Array 1 61308-60064 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_FXPF01000014.1 Klebsiella pneumoniae subsp. pneumoniae strain 3189STDY5864869, whole genome shotgun sequence		Array_Orientation: Reverse

  Position	Repeat	   %id	Spacer	Repeat_Sequence              	Spacer_Sequence                 	Insertion/Deletion
==========	======	======	======	=============================	================================	==================
     61307	    29	 100.0	    32	.............................	GGGGCCAGCTCCCGGACGAGAAATGTGACGCC	
     61246	    29	 100.0	    32	.............................	CGATTACGGAGTCGTTCACAAACCGACCACCG	
     61185	    29	  93.1	    32	............TG...............	TTGCGGACGTTCAGACGCTGCATGGCGTTCTC	
     61124	    29	  93.1	    32	............TG...............	TTATCAATGGGGAAAAATCTTCATTTGTAACT	
     61063	    29	 100.0	    32	.............................	AATCCTGGAGCTGGAAAGGGAGCTTGCCTCGC	
     61002	    29	 100.0	    32	.............................	GCACCCTGGGATGCCTTTTGCACAGTGTCAGG	
     60941	    29	 100.0	    32	.............................	GCACCCTCACGGATACCTTTTGCACAGTGTTA	
     60880	    29	 100.0	    32	.............................	CAAAAATGCCAGGCACTGACTAAACCGCCGTC	
     60819	    29	 100.0	    32	.............................	GAAAGTAGGGGCTACGCCGGAATTCCGAAGAG	
     60758	    29	  89.7	    32	A...........TG...............	TTACTTTTTGGCAGTTGGTAAAACACTTTTGC	
     60697	    29	  89.7	    32	............TGA..............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     60636	    29	  89.7	    32	............TGA..............	CACTACCAGATCCGAATGGACACCCGTAATGA	
     60575	    29	  96.6	    32	.............C...............	GAATGAGAGCAAAATAATGAAATTAACAGGAC	
     60514	    29	  93.1	    32	............TG...............	CTAATGAGCGGTATATTTTTTCTAATCTGAAA	
     60453	    29	  96.6	    31	.............T...............	TGACTTTTAAAAAAATCAGCTGAAACAGCCG 	
     60393	    28	  89.7	    32	.....-......TC...............	TGCGTGCAGTAAACGAAAATACATCGGTCAAT	
     60333	    28	  89.7	    32	.....-......TG...............	AATGGTGACAGGCAGTGCACCGGCCTAGAGGC	
     60273	    28	  89.7	    32	.....-......TC...............	TTCCGGACTCCTGTTTCCGGCAGTGGATTAAA	
     60213	    29	  93.1	    32	............TG...............	TAAAAGCGTTTTACATGCATTCAAAAAAGTTA	
     60152	    29	  93.1	    32	............TC...............	GGCATGAGCGAGAACCACTGCGAGAGTGTGGT	
     60091	    28	  82.8	     0	..........A............-.C.TT	|                               	
==========	======	======	======	=============================	================================	==================
        21	    29	  94.3	    32	GTATTCCCCCCGCATGCGGGGGTTATCGG	                                	       

# Left flank :   GATAAAGACACCAAAGCTGAGCTTCAAATCAAAGTACGGGAGCTCGATGAAAAAATTCAGGCCCGCAAAGATCAGAAGCAGGAATCTCGCGAGTCAATTCGCCGCCCGATTGACCCGTATGAAGCGTTTATCACCGGCGCAGAACTCAGCCATCGCATGAGTATTAAAAATGCGACTGATGAGGAAGCAGGGCTTTTCATTTCTGCATTAATCCGCTTTGCAGCCGAACCACGTTTTGGCGGTCATGCGAATCATAACTGCGGTCTGGTGGAGGCTCACTGGACAGTTACGACCTGGAAGCCGGGTGAACTGGTACCAGTTACACTTGGAGAAATCGTCATCACACCGAATGGTGTTGAGATTGCCGGGGACGAGTTGTTTGCTATGGTAAAGGCATTCAATGAAAATCAATCTTTTGATTTCACTGCCCGCTAATTCCAAAAGCTGGTGGATTTTAGTAGTGCTATTTAATATTTTATAATCAACCGGTTATTTTTAGA
# Right flank :  CACAAAGTCACAACAACAGTCAGCAAAAACCACGCGATGATCGTTATTGAGGATTTGAAGGTTTCCAGCATGTCAAAATCTGCAGCGGGTACGGTAGATGAGCCGGGGCGCAACGTTGCGGCAAAATCAGGTCTTAACCGGGCGATACTGGATCAGGGCTGGTACGAAATGCGCCGCCAGCTCGAATATAAGCAGCGCTGGCGTGGCGGGGAAGTGCTGGCAGTAAATCCGGCCTACACCAGCCTGAAATGCGCCTGCTGTGGTCATACCGCGAAGGAAAACCGTCAATCGCAGGCAGTATTTGTCTGCGTGGCGTGTGGTTACGAAGCGAATGCTGATGTAAACGGCGCGTGTAATATTTTAGCGGCAGGACATGCCGTACTTGCCTGCGGAGGGACGGTGCAGTCAGTCCGCCCGATGAAGCAGGAACCTGGCACTGAGCGATCAGTCGTCACCCACTAATAATGGGAATCCCCCTCCTGAATCTCGCAGCGTGAAGG

# Questionable array : NO	 Score: 5.45
# 	Score Detail : 1:0, 2:3, 3:0, 4:0.71, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.48,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTATTCCCCCCGCATGCGGGGGTTATCGG
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     F [7,3] Score: 0.37/0.37
# 	Reference repeat match prediction:         R [matched GTATTCCCCCCGTGTGCGGGGGTTATCGG with 94% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  F [-12.70,-12.10] Score: 0.37/0.37
# 	Array degeneracy analysis prediction:      R [30-0] Score: 0.41/0.41
# 	AT richness analysis in flanks prediction: R [58.3-73.3]%AT Score: 0.27/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         R [0.74,5.18   Confidence: HIGH] 

# Array family : I-E [Matched known repeat from this family],   
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