Array 1 38436-38735 		**** Predicted by CRISPRDetect 2.4 *** 
>NZ_POWY01000009.1 Neisseria bergeri strain C2008000328 C2008000328_S13_ctg_2436, whole genome shotgun sequence		Array_Orientation: Forward

  Position	Repeat	   %id	Spacer	Repeat_Sequence                     	Spacer_Sequence               	Insertion/Deletion
==========	======	======	======	====================================	==============================	==================
     38436	    36	 100.0	    30	....................................	GCCGCGCTATGATTGCCTGCCCTCCGACAC	
     38502	    36	 100.0	    30	....................................	CTGAACGTGCGGCGTAGTTTCATCATATTG	
     38568	    36	 100.0	    30	....................................	CGTGGTCAGGCTCTCCAACACGCATTCGAG	
     38634	    36	 100.0	    30	....................................	ACGGTACGTTGGTTGTCGGTGGCCCCGACT	
     38700	    36	 100.0	     0	....................................	|                             	
==========	======	======	======	====================================	==============================	==================
         5	    36	 100.0	    30	GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT	                              	       

# Left flank :   GGGCAGCGATTGTAAACGCAGGGAAGAACGCGACATGGCAGGGCAGGCCGAACAAATGGCGGCAGAGTTGGACAGGCGCGGGGCCGCCGTCTTTTTCCGGGAATATCCGAATGCCAACCACGGCAATGCCCCGTTTCACTCGCTGACCGATTGCGTCGAATATTTGAGGAAGGCTTGGCAGAGGTAGGGAATCAGGGGTGGGCATAAAAGGCTTATCGCAAGATTGGAAGCCAAGGAGACCAAAAAAGCCGTCATCGCCGCATTGATGCGTAAGCAGGCAGCGATTGCGTACCGCACAGACAAGAAAATCAAAGATGACGGCTCATCGCGTGACAAACCGGCGGAAATCCTGATAAGAAAAAAAGGCATTTCTTTTGAAACGCCCGCCTTGCCGCGTGTAAAATCCTTTCAATTGTAAGGATTATGTTATCGATCAAAGGAGTATCTTTTCCATTTCGCAGTGCTACAATAATTCACGCCGTACCAACCCAACCAAATAG
# Right flank :  TACTCCAACGGGAAATCCTTATTCTATAAGGGTTTCCCGTTTTATTTTGACTAAAAAAGTGGCTTTAAAATAATAATAGTTGGTCTGAATTGACCTTTTTTTCTTGGGTTTTCAGTTCGCCCAACAGCAGTTTCATAGCGGCATATTGCTTTTCTGTTACTTCCAAACAGCGGATTGAGCCTTCTTGCGGCAGGTTTGCACACAGCCTGTTGTGGTGTTTTTGCAACGAATCTCGGCCTTTGACGATACGGCTGTATACGGAAAGCTGGAGCATTTGGTATCCGTCTTTTAATAAAAACTGGCGGAATTGATTGGCGGCTTTGCGTTTTGCCGCCGTGATAACCGGTAGGTCGAAGAAGACGATAATCCTCATAAATTTGGCCTCACTCATATCGGTATTCTTTCAATGGTAGGATTTCAGGCAGTTTCAGTTGTTTGGCGTTTTTATCGGTTACACCGGCTTGAAATGACGAAACCATTTTGTCGATGGCAGCCAAGGT

# Questionable array : NO	 Score: 6.06
# 	Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1,
# 	Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats),
# Primary repeat :     GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT
# Alternate repeat :   NA

# Directional analysis summary from each method:
# 	Motif ATTGAAA(N) match prediction:         NA Score: 0/4.5
# 	A,T distribution in repeat prediction:     NA [Repeat is AT rich:55.56%AT]
# 	Reference repeat match prediction:         F [matched GTTGTAGCTCCCATTCTCATTTCGCAGTGCTACAAT with 100% identity] Score: 4.5/4.5
# 	Secondary Structural analysis prediction:  NA [-0.40,-0.90] Score: 0/0.37
# 	Array degeneracy analysis prediction:      NA [0-0] Score: 0/0.41
# 	AT richness analysis in flanks prediction: NA [58.3-65.0]%AT Score: 0/0.27
# 	Longer leader analysis prediction:         NA 
# 	----------------------------------------------------------------------------
# 	Final direction:         F [4.5,0   Confidence: HIGH] 

# Array family : II-C [Matched known repeat from this family],   
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