Array 1 860-362 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZC01000021.1 Streptococcus halichoeri strain P154 NODE_21_length_34471_cov_121.975250, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 859 36 100.0 30 .................................... AAGGTTATTATACTATCGAAAAACAGATGG 793 36 100.0 30 .................................... CTTCTGTACTAGGTATTAATAATCCTTGGG 727 36 100.0 30 .................................... AAGGTTATTATACTATCGAAAAACAGATGG 661 36 100.0 30 .................................... GCCGATAATTATCGGAAATTTTAGAGGTTG 595 36 100.0 30 .................................... CATTGTGGCTAAGAAACGAGGAATGCGAAG 529 36 100.0 30 .................................... TAATCAAGTCAGAGGAATGTTGCATACGAG 463 36 94.4 30 .T............C..................... GATTGGTACGAAAAGAATAAAGAAGGCCTT 397 36 80.6 0 .T............C..............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 96.9 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : AACTAGCAACAGACCAAACGTTAATCTCTCGAAAAGTCCGTTGAAGCATCCCAGTAAGCAGTAAAAACTGAGAATATAAGAGCATATAAATTGCTTTGGGGATCGATACAGTGTCTTAGACCATAGTTCAAAGCAAGTATTTGTCATCCCCCGAATAGACAGAAAAAAAAGAGTCACGCTATCCAATCGTTCATATTTCTCCTGATAAATCGATTGCTGCCATCAATCAAGCCAAGCATTTGGAATACAAAACACCAGCCAAATGCTAGCATAGCAGCTGAGGAATCAGAGATTAGAGGCTTAATAAAAATTTTTGAACCTAAACTGAAAAGGTACTGACGATTAATCAGCCGACAACCATGATAGTTAGCCTTCTTAACGCATTGATTTCGCAAGAATTTTGCCGTATAATAGTGCTATGAAAGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : GAAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAAAATGTACCTTTGTCAATGATGTGAGACCAAAACAGGGATTGAAAGAAACTGAATATGCTATTCTCTAGAAGGAGCTAGCTGCTTCTAGTTTTTTTCTTGTTTCGATGGGTGAGAGCCAGTCAAGGGTCTGCATGGGTAGTCGATTGGACTTGTAGAGGTAGCGCTCCATTTGCTTAATAAGATCGTCGTAGGAGTAGAATTGGAGATGTTGGTAGAATCGCATGTTGTCATTGCGATGACTCCTTTCGACTTTTCCATTATGTCTTGGCGTCCTAGGTCTGATACACTTATGTTCAATGCCGATCT # Questionable array : NO Score: 6.11 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:59.46%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [10-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 480-180 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZC01000005.1 Streptococcus halichoeri strain P154 NODE_5_length_142747_cov_126.755476, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 479 36 100.0 30 .................................... AAACTAGTAGTGCCAAAGTTTGTGGCGGAT 413 36 100.0 30 .................................... TTTGCTTCTTCAGCAAGCTCTATTGGCACT 347 36 100.0 30 .................................... AAACGACAACACACGATCTAATGAATTAGT 281 36 100.0 30 .................................... AAACAAAAGTGGAGCAAGAATTTAATAAAT 215 36 80.6 0 .T............C..............TTG..CG | ========== ====== ====== ====== ==================================== ============================== ================== 5 36 96.1 30 GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Left flank : CTAGCAGCAACTATAACAGAATTAATCGCCTTTGAATGTCTAGAGAACGAATTGGACTTGGAATATGATGAGATTACTATCTTGGAACTTATAAAGGCTTTAGGGGTTAAGGTGGAAACACAGAGTGATACTATTTTTGACAAGTGTTTGGAGATTTTACAAGTTTTCAAATACCTGTCTAAAAAGAAACTCTTAATTTTTGTGAATTGCGGCTCCTATCTTACCAAAGAAGAACTCTTGAAGCTGAGAGAGTATATTGAATTATCTCAGCAAACGGTCCTCTTATTAGAGCCAAGAAGTTTGTACGATATTCCGCAATATGTTCTAGATGAAGACTATTTTTTGATAGCAGAAAACATGCCATAGTCTAGCTTCTAAAAACCTTGATTTCATAAGGCTTTTGCCGTATAATAATGCTATGAAAGGGCGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : GAAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAATCATTCCCGTAGTTAGTTATTCCATAGCCATCATAGCTTTTCAAACCCTCAAAAAGAAAAATCGCCACGTTAAGTAGCGATTTTTCCCTTTTGTGAGCCTCAATGAAACGTCAAAGCGTTATAA # Questionable array : NO Score: 5.86 # Score Detail : 1:0, 2:3, 3:0, 4:0.80, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GCTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTATGTTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-2.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [68.3-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,5.28 Confidence: HIGH] # Array family : II-A [Matched known repeat from this family], // Array 1 71453-71753 **** Predicted by CRISPRDetect 2.4 *** >NZ_WLZC01000008.1 Streptococcus halichoeri strain P154 NODE_8_length_71844_cov_81.140232, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =============================== ================== 71453 36 100.0 30 .................................... AATCAAAATTTCTATATCACTTTTATCAGA 71519 36 100.0 31 .................................... CTGTCACTATCACCGCTAACAGCGAGCGTCA 71586 36 100.0 30 .................................... CGCTATCTTTATATCTTGGTTTTTCGTTAG 71652 36 100.0 30 .................................... ACGCAAGCGTGATTAATGCTAAGCGAAAGG 71718 36 86.1 0 .............................TTG..CG | ========== ====== ====== ====== ==================================== =============================== ================== 5 36 97.2 30 GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Left flank : GCTATCGTTCGCGGGGAAGGGCTCACGCGGATGAAAGGATGTAAATGTTCCTTTAAAAGCTATGCTGTGCTTAAAACCAGTCAGATAGTTCAAGTTAGCCAAATTTAAAGAATAGTGATGTGATAGGTAAAGGGGAAATGAGTGAGGCGGACCGTAAATTAGGCGATTTTTACTGTGCTTATCAAGGTAAAAATCGCTCATGCTCCGCCAATTAACCGTAGAGCTGCCGCAGAGAGAATAAAACAAAGGTGGATTCTCAAAATCAGTCCGCCTAGAAATTAATCTGAGAAAGCTGAAAAGCAGGGCAGAATTTTTGCTTACTACAGCAACTAACCCCAATATTGTTTGAGACTTAATCGGCCGCCAAAAACTTCTTAAGCCAATTGATTTCATAAGGTTTTTGCCGTATAATAGTGCTATGAACGGACGATTCAAAACTGAAGTCCAGCTAAGACGAGTAGCGCGATTACGAAAAATTGTGGACAAACCCTGTCTACGAG # Right flank : AAGTGTTAGCTCCGCCTTTCCCCTTTTGATTGCTAAAACTAAAAATAAATTTGAATCATTCCCGTAGTTAGTTATTCCATAGCCATCATAG # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.86, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: F [matched GTTTTAGAGCTATGCTGTTTTGAATGGTCCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-2.00,-0.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0.27 Confidence: HIGH] # Array family : II-A/B/C [Matched known repeat from this family], //