Array 1 25532-27605 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPBD010000004.1 Clostridium tyrobutyricum strain 1001283B150210_160208_G3 NODE_4_length_143963_cov_65.3877, whole genome shotgun sequence Array_Orientation: Unconfirmed Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ===================================== ================== 25532 30 100.0 36 .............................. CTGCTAGTTAAAACTTTTCCTACAGCTTCTATTTCT 25598 30 100.0 37 .............................. AAAATAGATAAGCTTGAATCACTTACAGATAGTAACG 25665 30 100.0 36 .............................. TTTAATTTCCTCCTATTTTCCATCTCCAAATAAATT 25731 30 100.0 36 .............................. TTAGAGATATTGACCAAGAAGCCATCCACTTCTATA 25797 30 100.0 36 .............................. GCAGTTACAGTGAGGGCAAATGTAGCTGATTTACTG 25863 30 100.0 37 .............................. GCAAATATCAGCTGCTTTTGGAATAAAACTTCACCAA 25930 30 100.0 37 .............................. TAGCTACACATATGAATATACATCGGTTGAAATCTAT 25997 30 100.0 34 .............................. TAGATACAAATGCCATCTATGTTATCATCCACCC 26061 30 100.0 36 .............................. AGATCAAACACATATAAATCTTTATTGTAACATCTT 26127 30 100.0 37 .............................. CAATTAAAACCTAAAGCATATAAGTATTGCTCCAATC 26194 30 100.0 36 .............................. GTGGTGACAAGTGGGAAGATTTTAAAAAATCTATAA 26260 30 100.0 36 .............................. AATTTAATTTTTACAATATCCTTTTTGCTGAACATA 26326 30 100.0 36 .............................. TATTTATTATCTACGTTAGACAATAGTCTTGCTAAA 26392 30 100.0 36 .............................. ACACTAGAGAGCATTTAAAAGTTGAAATAAATAAAG 26458 30 100.0 36 .............................. TTTGCAAGTTCTCCTAGTTCCACAAGCAAAGCCAAT 26524 30 100.0 36 .............................. GCGTAATGAACGAACAAATAAATAATTTAAGTACAA 26590 30 100.0 37 .............................. GGAATGGCAATGGAATTTAAAAACAGAGAAAATCCAG 26657 30 100.0 36 .............................. ATGACAATAACTTTGATACGGCAGGAGAGATAGCAT 26723 30 100.0 36 .............................. TCTGATATCTTGGTATCTGACATAGTGGATGCAGAT 26789 30 100.0 37 .............................. TTTATAAATTCTGTTAACTCATTTTGTGTTAGCTCTA 26856 30 100.0 36 .............................. TCGTCAGGTAATATAAATTTTTGCTTTGGGTTTAAT 26922 30 100.0 36 .............................. TCTTGTAGTTTGTATTTAATATCTGTTAATTTTAAA 26988 30 100.0 36 .............................. TGAAAATGATGAAAAGTATATTGAAATAGTAGAAGC 27054 30 100.0 34 .............................. AATAATCAGCAAGCAGAAGAACTATATAAGACAT 27118 30 100.0 37 .............................. CATTTACAGATTACGACCCACTCGAAACATTATCTTA 27185 30 100.0 36 .............................. TTAATTTCTTTGATTATATTTAAGAATATTTCTTTT 27251 30 100.0 36 .............................. TCTGCAATACATATAACTTTGTCATTTAGCTTTAAT 27317 30 100.0 36 .............................. GTATCAAATTTCATCTACAGACGAAGAAGGGGAAAG 27383 30 100.0 35 .............................. CTCTACCGCATGAATACAATTGCTAAAATCATAGG 27448 30 100.0 34 .............................. AAAAAGTCTACAATTGAATCTCCATTCTTCCAGC 27512 30 100.0 34 .............................. TTTTCAAAGCAGTTCTTTTACTTCTTATACTTTG 27576 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ===================================== ================== 32 30 100.0 36 ATTGAACCTTAACATGAGATGTATTTAAAT # Left flank : GCAAACAGATTATACCTATGCTTGTATTTGCCTTCACCATGAGGTCAGCTGGTCCTTTTGCAGCATTCATCTTTGGTTTGACATGGAAAAATGTTACAAAGCATGCTGGTATACTGTCTATAATTCTTGGAAGTATTGCTGGATTCTGGTGGCAATATCTCAATGAACCTTTTGGAATTATGGCTGTTATTGTGGGATCAGTTGTAAGTGTTATTACTTTTATTATTGTTTTTGAAATAGAAAAGGCCTTAGGCCATCCTTTAATACCATTGCATATTTCACAGAAATAGATATAGTTGAATTTTAATAATATAGATAAATAATTTTTCCAACCTCAATTACTTTTAAATATGCTATAAGACATTGATATAAGTATATTTGTAATCTTTCTTAATTCTAAAGTGAGATAATACAAAATGGTTGGAAAAATTTTATTAGATGGCTTTATTTTCAATGGTTTGGGAGTTATAATGAATTTAGAGAATGGCTCTTTTACTGTG # Right flank : TAACTCTGTAATTGCACTCCGTGCATTGCTATTGGCATTGAAACTAGACAAAAATCAATTGAATAAATATAGTCGTATATTTTTTTGAATTGTTTACATAAAATTTATATTTGTACGAAGTAAAGTATTTCAGATATCTTTTCATTTCAAAACACATTCCACCTGATACCTTTATATATCCTATAGATTGAAGTTCATGATCATCAATTATTTTTCGTAGTCTTTATATATATTTTTTTATATTAAAAGTACAAGAAATCTATTTTTCGGGAAATAATTGAAACTTTTAATCGAATATTGAAAAAGATAGTAAAATTTGAGTATTTCTACCTCAAATCCATTATGCTATAAAAGCTTTTGGCTTCTCCAACTCTCCATGAGGAATAAAGAAAAAATTTATATATATGTATATATAATATTATTTCAATAAGAATGGAGAGCTGAGCTGTTATGAAAAAATCAAAATTGATTAACAGTATTACCCTATTAACTATTATCAT # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:76.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: NA [0,0 Confidence: NA] # Array family : NA // Array 1 241001-238407 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADPBD010000001.1 Clostridium tyrobutyricum strain 1001283B150210_160208_G3 NODE_1_length_275945_cov_58.4269, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ====================================== ================== 241000 30 100.0 36 .............................. AATTTATCTTTGGCTTTATCTATGAAATTAAAAATA 240934 30 100.0 36 .............................. TTATTATGCTTAATCCTCTGAGCATATCTGTATTTC 240868 30 100.0 35 .............................. TATATAGATGCTTTAGATAAAAAGATTTTTTACAT 240803 30 100.0 37 .............................. TGAGTTCCAGCATGGTCATTAACTACCGATTGTTTTA 240736 30 100.0 34 .............................. TTAATTACTTTTAAAATAGAATATCCATTCCCAG 240672 30 100.0 36 .............................. CAGATAAAAGATGATCCCGATGGCTCCAAGAGAAAA 240606 30 100.0 37 .............................. GGATAAGTCATATTATCTACATTTATTTTTTCTTGCA 240539 30 100.0 36 .............................. TGTTTGAAACTGTAAAATACTAAAACTGGTTTTCCA 240473 30 100.0 36 .............................. TCACCGACACCTTTTAAAGCCTTTTGACTTCTCTCA 240407 30 96.7 34 ......................G....... ACAGCTACATCTTGTTTACAGTATTTTTTAAAAA 240343 30 100.0 36 .............................. TCGGTTTACTGGATAACTTCATAGATTAAACAAATA 240277 30 100.0 37 .............................. GTGATAAATGTGCTTTAAGTATTATGAGCCGATTAAG 240210 30 100.0 36 .............................. AATGTAGTAGATACATCAGATGCAACAGCTCTAGCA 240144 30 100.0 37 .............................. CAGTTTCCATAGTATGTAGACATAAAATCTTCGTACG 240077 30 100.0 36 .............................. GGATAACTAACCCCGTCTGAACACTTTGGACAACTA 240011 30 100.0 36 .............................. GGGTAAGTTAATGGCAAGCCCTTCAAATGCAAAGAC 239945 30 100.0 38 .............................. ATTCTATTGGTAATCAAGAATTATTGCCTAATGATAGT 239877 30 100.0 36 .............................. GAAAATATGAAAAACGCATTAAACATGAATTCTATT 239811 30 100.0 35 .............................. AATTAAATGCAGCAATGATGAAAACAGCATCTTCG 239746 30 100.0 36 .............................. ATATAATTAACAATGATAACGAGAAAGAGTATTCGA 239680 30 100.0 36 .............................. TAGGTGGCTTTTAAAGTATTTATTGCGTCTAAAATA 239614 30 100.0 35 .............................. GATATAGATGTTGAAATGTCAACAGATTATAAATT 239549 30 100.0 36 .............................. ATGGGATGTCTTTTATTTTTTGGGTAAGCGATGAAG 239483 30 100.0 35 .............................. CTCAAAAGGTTAATAAGAAACAATACAATAGCTAT 239418 30 100.0 36 .............................. AATACTCTCTTATAAGAGTTTCAGCACGTCTAGCAT 239352 30 100.0 36 .............................. ATATCACTAGAACTAGTAAAACAGATAGAAAGGGTA 239286 30 100.0 36 .............................. CCACCAGTGAAGTCCACAAACTCCCAACCTCTTTCA 239220 30 100.0 36 .............................. GACTTGTATTTACTCACACAATCACTTCTTTCAGCT 239154 30 100.0 35 .............................. CTGGCAGCACAGTAAATACAATCTGCGTCACTTAG 239089 30 100.0 35 .............................. TAATTTTATCCTTCTCTTGGATTTCTTTTTGGCAG 239024 30 96.7 36 ......T....................... GTTGCCATGGATGCTCCACAAGGGCCTAAGTACCCA 238958 30 100.0 36 .............................. GAATTGAATGAAATAGAAGGGCAGGAATATCAAGGA 238892 30 100.0 37 .............................. ACGTATACCATATCTTTTATGGCAAAAGGGGCTTTTA 238825 30 100.0 34 .............................. AAGGTACTTCTTAATTGAGGTACCTTTTTAATAT 238761 30 100.0 36 .............................. TAATTTTATCCTTCTTTTAGATTTCTTTCTTGAAGG 238695 30 96.7 34 .................T............ ATATCTGGCTTTTTATCTGGAAGCAATGCACCTT 238631 30 100.0 35 .............................. AAGTTTAATGTCAAAAGATATATTCAAAGCTTTAG 238566 30 100.0 34 .............................. TTGGCGGTAATTGTGTGCGAGGCTATTTTATCTG 238502 30 100.0 36 .............................. TTTATTCTTGCAAGACCTGGAGAAGCACTTTCTGTA 238436 30 96.7 0 .................T............ | ========== ====== ====== ====== ============================== ====================================== ================== 40 30 99.7 36 GTTGAACCTTAACATGAGATGTATTTAAAT # Left flank : ATTTAGTTTGAAAAATATGATATAGTATGGAGGATTTTAATGGGAAAAAATTTTAATTTTAATTATGCTTTTGTATTTTATGATGTAAATGAAAAAAGAGTAAATAAGATATTTAAAATATGTAAAAAGTATTTCCACCATCATCAAAATTCTGTTTTTAGAGGATCTATAACTCCATCTAAATTAATAAAATTAAAAAGTGAATTAAATAAGATCGTAGCAGATAAGGATTTTGTCACAATCATAAAACTTATAAATGATAGTTGCTTTGAAGAGGAAACTTTAGGTATAAATGATAAAAATACTGAAAACTTGATACTTTGAATTTTCCAACCTGTTTTCTATTTAGAATCACTTCAATTTATTTAGAATCAATGGGTTACGTTATTTCTTATAAAATATATGCATAATAAAAATTGGTTGGAAAAAATTCAGCGAAAACCTTTATTTATATGCTTTCAAAGCTTATAATGAAATTAAAGAATGGCTATTTTACACAG # Right flank : CCCATAGAAGCTCTATACTTGCCCATATATTAACTGTTGGACCTTAAAATTTTTGAAAATATTAAAATCAAACATTTTAATTAAAGAGACAATTATTATAAATAAATTGGTATAGAATTATATTGAATAAATCTATACCAATTTTTAATTTGATATCAAGCCTTTGTTAAAATATCTGTTAAACCCAATTTTTCTATTCTCTTTTTTATCTCATTTTTATCTGTAGTATATAGTCCCTTTTCTTTCATTCTGTTAAAATACTCTGCACCTGCAAAAGTGTATCTGTTTTTTCTACCCTCTGCAGTTTTAATTTTATAATTGGCATAGCTTATTATATCTCCAATGGCAGTTTCAGTTGGAAGTACCAGCTCAGGTCTGCCGAGAGCATATCTTACTGCATTATGCCCTGCAAGAGAACCTGTACATATGGCTTCTGTATGACCTACGAATAAACCGCTTTTTTCTCCACCACAGAATAGGTTATCTACTCCTCGTACATG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGAACCTTAACATGAGATGTATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:73.33%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [3-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [68.3-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //