Array 1 231191-232659 **** Predicted by CRISPRDetect 2.4 *** >NZ_CAJCFU010000078.1 Arsenophonus endosymbiont of Apis mellifera isolate ArsBee_CH, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 231191 28 100.0 32 ............................ TTATCACCGAAAATAGAGAAAAGAGTTTTAAT 231251 28 100.0 32 ............................ ATGTTCTGCGCAGCATTTAAAAAAGCCATAAA 231311 28 100.0 32 ............................ ATCTTCATAACAACATTCAAAATCGCAAATGC 231371 28 100.0 32 ............................ TATAAATCAGAGTATGCAGAACAAGCGCGTAA 231431 28 100.0 32 ............................ AAGCCCAAGTCTTGTTTCATCATTGAGTAAAT 231491 28 100.0 32 ............................ TTCTGTAAATCACTACTGGTATCACGCAAAAA 231551 28 100.0 32 ............................ AACATATATTACTGATCACGCAGAAAAGCTAA 231611 28 100.0 32 ............................ TCTATCAACCATGTATACATCAGAATATAAAT 231671 28 100.0 32 ............................ TGTTTTGACACAATCTGATATTGAGCACATAA 231731 28 100.0 32 ............................ AACAAATCAAAATGCGGTCGTTTCTATTTCAC 231791 28 100.0 32 ............................ TTGTCTCTTTAATCGCAAGGGTAATTTTGAAA 231851 28 100.0 32 ............................ TTTTTGAGGCCAAGGAAGGCACGACGTAAAAT 231911 28 100.0 32 ............................ TAAAACCGCCTCGCATCACATGACGACGAGCA 231971 28 100.0 32 ............................ TATTGATTCTATTATATTATCGCCTAAAAAAG 232031 28 100.0 32 ............................ TATTTGCTGCCTCAATCGGCAACGATTTAATG 232091 28 100.0 32 ............................ AAATCCACAAATCCTAGATAAAATGCTAGTAG 232151 28 100.0 32 ............................ TTGAGAAATAAGGGAAATGTTAATACCAAACC 232211 28 100.0 32 ............................ ACGAGGGTATGTCTACTATAGCCCCTTCATAG 232271 28 100.0 32 ............................ ATTTTAAGAGATTTTATTATGAAAATGCGTTC 232331 28 100.0 32 ............................ TTACCTAAATGGAGAGAAAGCTAACTTTAAAC 232391 28 100.0 32 ............................ TGTATCCCCAGATCGAGAAGGAGTAGAAGCTC 232451 28 85.7 33 A.........A..C.............A CCATAGTCCCTTTCATGGATAATGCTTTTCTTG 232512 28 89.3 32 ..........A..C.............A ACTAATGCCAATAAAACCGATAAAAGACGTAC 232572 28 89.3 32 ..........A..C.............A ACTAATGCCAACAAAACCGATAAAAGACGTAC 232632 28 89.3 0 ..........A..C.............A | ========== ====== ====== ====== ============================ ================================= ================== 25 28 98.1 32 GTTCACTGCCGCATAGGCAGCTTAGAAG # Left flank : AATCTAGCTAAATGGTTAGCTCGTTTAATGGATTATGTGCATATCACAACCATACGTAATGTTCCTGAACATAAAGTAACTGGCTATGCTATTTATAACCGCAAACAAGTTAAAACTAATGCAGAACGTTTAGCCCGACATCGTGCTAAACGTGGTGATATTGCTTTTGATGAAGCCTTAAAACGTTATCAAAATGTCGTGACAACAACGGACTTACCCTATATTAAATTAGAAAGCCTCAGCTTATCTAATCACAATAACAAACATCATTTTAAATTATTTATCACCAAAAACAACACAGAGTGTACTAACAACCAAATCTTTAGGACTTACGGATTAAGTTCAGTGTCAAGCGTACCTGAATTTTAACCCAATATTTTTTGCTTTTTAAAAAAATAAATCAAAATCAATAAGTTATAATAGCAAATAAAAACTTAGGTCAAACCGTTATTTTTGTTCTAACTTGCTGTTATAACTTTATTTTTTATTGTAGTATTGTT # Right flank : ATTCACGATTACCGTGATTTTTTCATCCAGCTCTTTTTCTTTCAGATCGATAACTGAGTAAGTTGGCAAATCACTATTTCTATTTTGACTAACATTAGTGGTTGGAATGATTGCGATCATTGCAAGGGATTGTTTGATATTGCCGGCAATCACAGCTTCAATCGTCGGTTTTAATGCTGGGTTTGTCTAACAATCTTACGTATGACAACAGTATCAGAGGCACTGCGTTCGAGAGTTAATTTAAATGGCACGCCACTTTCATAAGATTTAAGTTGTTGTCAGTCACCGGAAAGAACAATACGTCTGCCTTGTCCGGTAATATTATTTAATAGGATGGCGTAGATTTTGTTGCCGATCATTCAGCTTTTATTAATGATAAACAGGCTATTTATCGACTAAGATATAGATTTTCATCTTAAAAAATATATTTTGCATTTATTTTTTTGCCGTTTGGGTCGATAGAAATGTATAACCTGCTGTCCAGCGAACATCAGTATTAT # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGCATAGGCAGCTTAGAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGCATAGGCAGCTTAGAAG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //