Array 1 690058-689851 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT984887.1 Anaerococcus sp. Marseille-P3915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 690057 24 100.0 37 ........................ TACCATCTTTTTCAAAATAAATCATTGGATATCGTAA 689996 24 100.0 37 ........................ TAAGACTCAAGTTCTTTAAGACTTTTTAGGATTGTAA 689935 24 100.0 37 ........................ AGATGACCTTGAAACTGGGGGTAGTGATAAGGCGTAA 689874 24 95.8 0 ................A....... | ========== ====== ====== ====== ======================== ===================================== ================== 4 24 99.0 37 TACCCGCACACGCGGGGGTGATCC # Left flank : GGCTTGATACAGATATATAATAAAAAAAGCAATGCGCAGAATAGATTTACCTATTCTGCAACATCACCATATTTTATAAAGCAAGATATAAAATTAAACAAAGAAATTGTCAATTTAACAGGAATAAGTGAAGAAGATTTGGCTGATGGAAAGGATGAAAAAGAAGTCCTTGAAGAACTTATGGACTTTATATGTAATTATAAACTAGTAGGTTATAATTTTGCATTCGATATTAAATTTTTAAATACACGCCTTAAACAAAATGGATTACAAATGATAAGAAATCAATGCTATGATCTAATGGAGTATGTAAAAAAAGAAAATTTATTTATGAAAAACTATAAACTTCAGACCGCCTTAAATAAATACGGTATAGAGCATACGCAAAAACACAGAGCCCTAGATGATGCAAGAATAACTGCAATATTATCTAGCAAAGTGAATGAATTTTTGGAAAATATAAAATAAAAGATTGAAAAATAGAGGATAACTTAGTGTAA # Right flank : TAGTTTTGACATAGGTTCTAATGAACAATTAGCTATTTCTAGTGAAATCAGCCCTTAACTAGTTAATTATTTTTGAATTTATTAAGCTTTGAATTTTCGATAGTTTTTCAATTTAGTAAATACATTTTCCTATATTTTTTGTTTTTAAAATATGATATAATAATCCAGAAAGTAGTCAATTTTAGAAATTAGGGAGGTACTATGAAAAGAAATTTTAGGATTGTGGCTATCTCTTTGCTCTGCGGCCTTGTTTTTGTGGGCTGTGGAGCTAAGGGTAATGATGCTAAGGATGTTAAAGTGGATGCGAAAACTGAGTTGGACCAAGTGAATAAGGAAGATAAGAAGAGTTTGACTGTTTTTGCTGCGGCTTCTATGACTGAGTCTTTGACTGAGATTAAGGCTGAGTTTGAAAAGGATAATCCTGGGGTGAATCTTGTTTTTAACTTTGATTCTTCAGGTACTCTTAAAAGCCAAATTGCTGAGGGAGCAGCCTGCGATGT # Questionable array : NO Score: 5.81 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TACCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.30,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [68.3-80.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 1140568-1140118 **** Predicted by CRISPRDetect 2.4 *** >NZ_LT984887.1 Anaerococcus sp. Marseille-P3915, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ======================== ===================================== ================== 1140567 24 100.0 37 ........................ TGCTGATAAGCAGTTTATGAAGTTTATTGAGGAGTAA 1140506 24 100.0 37 ........................ TCGTGGATAGCCTGACTCATAAGCCTAAAATTCGTAA 1140445 24 100.0 37 ........................ TGGCTTAGATATTGAATTTGATATAAGCTTCGGGTAA 1140384 24 100.0 37 ........................ CGCCTGATTTAAGGTATGAGAGAGACCTTGACAGTAA 1140323 24 100.0 37 ........................ TCAACCGAGAAGAAAATTTTTGAAAGTTGTTAAGTAA 1140262 24 100.0 37 ........................ CGCCTGATTTAAGGTATGAGAGAGACCTTGACAGTAA 1140201 24 100.0 37 ........................ TAGATATGAAGGGTCTTTTACTTTGGAAAGATAGTAA 1140140 23 91.7 0 ..................-...T. | ========== ====== ====== ====== ======================== ===================================== ================== 8 24 99.0 37 TACCCGCACACGCGGGGGTGATCC # Left flank : AAATAGATGCTGATGTAGCTCAATTGGCAGAGCAATTGATTTGTAATCAATAGGTTGTAGGTTCAAGTCCTATCATCAGCTCCAAATTTAATCTTATGGATTAATATGCGGATGTGGCTCAGTGGTAGAGCATCGCCTTGCCAAGGCGAGGGTCGCGAGTTCGAATCTCGTCATCCGCTCCAAATTAAATAAAGAAAAAAACCAAGCCTAGCCTATCTTGTGGCTTGCTTGGTTTTTATTATGCGTCATTAGCTCAGCTGGATAGAGCGTCTGGCTACGGACCAGAAGGCCTGGGGTTCGAATCCTCAATGACGCGCCAGCAATAAAAGAGGAATGTCGACTATCGACATTCCTCTTTTTCTTATATCTAAAGATAGACTATAAAATTAATTTCAAAATACAAGATTTATGTGCTACAATAATAGTAGTAAGATAAAGTGGATAAAATCCCTTGATTTTAAAAGTAGGAATGGCTAAAAATAGGGATAATTTTAGTGTAA # Right flank : ACTATAATTTATTTACAGAATGTGTGTTGACTATTAGTATATGAGGATTGAAACCTATATATTTTCATGATTGCACTGGCAAATATTTAACTACTTATATAATTTTTTATTCTTTTATGTTTATTTCGGCATAGAAAAACCCCACCCTCTATATACTGGATTTTGGGGTTCATCTCATAATCACTTTTTAATATAATCTTTTTTATTATTATTTTCATTTTCTATATCGTCAATTATATTATTAACTTCCTGAGTATCTAAAAAAGTAACAAAATTTAGTATGTTTGCAATCATCTTAGATAATTTATAAGGAATACTCTTTTTGCTTTTATTTTTATTTTTATCAGCTTGATACATAGCGATTACGAGGAAAAATATTGTCAATAAAATAAGAATTAAGTCTATCATAACTTCTCCTTTATCTATTATTATCTAACACCTGTCTTATTAAAGTAATTACCCGATAATTATGCTTATAATCATTGGATATTATTATAATG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TACCCGCACACGCGGGGGTGATCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched TCCCCGCACACGCGGGGGTGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-9.30,-9.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-71.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.65 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //