Array 1 278996-275305 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACOFT010000002.1 Undibacterium aquatile strain CCTCC AB 2015119 2, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 278995 28 100.0 32 ............................ GATCAAAGGTTGAAACCATCCACCTGACGCCT 278935 28 100.0 32 ............................ TGTTTGACGCCGAGTGACCGCGCGACTGTCTT 278875 28 100.0 32 ............................ ATTGACCGATGGCACCAACTGGATAGGCGATA 278815 28 100.0 32 ............................ TTGATTGGGTCACACCAGTGGTGCAGGACAAC 278755 28 100.0 32 ............................ TGCGCCGGAAATTGTGAGCAGCCGATGACGTG 278695 28 100.0 32 ............................ ATGAAATTACTTCTTTTGCTACTGTTAACAGA 278635 28 100.0 32 ............................ TGATCGAAGAATTCAGCGAAACATGGGTAAGC 278575 28 100.0 32 ............................ GCTGTACCAGTGAACGAGTGGGTTCAATCTGA 278515 28 100.0 32 ............................ AAGACGTTGAGCAAGTGCGTAGTCACTGGGAA 278455 28 100.0 32 ............................ GCTTCGCGATGCCGCTTGTGCGTTATGCGATC 278395 28 100.0 32 ............................ TCAATTTTGCGATAAGCCTTACGACGAGGTGC 278335 28 100.0 32 ............................ GAAACCAAAAATTCTTACAAGCTGACGACTGG 278275 28 100.0 32 ............................ GGAACAGACAAATTTGCAGGGCTTAATTTAAT 278215 28 100.0 32 ............................ TTTGCAAAATTGGCGTTCTTTGACCCTTCCGC 278155 28 100.0 32 ............................ GACCGCCCTTACCGCTATTAAATCCGCGCCCT 278095 28 100.0 32 ............................ TGTGAAAAACGGCGGATCTGTACGTTTACATG 278035 28 100.0 32 ............................ AGATCAAAACCGATGTGAAAATTACCGCCACG 277975 28 100.0 32 ............................ TACTCTGTTCGTGCGTATGGTTCTGCGTCAGT 277915 28 100.0 32 ............................ CCGCGTTGCCGTTTGACGGGCTTTTTGCGGAA 277855 28 100.0 32 ............................ ATAACCAAGCGACACTCTGAATTGCCGGAAAG 277795 28 100.0 32 ............................ TAACGGCAGCGCGAATCCTAACGGTAGTTCCA 277735 28 100.0 32 ............................ GCAAAGTTTGCGAAGCGCCGCTGTTTAATTTT 277675 28 100.0 32 ............................ TTGTTATGAGCATCAAAATCTGCCCGCGTACC 277615 28 100.0 32 ............................ TTCGCAAGTCATTTGCGGAATCCAATCATTAC 277555 28 100.0 32 ............................ GAGCTTGAAGAAGAAAGCCGCACTAAGCACGA 277495 28 100.0 34 ............................ CCGTTGAGCCAAACACCCATATACGGCTGATCCT 277433 28 100.0 32 ............................ TTCATTGAACTCGCTCCCGTCGCCGCTGCTGC 277373 28 100.0 32 ............................ AACATACGCAAATTACTTTGCGGTTTATGCGT 277313 28 100.0 32 ............................ CAGCGTTGCCGTTTGATGGGCTTTTTGCTGAA 277253 28 100.0 33 ............................ TCATATCGAGCTGAAGGCGAAAACTTCATTCCA 277192 28 100.0 32 ............................ GGTACGGTATAAACACCGGTTGATGCGTTGTA 277132 28 100.0 32 ............................ AGACAGCTTTGGTCATAAAAGACATAGCTGTT 277072 28 100.0 32 ............................ TGAACCTGAGCCATTACCGGAACCAGTACCAG 277012 28 100.0 32 ............................ AGTAAATGTCGTTGTCGGAATTGTTTTTGCAA 276952 28 100.0 32 ............................ AGCACGGCGGCCGCAGTCATGCACTTGATCAC 276892 28 96.4 33 T........................... AATCACCCCCCCCGCAGCAATTAGTGTTTCATC 276831 28 100.0 31 ............................ GATCAAGATGCTGAGGCTATTTGTTTGGACA 276772 28 100.0 32 ............................ TTGTGGTCGAAGTAGGCAACGATGAATGGTTG 276712 28 100.0 32 ............................ TTCCTCGATCAACCGCACCAGTGTTGATATGT 276652 28 100.0 33 ............................ CTTCAGATACGACAACGCCTTCTAGCATTTCAG 276591 28 100.0 32 ............................ TGCCCAATGTAATCGCCGCGATGAAACGCAAG 276531 28 100.0 32 ............................ AGCAAGTTTGGCCGTTTCCTTGCTTCACAAAA 276471 28 96.4 32 ....G....................... TACTATCCGCGTTGCAGCGACGACAAAACAGC 276411 28 100.0 32 ............................ TTCGGGTGAGTTGAGTGACCCACGCTATTCTA 276351 28 100.0 32 ............................ ATAACGATCATGATTGATGATGAAATAAGGAA 276291 28 100.0 32 ............................ TACGTGAAAACTTCACCGGCAAGGCCAACACT 276231 28 100.0 32 ............................ AGCTAGGTGGCTCGGCACTAGGTGAAAATTTT 276171 28 100.0 32 ............................ AGCGATTGTCGGCATGGGAAGGGATCACAAAA 276111 28 100.0 32 ............................ TTCATCAGCAGCCCTTTACCCTGCCCCGTTTG 276051 28 100.0 32 ............................ GCTATGCTGCAAGCCGATACTTAGCAAACCAG 275991 28 100.0 32 ............................ AGACGCAACGGCAAAAGCGATCAAACTGCGTT 275931 28 100.0 32 ............................ TTGCCGGATAAATCCTTGTAATCAAACATGAT 275871 28 100.0 32 ............................ GTTGATAGCATCGCCTGCTTCTGTTCTTGTGT 275811 27 96.4 32 ......................-..... GTGGACACCGGTCTCGTCAATGCGCTTGTGTG 275752 28 100.0 32 ............................ CGTTTGCCGCAGCTTGCTGTTTGCCTGCTGTT 275692 28 100.0 32 ............................ TTTGAAGTACGCGGGGCGTAGAAATAAGCGTC 275632 28 100.0 32 ............................ AGCATGCGATGGCGACTGTGCCAAATCCGAAA 275572 28 100.0 32 ............................ TGATGGCGTTGTTCTTGGCTGGTCATGGTGTC 275512 28 100.0 32 ............................ TTGCCATGTCAGTTCTTTGGATGATGTTTTAC 275452 28 100.0 32 ............................ GACCGGAGCAGGTCGAACGGTTACATTCGGAA 275392 28 100.0 32 ............................ ACGAAAGGAAAACGAAATCATGAAAACTCAAT 275332 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================== ================== 62 28 99.8 32 GTTCACTGCCGCACAGGCAGCTTAGAAA # Left flank : AATTAAAGATCGCTCACACCATAAAAACCAAACTCCAAGTCCTAGATCAACAAGTCTGCAACGGAGGCCGATCTGCTCAATATCGCTTTATTTGGCGTGACGGCGCAACAGTGGCGTACTGCCCCCCCCTACGTTCACAGGCAATATGCGTGACCACGCGAATATGCATCAGTTGGTGTGTCTAGCAAATCTGGAGTCGATGAATGCGCATTACATAACGGAAGGTTTAAGTCAGATTGAACGATTGCAAAAACCTAATGCGCTTGCTATCTCACAAATGACGATTTTGTTACGCGGCACGAATAAGCAACTCAAGTAGTAAGTTCATATTTTTTAGGTGTTCAATCAAAACGGTCGGACGCCAATTGATACCAATCAAATTGCTCTTTAAAAAAATCATATAAAAATCAATAAGTTGCAACATACCCTTAGATCATTGGTAAAAACCGAAAAAATGCGCTAAGTGTTTGTTGCAACTTATTTTTTCTTAGTAGAATGCT # Right flank : TGAAACTCATGCAGCGCTTGCAGACAGATCATGCTCCCCAATCAGCGTCACACTTGACGCAGGAGCACTATTTATTGTGGCAAGGTCATTCAGATCAGAAAAGATTACCTCTTTAGCTATTTTTTGAAAGAATTTTAAGCATCATCAAGGGCATCACTAAATTGAATCGGCCATTGTTGCGGTTGAATTCCTTTGAGTAGATGCTGTATTGCTTCGACGATCTTCATATCGACATGTGGACTGACATTCTGAGGTAACGGCTGCCCGCTTTTTTTGAAGAACCGTTGGAAGATTGGCCGGATATCCGCTTTCTTTTTGGTTTGTCCGGGCAAAAGGCGACAAGCGTCCATCCTCGACACGGCATAAATGAAGCTGGTAACGATGTGACTTTCGGTTGCCCACGGAAATTCAGGCATGACGACGAACTCTAACCAATCAATCACGCTATCGCTCAGTTTAAGATCACGCAAATCATTGAAGCTAATCAGCCAATCTCTATC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCACAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [5,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGCACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-70.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //