Array 1 3393-2479 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJNU010000026.1 Microcoleus sp. FACHB-SPT15 contig26, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 3392 37 100.0 36 ..................................... CTCAAACTAAGTACGGCACTAAAGAGTTGGTCTATG 3319 37 100.0 42 ..................................... TTGAGAGAAGGCAGCCGCAGTAATGCCTGAATCACTTAAAGA 3240 37 100.0 38 ..................................... CTGAATCATGGAATCGTACCAACTGCCGAGAGTCTTTC 3165 37 100.0 34 ..................................... CTTGAAGTCCAGCAATTACGCGAGGTTAGAGATT 3094 37 100.0 40 ..................................... CTCACTTAATCCCCCGCTGAGGTATGGCAAAGCATCCCAG 3017 37 100.0 35 ..................................... TTTACATCAATGGCGGCAGTTATTTACAAGTCTAA 2945 37 100.0 36 ..................................... CCTCCACAGTAAGGCGAGTTTGGATAGCGATCGCAA 2872 37 100.0 35 ..................................... AGAACCCGCCAGTGCTACAGGTAGCCTGATGGCTC 2800 37 100.0 35 ..................................... TTTATGCGATTGATATGACGGCTGGATTACTATTT 2728 37 100.0 33 ..................................... TCGCAAAGAGTGCAATGCGATCGCAGACCCCAG 2658 37 100.0 34 ..................................... CGAGTTTTGCGTATGCGATCGCGTATGAAGTCAG 2587 37 100.0 35 ..................................... AAAGTGAATCAACTCAGGCACATGGGGAGGAAATT 2515 37 86.5 0 ...........................AC.CA....A | ========== ====== ====== ====== ===================================== ========================================== ================== 13 37 99.0 36 CTCTCAATTACCTTGAATCCCTATCAGGGATTGAAAC # Left flank : CAAGGTGGATGCTGTTGACAAAGAAACTGTAGATGCTATTGCAACTCAACTAAGCCAGCTAACTCAGGTGCCAGTGTTTCAGATTTCAGCGGCTACTCGCCTTGGATTAGACCCACTCTTACAAAAAATCTGGCAATCTCTCGACCAGCTAGCCTCTATTGAAGTGCCGACTCTAACTGGACTTTGACATTCTCTAGATTGGGATAGGGTGTGAGGAAAAGCAATTTTCCTGATTTGTTTGGACAATTGCTCGTAGGTGTTTATCTTGCTGAATGCGCGAAGGGGTAGGTGTTTTTGAGAACTTACTCTAAGAATCGACTGGATTCTTGATGAGACAACGGTTTGAAGCTATCACCCGCATAGAGGGATTCGCGCACCATAGCAGGTAAGGGTTTCAGCAATTTTCATTCTTGACAAGAAGCAAGTTTTTGGAGATGATTGGAACATTCGCGCAAACGAACCTTGAATACTTCATACAGTCAGCCTTTCAGGTTGCCGCT # Right flank : TAGGGGTTAGGAAGCTTCTCTTACTGCGAAGTACTAGCATCCAACCCCGGCTGATTCAATTCAGTTAATTTTTGATACCCCCAAGGGAATTCGAATCCCTGTCGCCTCCGTGAAAGGGAGGTGTCCTAGGCCTCTAGACGATGGGGGCTTGTTTTCACACCTTTATAAGATTAGTAGGTATTTCAGTATCTGTCAACTACCTGCTGAACTCAACTTAGCACCCGCACTTTCCACAACTCACTTAATCCCCTTACGCCATTGGGCTAACCGTTGTTGAGCCTCGGCATCTAAGGAATTGAATAAAAAACGACCCTGAGACTGTTTCTGGGGTCGCTGTCGGCGACGAGTTCGACGCGCCGTAAATTCAACATCACTTGCCAACTGCTGAGACGACATCCATTCTGCCCCGTACCCTACCACCGTAAGTTGCTGCGCTCGATCTGAAGTCGCAACGATTAATCGCTGGGTTAGCCGACTAATATTGAATCGGAAGGAAGCAC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:0, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTCTCAATTACCTTGAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.20,-7.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [51.7-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 1 165127-165875 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJNU010000029.1 Microcoleus sp. FACHB-SPT15 contig29, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 165127 37 100.0 35 ..................................... CTCACCCTTGGGAGGATACCGCAAGCATCGAGAAT 165199 37 100.0 35 ..................................... TTTGAGGGGGTAAATATCCGCTATTATCAGCTAAA 165271 37 100.0 35 ..................................... GTAATTTGCTTACGGGATATTCCCGCTTCCATTAA 165343 37 100.0 34 ..................................... CATCTTCATTACCTCACTGCACAGTAGAAAGCAC 165414 37 100.0 33 ..................................... AAACAGCCGGGACTGCTTTTCTGCCACCATTAG 165484 37 100.0 34 ..................................... GTATTTTTAACAAGTTCATTGGCTTCCTCTGTAA 165555 37 100.0 32 ..................................... TTCCCCAATGAGTTCGCCGCGAGGGCATACTG 165624 37 100.0 37 ..................................... AAAACTTCTGGGGAAGAAGTAGGTGTATCAAATAAAA 165698 37 100.0 34 ..................................... TTGGTCTTAGCCATCAGCTAACCTCCGGTAATTT 165769 37 100.0 33 ..................................... TAGACAGGTTAAAAGTTTTAGCACAACGAACAC 165839 37 97.3 0 ....................................G | ========== ====== ====== ====== ===================================== ===================================== ================== 11 37 99.8 34 GTTCCAACGAACATGAATCCCTATCAGGGATTGAAAC # Left flank : ATTCACTCGCTGCTCAAGTCTTATGGTCAGTGGATGCAGTTTAGTGTGTTTGAATGCGACTTGACTGAGACTCAGTATGCCAAGTTACGAGTACGGCTGAGTAAGTTGATCAAACCTGATCAAGATAGCATCCGCTTTTACTTTCTCTGTTGCGGTTGTCAGAGAAAGGTTGAAAGAATTGGTGGTGAGCCACCTCGTGATGACACGATTTTCTTTGCTGATGGTGGGGGGTAGCGATGTAGGTTCGTTGAGCGCGGAGGGGTAGGTGTTTAGATGGAGCGTAAGCAAAAAATGGCTGAACTTCCTTGTCGAAAAGGGTTTAAATGCGATCGCTCCTCTAACACCATCCGCGCAACTTGTTTTTTGCTTTAATAGCAAGGGTTCCAGTTTATAGTCGCTCAGAATTTACTGGCTAGTGATGGCTTTCAGTGTTAGGATAATTGCAATTCGCGCAACTGCACCTCGAAAACTAAATATTGTAAGCTTTTCCGGTGCCTGCT # Right flank : GTGATAAGCTAACAAATGCATTTAAAAACTATCTAGGGTAAAGATTTAGATGACTGGCTCAACCCAGGTTCCGTATCTATTACGGGCAGCCCGTGGCGAAGTATTAGACCGTCCGCCCGTATGGATGATGCGGCAAGCAGGGCGTTATATGAAAGCTTATCGGGACTTACGGGATAAATATCCTTCATTTCGCGATCGCTCTGAACGACCAGATGTTGCAATTGAAATCTCGCTGCAACCTTGGAAAGCATTTCAGCCAGATGGGGTGATTTTGTTTTCCGATATTGTGACACCGCTACCCGCCTTAGGCATTGAGATGGATATTGCGGAAGGCAAAGGACCAATTATTGAGTCACCTATCCGCACCCAAGAACAAGTTGATCAACTGCACCCCTTAGAACCCCAAGAATCTCTTCCCTTTATCCAGGAAATCCTCAAGGCATTGCGGCAGGAAGTTGGCAACCAATCAACCGTACTAGGCTTTGTCGGTGCGCCTTGGA # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:0, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCCAACGAACATGAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.76%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-7.40,-7.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.27 Confidence: HIGH] # Array family : NA // Array 1 49534-48488 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJNU010000044.1 Microcoleus sp. FACHB-SPT15 contig44, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 49533 37 100.0 35 ..................................... CAACCAAGCGGTGAATCATACCCAATGCTGGTATC 49461 37 100.0 37 ..................................... TGCCTTATTTTTGCACTTATGCTCAATTCCTATCTAC 49387 37 100.0 35 ..................................... TGGGGAGATGAATTTGTTAGGAGCAATGGAGGGAC 49315 37 100.0 36 ..................................... ATGGTCTTACCCCAAAGTAAGTGCCCCACCCCTGGA 49242 37 100.0 35 ..................................... GGCATAGACTGTCCTTCCTCCCAATATTCTTTAGA 49170 37 100.0 37 ..................................... TACCAGCTTGACTGAGGGCATAGACACCACCACCAGT 49096 37 100.0 34 ..................................... AAGTTACTACGGACAACCAGAAGGTGGTTCAGCG 49025 37 100.0 34 ..................................... GAGCAAGCTTAGGGAAAAAGCGATCGCTTATCCT 48954 37 100.0 34 ..................................... CTGCTAGCTGTGCAGTCTCACGGGCGAATGCCAG 48883 37 100.0 37 ..................................... ATTCCAATGGGTGAGTGTGCCGACATAGACCATGAGC 48809 37 100.0 36 ..................................... AGCTAACAGAAGACAATATATTGGCTCGGACTCTTG 48736 37 100.0 34 ..................................... AGAGGCGAATTGCTCAAAGGATAAAGGCAGCTTA 48665 37 100.0 35 ..................................... CGCGGATACACTGACACCCATGACCCGAAGTTCTT 48593 37 100.0 33 ..................................... ATGGCGCTATTCATGCCTCGGATTGAGGAAAGC 48523 35 81.1 0 ......................T..CCC.-..-...T | G [48500] ========== ====== ====== ====== ===================================== ===================================== ================== 15 37 98.7 35 ATTGCAATCACTACTAATCCCTATCAGGGATTGAAAC # Left flank : ATCCATATAGGTTTCGACATCGAGGCAGTACAAGACAGCGTTTTTGTACCAGAGGTCTAGCATTGAGAATACCTATGATTAAGTTGTATTTGAAGAGACAGAGTTATCCGGCTTCGGATGCGATCGCAGACGTTAGTCTATGGAAGAGAGTCTTTGGGAAATATACTCTCCTGTTACTAGTGCTATGTCTTCTTTCGTGAGGGAGAGAAAATCTGCTAATTTAAGGTACTTCAGCAATAATCCAATCACAGAGAAGTCGGTCAACAGCCAAGTGCGCGAAGGTATAGGTGTTTTTTGCAAGGTTGGCAAAATAATGGCTACGTTCTCCATTACACAAGGGGGTTGATGCGATCACGCTCAAGGAAGGATTCGCGCACTATACAGGATAAGGGTTTGAGCAATTTTGGCTCTTGACAGATCGGTGATTTTTTGAAATGATTAGAGCATTCGCGCAACCGCACCTCGAAAATCAAATAGAGCAAGCGTTTCAAAGCCGCGCT # Right flank : TCCGATCCCCCAGCACCCTTAAAAAGAGGGGAGAATGAGCGTCAAAGTCCCCCTTTTTAAGGGGGATTTAGGGGGATCTGCACTACATAAACGAAGCTAACAAAGTTTGAACCGAATTCCCCTATGCACTCAGGACTGGTGGCTGTGTCCGCAAAACCTCTTTAGGCAACTCTGCAAGTTGAGCTTCAATCTGATCACGCACAATCTGACGATACGCCAAAAAGTGTTCGTTGTGAGCGCAAACAGTAAGGTAATGCTCCCAGACACCAGGGTTATTCTTGATGACGCTAAACAGGTGATGCCAAAACTTCCAGCGAGTCTTACGCTGGACTCCCTGACGCCAGCAGACAATTAGCAGTGCCTTGAGGTCTACCAAACTTGGCAGTTGCCCTGGGGGTTTGCATTTTGGTGCCCCTAGAATCAAGAAATGGCGATAGGCACGATCTAAAAAGCGCTCAGGATCATACAATTCACAAAACGCCTCAACATATTCCCTGGCG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:0, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATCACTACTAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-48.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 390701-391027 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJNU010000053.1 Microcoleus sp. FACHB-SPT15 contig53, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 390701 37 100.0 37 ..................................... CTGAAGTGCGATCGCCTAGCTTCTGAATGTAGTCAAG 390775 37 100.0 35 ..................................... TCGATCTCAGCAGATCTGTTTGCGAAGTTTTGTAA 390847 37 100.0 35 ..................................... AGTTGAGCGTCTAGTCCCTGAGCTGCAAGCGGCTG 390919 37 94.6 35 T...........A........................ AGGATGTGTTGCTAGAGCGGTCTGGGTGGTATTTC 390991 37 94.6 0 T...........A........................ | ========== ====== ====== ====== ===================================== ===================================== ================== 5 37 97.8 36 GTTTCAATCCCTGAAAGGGATTAGAGGTAATTGAAAG # Left flank : GTCAAATGTACCTGCTTGTCCTTCTGCCAGTAGCGATTTCAAGGTTTCTTGTGCTGGGGCGATATGGAGGTCAATTTTGCCAGCTACTCCTGCTTGTTGCCAATAGCGACGTGCAATGTTTGTATATTCCTCACTCACATCACAGGCAACTACCTTGCCTTCTGGTGGCAGCGCTAAGGCTACAACTAGGGAACTATAGCCTGTAAACACCCCAACTTCTAAGGTTTTCTTTGCTCCTATCAACTGCACTAGCAATGCCATAAACTGTCCCTGATCTGGGGCAATCTGCATTTGAGCCATTGGATGCTGCGCTGTTTCCTGCCTTAGCTGGGTCAAAATTTCCGGTTCTCTGAGAGAAACTGACTGCAAGTAGTTGTAAAGCTGAGTGTCGAGTCCTAGTGTTTGATTAGACATTATGGGTTTCGAGTTAGAGTCAGAGGTGCAAGAGTTAGGCTATCAGCTTTGAGGAGTCAGCAGTCAGGTTTTAGGGCAAAAGTTGC # Right flank : GAGAGCGGGAGCCTGAAAAGCTTGCTGTATTCGGTTTTCAAGGTGCTTTTTCGCGAATGATCTAATCATCTCCAAAAATCTCTATTCTGTCAAGAGTCAAAAACGTTGAAAGCCTTTTCCTGTATGGTGCGCGGATGTCCCAATTGTCTCAAAAGCTTCAAATCCTTATGGAATCAGCCATCCAGCCTAACTTTTAGCACCGTCATTTCAAACACCTACCCATCCGCGCCATTCATGATTCTCAATCGCTTGAGATGCTAGGGCTTACGCATCGTCTTCGGCTTTCTCAATCCCAATAATTTCTTGGTTTGCTAAGTCTTTCCAAGTGTGAAATGTAAAGCGGCGTTTGCCTCCCTCCAAATCCCATACCCTCTGCAATGTAGCGTTTGGGTAGGTGCCATTGTCTAGTTGAGCCAATAGTGGTGGCCAAACGTTTTTGATGCGGCTTGTCTCACCAACGTAAAGCTTTAGATGACCAATGTGCGCGATCGCATAGATCC # Questionable array : NO Score: 8.95 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAATCCCTGAAAGGGATTAGAGGTAATTGAAAG # Alternate repeat : TTTTCAATCCCTAAAAGGGATTAGAGGTAATTGAAAG # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:62.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [53.3-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA // Array 1 357059-357532 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJNU010000062.1 Microcoleus sp. FACHB-SPT15 contig62, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 357059 37 100.0 35 ..................................... ATTATAATCCTAGTGAAGGGATTAGTAAAGAAAAG 357131 37 100.0 37 ..................................... TTCATATGCATGATACTCATGGAACATGGTCAATAAA 357205 37 100.0 36 ..................................... AATATACAACTAGTAAATACTATCGATAACGGATAT 357278 37 100.0 35 ..................................... ATGAATATCATATGGTTATGGATTTTGGTTTTAAA 357350 37 100.0 37 ..................................... TTATTTTTATACTTACGATGGCAATTCTTTTACCAAG 357424 37 94.6 35 ..............GA..................... AGAAGTTAATTGTTATACTTTCCTCTCCGATGGGA 357496 37 94.6 0 ..............G............G......... | ========== ====== ====== ====== ===================================== ===================================== ================== 7 37 98.5 36 GTTTCATCAACCTTTCCGCTCTTGGGTAGGTTGAAAG # Left flank : TGTTCAATAGCGCGTCTCGTTCCCCGTGAACAGATGATAAGTGTAAGGGCAGTTTAATTGCTTTCCGCCCTGTGTAGTTGTCCGCGTCTCTCTAATTCTTTTGAGAGACAGGTCGTTAACGGAGCTTGCTTCGTAAATGACCTTCCTTCTGCGGAACTTCTCCGTAGATAGGGTGCAGGGTCGTGCCTAGCATCAAGGAGCTATGTTTTTATAACTAGTGGTAAGTGCCTCTGGTTATAAGGATACAGGAGTACGTGTCGTGGCAGCTACCGAATCGCCTCCGAGCAAGGAGGAGTCCTCCCAATCTATTTTTTGACGGGTCGAAGTGGGGTCAAAATCCTGGGAGTCCCGTCAAAAGCTCAAAACTCCTGTCTAGTCTTGGTTTGAGACTTTTACAAAGTCAGCATTCTCCTCGGAGAAAAAGCTGGAATGAGGAATTTAACATCAGCCGTCAAAAATTCATTTGTCAGCTTATGTAGATAAGGGTTTCAGCGGACGCG # Right flank : GACTGGGACAATGATGAACTGCAAGTGTGTGCCCAAGCGGTTGGCAAAAAAACAGGAAAACCAATTATATTGAGCGGTTCAACAACACTCTACGGCAGCGAGTAGGACGCTTGGTTCGTCAAACCTTGTCCTTCTCTAAAAAATTGAGCAATCACATCGCTGCGATTCGGTACTTTGTACATCATTACAATGTCTTTGTTCGCTCTTGACCATTACTATTCACCGCCACCCAACACCATTTTGTCTGGACACTAATTCTTTAAAACTGCTTTAGTAGCAGGCAAAGAACCTCATTAAGCCTGAAAAGCCCATTCTTTCATTCCTTATGGACACTAATTCTTTAAAACTGACCATTAATTCTTTAATGGACACCATAAGCCCTACAGACCTCCTGTAACAATTCCAGTCGGAGAGGGAACTATAACAATTAACTTCTCACCCGCGAGAAGAAAGCAAGACATTGGGACGACTAGTAATGGAATGATTGCCTTCTACATACA # Questionable array : NO Score: 3.19 # Score Detail : 1:0, 2:0, 3:0, 4:0.93, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCATCAACCTTTCCGCTCTTGGGTAGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.05%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.90,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [56.7-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.78,0 Confidence: HIGH] # Array family : NA // Array 1 120744-120491 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJNU010000065.1 Microcoleus sp. FACHB-SPT15 contig65, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ====================================== =================================== ================== 120743 38 100.0 35 ...................................... TATTTTGAGAAGGCATTAAATAATATCCAAATTAC 120670 38 100.0 34 ...................................... AGGTGGACGTTAATGAGCGACCAACGCGAACCGA 120598 38 100.0 32 ...................................... GCTAAAGGCTGAGCCAATCTGTCCATCATTGC 120528 38 97.4 0 ................................A..... | ========== ====== ====== ====== ====================================== =================================== ================== 4 38 99.3 34 CTTTCAATTAACATGAATCCCTATCAGGGATTGAAACG # Left flank : ACCTTGCCACAAGTCGCTTGGTGTTTTAAGCTGACAGCGTAGCAATTGTCGCTGACAGTATTCACACACTTCGATGTCTGCGGGGCGATCGCATAGGGGACAATTGGACTTCAGAAAAAGAGCCAGTAGACCATTTTTGAGTTTCTGAATTCCAGTTGCCATAATTCTTTGGTTGGAGGTTAGCCAACTTTAATTTAACGGATGGCAAGGGATGAGCGATCGCAATTTTTGCTGGCGACTTCACAGTTGGGTGCGCGAGTGCGTAGGTGTTTTCAGCGAGTACGGCAATTTAGAACAGTATTCCTGATTAGACAAGGGTTTGAAATCTCTCGCCTCATTTTTAGATTCACGCAACTCCCAAAAGTACTGGGATGGCTAGCTTTGCGACGAGTTAGACACTCTGGGTCTTGCCTGATCTATCAGCTTGAATGCTATAATCCAATTGAACCGCGCAAAAGAACCTTGAAAACTTCATACTGTAAGCCTTTCAGGCACTCGCT # Right flank : GTAAAGATACAAATAACCAATAACAAACAACCAAAAACTAATCAGATTCATTGGGTAAACTATCAATTTTTTCCTTATCGCGCTGCTGCTGTCTGACTTGCATTCGGTATTTCCAGTCTCGAATTGCGATCGCAGCTTTGGCAGCAGGAGAGTGAGGATTATCACCAGTGCTGTCATTCTTACTTGCTGCAACAGTGTAGTCTGGTTGGTGGCGCATGACTAGACACTTGGATAAACTATCATGCGGTGATTCTTGATCGAGCGCTCGTAGAATCGCTTTAACTGATTTATAGCGTTCTTGTAGAGAAATCTTGAGCATTTTGCCGAGAATCTTGGCAAAGGAGTCACTGATTTGCACGGAATCTTGCCACAGAAGTTCACCCGTTTGGCGATGAGTATCAAAATCTAGGGGAGCTTTCCCAGTTAATAAATATAGACAAGTAATGCCTAGAGCATAAATATCACTACCAAATACAGGTCGTAGAGAAAATTGTTCCGGT # Questionable array : NO Score: 5.82 # Score Detail : 1:0, 2:0, 3:3, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTTCAATTAACATGAATCCCTATCAGGGATTGAAACG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:63.16%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.30,-7.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 89899-89574 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJNU010000070.1 Microcoleus sp. FACHB-SPT15 contig70, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================= ================== 89898 30 96.7 45 ...C.......................... ACACCCAGATAATTACTGCACTCAGAGTGCTGGCAATCTTTCAAC 89823 30 100.0 44 .............................. CTGGTGGCTCCGTGACCATTTAAAGTTGGGCAGAGTCTTTCAAC 89749 30 100.0 42 .............................. TCCTTGCTTCATCAGGGGTGTATTCAGCTCGACTCTTTCAAC 89677 30 100.0 44 .............................. TCTACCACTAGGGGCAACAGGAGAGCAAAACGGCCCCTTTCAAC 89603 30 96.7 0 .............................C | ========== ====== ====== ====== ============================== ============================================= ================== 5 30 98.7 44 CCAACCCAATGCGGGAGGGCTGATGAAACT # Left flank : GAGGAACTTGACACACAAGAGCAAAAAGCAAGTTATACTAGCTAGGTATGCAAACGGGATGTAGCGCAGCTTGGTAGCGCGCCTGCTTTGGGAGCAGGATGTCGCAGGTTCAAATCCTGTCATCCCGATTTAAATTGTCGAATAACAAATTATTTGTCGCTGGTAACACATTACTGTCGCTATTCACACTTTAGTGTCGTTACTAACAAATTATTGTCGTGCAATTCGTTCCAATGGCTGATAACAAATTAATGTCGTCCAGATGACTCCAGACCAGTAGAACGATACGACTTCAGCTAAAGTATGACCTCATCATGACTCCCACGACGACAATGATGAGCTTATTCATGCTTGCCTAATCTTTGCCTTCCAAAGCAGGCGCGCCTTTCAACCCTCCCTAAAAATATTGTCAATTCTCGAAATTTTAAATCGTTTGGTTACGTTAAGCAACGTTAACCTACCTTACATATCCGCAGGCACAAGCTCTTCTGGACTTTCAA # Right flank : GCGCCCGCTGAAACCCTTGTCTACACAAGCTGACAAACACATTTTTGTCGGCTGGTTTTAAATTGCTCATTTCAGCTCTTTCCCCTAGGGAAAGTTGACTGAGGTGAAAGTCTAAAACAAAGACTAGACAAGAGTTTTGAACTTTTGACGGCATCCCAGGGATTTTAACCCCGCTTCGACCCGTCAAAAAAAGATTTAGGGAGGGCTCCCCCGAAGGGGACGATTTTGTAGCCACCACTGCGGTAATCCGCACCCTTGTTGACAAGAGCTAAGGCTTTGGGAAAATTTACCTTCTCCCTCGGCTTGACCACATTTTGCTGGGAGCGCACCTTTCCCGCATACTAGATACGACAGTATTCAGACACGGGAATTTCCCAACCTATGAAGAAGGTATTCATAGGGGCAGCATCATGGGCGGGCAGCTACTAGGGCTCAGAAAGTAGGACTGCCAAACGAGCAGTCAAACAAACCCAATTAACTTGTACAGAGGCAATAAGCAT # Questionable array : NO Score: 3.00 # Score Detail : 1:0, 2:0, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CCAACCCAATGCGGGAGGGCTGATGAAACT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.60,-1.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [1-1] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-55.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.74 Confidence: HIGH] # Array family : NA // Array 2 164819-164565 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACJNU010000070.1 Microcoleus sp. FACHB-SPT15 contig70, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ===================================== ================== 164818 37 100.0 34 ..................................... TAGGCAATGTACATAGCAGTTGTTGTTTTACCAT 164747 37 100.0 37 ..................................... AAGGAAGCTCTGGAATGCTCGAAATTTCCTCAGCGCT 164673 37 100.0 35 ..................................... TTAGTAGCTCTTGAATCTCCCATCCGTAGATCTCA 164601 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ===================================== ================== 4 37 100.0 36 TCTTCAATTCCTGAAAGGGATTACATAGCGCTGAAAG # Left flank : AGTTCCTTTATCCGGTAAGCGCGATTCAAGCGGCTGCCTTCAATCTAGAGTCGGAATCACGGACGAATATTGCCTTGGCGATAGAAATTCTGGATAATACGATAGATATTCCACAGAAACGAGCGTTTTTGGCAATTCTAGACCGCCGTTCTACGACTGAGAAGCTTGCTTCCTTGGAAGAGTTGGTGCCTTATCAACCGATGAGTCCAAGCGATCGCTTACGGCGGTTGATTGATCTACGGCATTTTGTGGCAGACTGGCCGTTAGCTTGTTGTTTTCACTTAGCGAAGGCTGCTCACTGGAGTCTAACTCCAGAAGGAACGCTAGTATGTCTACGTCATCCTATAGGTTTTGTTCGGGAAGCTGTTTTGACGTATCTAAAAGCGGCTTCTCCTCGTGCTTGTATGGAGTTGTTACCAGCATTGAAAGCGGATTCAGATCGTTTAGTTGCTGCTCAAGTTCAGCAGATGATTGAAGAGTTAGGTCAAGTTAGCTAATCC # Right flank : AGCGGGAGGCTGAAAAGCTTGCTGTATGTAGTTTTCAAGGTGCAGTTGCGCGAATGACTTAATCATTTCAAAAAAATCACTATTTGTCAACAGGCAAAATCGCTCAAACCCTTGCTGTGACTAATGCGCGAATCGTTGATTAGCTGGAATGGCTTGTAATCCTTGATCTAATTAGCCCTACCGCTTCAAACGTAGCTTATTCATAAAAACACCTACCCATTCGCGCATTTGCCACTACACCTAAAAACGATAGCCAGAGAAATTTTTTCTGCTGTGTTCAGGAAAATTCCAAAGATAGGACATTGCACACTGAAAGTTTTGCAAGAACATCCGATCTTCTAAACTTAATTCAGCTTGTTTAAGACTTTTAAGACACTTGTAACGCACAATTGCTTGTTCCTGGAAGTGATATCTATCTAGATCAGGAAGATGTTCATCGTTAGCTTTTGGCATTTTAAGGTTGTCTCCTGGATTGGTGTTGTCAATTTGGGAGGAAGTCC # Questionable array : NO Score: 2.86 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TCTTCAATTCCTGAAAGGGATTACATAGCGCTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-4.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [51.7-58.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.37 Confidence: MEDIUM] # Array family : NA //