCCTGTGGCACAGCACTAATATCAATGCTGATCAACTGCTGACCTTTAGCATTACCCACATATTCCTTACGCAGCACAGGTCTTTCGCCTTTAATTCCCCATATCTCTACATAAATCTTCTCAGCTACCGCAGCATTCACCTGAATCTGCAGTGTTGAACCAGTCACAGGATTCGGATAAACAACCAGTGCCTTAGCTACCGGTGCAGGGCTAACAGATTTCACATTTGCAACTGCTACTTTTGCACTGCTTGAACAAGCGCCC # Questionable array : NO Score: 5.55 # Score Detail : 1:0, 2:0, 3:3, 4:0.70, 5:0, 6:0.25, 7:-0.09, 8:1, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTGAATTGTACCGTAGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.07%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-1.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [4-20] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [0.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : NA //