Array 1 75643-73937 **** Predicted by CRISPRDetect 2.4 *** >NZ_SHTM01000021.1 Bifidobacterium longum subsp. longum strain MCC10125 contig0021, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================= ================== 75642 36 100.0 28 .................................... CTGAGATGCGCGCTGGAACACGCTCAGT 75578 36 100.0 28 .................................... AATGCGCTGAAATACGGGTTGGCCAACG 75514 36 100.0 29 .................................... GTGAGGGACACCTTCATCCGCATACTGCA 75449 36 100.0 28 .................................... CCGAGGCCGGTAGGGTTGCGTGTCTGGT 75385 36 100.0 28 .................................... GTTGTAATCGGTCATAATAGTTTTCAAT 75321 36 100.0 28 .................................... TCTCCCAGTTGCTGCCCCTTGGCGTCGA 75257 36 100.0 28 .................................... CGTATTCATCGTGGCCTCTTCGCGGTTT 75193 36 100.0 28 .................................... CGTACATGATGGGGTCCTTGACCTTGTA 75129 36 100.0 28 .................................... TTGGTGGTGTTGGGCGTCCGGCGCAGAA 75065 36 100.0 28 .................................... AGGTCGAGCGCCTCCTGCCATCCGGCCT 75001 36 100.0 28 .................................... ACAGTATTATTGTCCTGATATTCATGTC 74937 36 100.0 29 .................................... TCGTCGTCCATCTCTGTACCTCGGTTTCT 74872 36 100.0 28 .................................... TCCATGACCGCGTCCATCACCTCATGCC 74808 36 100.0 28 .................................... CGTTCCCCAGTGGGGTGAGTGTGATGCC 74744 36 100.0 29 .................................... ACCGATTGCAACGCGAATATCCCGGGTAT 74679 36 100.0 28 .................................... TCCTGCAACTCCTCCTTGCGGGCCTTCA 74615 36 100.0 28 .................................... GTTGTTCCGGGAACAACTGGGAACAACT 74551 36 100.0 28 .................................... CTTGCCTCCGTTCTGCATCCAGCTGTCG 74487 36 100.0 29 .................................... GTCGCACGTGGCATGGCATGTTGGCGAAC 74422 36 100.0 29 .................................... TGTTGAGGGGAACCGTATCAAACCTGATT 74357 36 100.0 28 .................................... TGGTTTCCGTGCCGCATTGGTCGCAGTA 74293 36 100.0 29 .................................... TCATGGGACTGTGAGCGGCGGCGGCGTGA 74228 36 100.0 28 .................................... TAGAAGTGCAGATTCCGTTCCTGCAAAC 74164 36 100.0 28 .................................... AGGACGTGCAACGCAAGTATTTCAAGAT 74100 36 100.0 28 .................................... TCGTCGATGTGTTCCAAGAGGTTTGGTG 74036 36 100.0 28 .................................... TATTGTTCGGGTGCGATGGTGATGATCA 73972 36 86.1 0 ..............................TTG.AT | ========== ====== ====== ====== ==================================== ============================= ================== 27 36 99.5 28 CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Left flank : ATTCAACGGTTCCGGTTTGACTATACCGAGCTCATTGAATGATTTTGCGCAGCAATTTGGTTTATATTGCGAAGGCAAAATCGACAGGTTGCAGGTTCCCGAATATGTAGGCGAGTCATGAAACGCGATGAGGACAGTGGCGGCATGTGGTGCTTGGTGATGTTTGATTTGCCGGTCAAGACAAAACGGCAACGGCATGCTGCAACTGTCTTTAGAAATATGTTGCTCGACATGGGATATGGAATGGTGCAGTATTCCGTATATGTGCGGTATACGCCTACGCAATCGGGTAATAGGGCGACGGTCAAAATGATTAAAGACAATCTGCCAGCTAATGGCTTAGTTAGAATTTTGCATATTAGCGATCATCAGTGGTCCACGGCGGCCCGATTTTCTTCTGGAAAACGTGAGATTGAGGAAGAAACGCCTGACTTTCTCACGCTTTTTTGAACGTAGGAGAGTCTGAAAAGATTGAAAAATAGCCCTTCTTGATAGGCTAT # Right flank : GCTGGAATGCTTGGGTTGATTTGGCTGATTTAGCTGTGATGGCCGCTGCGGGAATGGCCCTTGCGCGGTTGGCGGCAGAGGTTGCGGCGCGGATTGCGGCACTGATTGTTGTGCCAATTGCGTCTGCGGTGAAAAATATGGCGACGGCTGTGTCTGACTGTTTATCGGCGGATGTTCCGGCTCAGGTTGTGGCTGGAATGGAGAATATTGCGGTTGCGCCATTGTATGCCCCTGCCCCTTCATTGCCATTTCATTGGCGCATGGCGAGGGCTGAAAACCAAGATGATGAATCCTGCATGAGTTATCCGTGATTCCTGTGCGTTGGTACAGCGCGGAAGGTTGAGCAGCCGACATATGCGGGCTTGTCGGTTCACGCGAATATCGTGGAACACATGACTTCCAATACCCTTCGTATGTCAACCATGTTCCTGCGCACCCTGCGCGAGGACCCCGCTGATGCCGATGTCGATTCAGCCAAGCTGCTGCAGCGCGCCGGCTAT # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CAAGCTTATCAAGAAGGGTGAATGCTAATTCCCAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.56%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.30,-1.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [43.3-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,1.05 Confidence: HIGH] # Array family : NA //