Array 1 27514-27679 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDZD01000006.1 Sulfobacillus thermosulfidooxidans strain DX contig14, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ========================================= ================== 27514 30 100.0 41 .............................. GTCACCGCGAGTGAGTTTCACATAGGCCCAGAGACGTGTCG 27585 30 90.0 35 G..C....................C..... CAGAATTTGCTCCGAAAATATATTGCCGTTACAGG 27650 30 96.7 0 ....A......................... | ========== ====== ====== ====== ============================== ========================================= ================== 3 30 95.6 38 ATTTGTAGCCTACCTATGAGGAATTGAAAC # Left flank : AATTACCTCGACGTCACCAGCAAGAATCTTTGGATTGTTTCCCAAAAAAGGCACTATCGCTGTAGGATCCGATGCAGATCTTGTCATATTCGATCCCGAAGGCACTATGCTCTGGAGTGCGAAAACCCATCATATGCGTGTCGATTACAATCCCTATGAGGGACGCGTAACCCAAGGAGAGATACGCTATGTGTATTCTCGCGGAGAGAAAATCGTGGATAACGGCCAATTTTTCGGGAAACCAGGTCGCGGTCAATTTCTCGTCCGAAACCATTTTGTAAAACCTTAAGAAATAATGTGAATCACAGATGTTTACTCTTCCACACCCCCATTTGTTGTCGTCGATCCCCAGTAGCGCAAAAAACCCCGGAGATCGACGACAATCCCAAAAATCCCGAAACCCTTATGCAGCAGAGTTTTCGGGATTTCGTCATTCTAAACTTCCAGTACTTTTCATTAAATCTCCGATTGACAATCCTTTCCTAGAGCCGCAAAATGGG # Right flank : CCGAGAGTACGAAGTAAAAAGTTGTAGTGCCGCGTGTAAACTTGCGGGCGGCCGGGTCGTGTTTGCGGGCTCAGGCCCTTTAGGATGCCGAGCGGGCCTGGTCGTGGTCAAATGGTCGCCGCCACGGCTTTAAGCCGCGCCGACGTCCTTGGGACGTCTTGGACGAGGGAGAGGAACACCTTATTCGGGCAGGTGTTGGGGCTCTAGTATGGAGCGAGACAAGAGCGTGCGGTTAAGAGTCCGCTTCCTGTCGTCAGCACGTCAGAACGGCATCATGTTGCAAACATGACGATTCAGGCAAAGTCCCTGCAAGGTTTCGTAAGGTCGTTCATCCACAGTAGGCGCTCAAAGAGGTTCCGGGACTGAAAAGAAATCTATGAGAACAAGAAAGTGAGATAGGAGATCTCTATTTGCAGTATAAAGTGAGACCAATGAATGTCCACGATGCCAATGCGATTGCGCAGTGGCATTATCCTAAACCCTACAGCTTTTACGACTTA # Questionable array : NO Score: 6.95 # Score Detail : 1:0, 2:3, 3:3, 4:0.78, 5:-1.5, 6:0.25, 7:0.02, 8:0.4, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTTGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:60.00%AT] # Reference repeat match prediction: F [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [-0.60,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [61.7-43.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.68,0 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], // Array 1 12103-10203 **** Predicted by CRISPRDetect 2.4 *** >NZ_MDZD01000008.1 Sulfobacillus thermosulfidooxidans strain DX contig16, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================== ================== 12102 30 100.0 37 .............................. GCGCTAATTCCTCCTAACCAGGTGTCCAGGAGTTTCT 12035 30 100.0 36 .............................. CCAGGCGTCACATTCGACGCCTGGACAGGAACAGGA 11969 30 100.0 36 .............................. GACTATGGGCAGGTGGCGAGCAGTATAGCCACACGC 11903 30 100.0 37 .............................. GCGCGAAAGACCAAGGAGGCAAAGTACGCTTTTGGTC 11836 30 100.0 35 .............................. TCATAGCTAGGCATTTTTAATTATGCCTATATGTG 11771 30 100.0 36 .............................. CCCAGGAGTAACATCAAAAAAGGCTGCGCAAAAACT 11705 30 100.0 37 .............................. GGAATTCCTAGCCATGCATATAATGGCTATTTCTTTT 11638 30 100.0 36 .............................. AGTGATGCGGCGCATATGGCCGAAGATGCCTGGCAA 11572 30 100.0 35 .............................. TCCGCGCTCAATAACGCGGGCATGAACTTCAATAA 11507 30 100.0 34 .............................. TACTGAACGGCTAGATAATTTTAAATTTATGTGT 11443 30 100.0 38 .............................. GCCGATCCAATGCGTCAGCGTGGCGGTCGTGCGCGCCG 11375 30 100.0 40 .............................. GCGACGTTAACTGTTTGCGCCGTAGGGAAGACTACCTTCA 11305 30 100.0 35 .............................. TTCGATATCGAGTTTAGATCCGGTAGCGAGTAGCC 11240 30 100.0 39 .............................. TCCGTACTCGTGAACGAAACCTTGGCCAATGACCGGGGA 11171 30 100.0 36 .............................. AAGACCATAAGCAACGTATGCCTTATCGTCAAGTAC 11105 30 100.0 36 .............................. ACGCACATACTCCGCACGCTCCAAATACCGTCGACG 11039 30 100.0 37 .............................. ACCAGCACGGAAAACGCCCCCGTATCGAGGAGCATCT 10972 30 100.0 36 .............................. TCACGGATAGCATTGAAGCGGCAGAGGCGTTAGAAC 10906 30 86.7 46 .......................GA.G..T TGAAACTGGGCATGAGGATTCCCCCCGCGAAACGGATGCGACATCA 10830 30 100.0 39 .............................. AACACCACAACCAAGGCCACCAACATACCCGCCCACAGC 10761 30 100.0 44 .............................. AAGCTGACTGGGAAATAACGTATGCCCAATCGGGTAAATTCTTA 10687 30 100.0 35 .............................. GGTATAGTGATATGAGAATGACTCAACTAATTCTT 10622 30 100.0 34 .............................. AAAAATCCACAGTCCCGACACGAACCAGTAGCGT 10558 30 100.0 35 .............................. ATTACATTCGTGAAGAACAGTATTTGCTTTTGTTG 10493 30 100.0 35 .............................. TTCCCCCCAAAAAAAGACGTATATTCCGAACCCGT 10428 30 100.0 36 .............................. TTACTTTTTTGGTTGTGGTCATTTCTATTCTCCTCC 10362 30 100.0 35 .............................. CCAATTCAACGGCAACAGTAGACACAAATATTCAA 10297 30 100.0 35 .............................. CCGACATGTTTGGAATTCAATTCTAAAAAGGAGAG 10232 30 100.0 0 .............................. | ========== ====== ====== ====== ============================== ============================================== ================== 29 30 99.5 37 GTTCGTAGCCTACCTATGAGGAATTGAAAC # Left flank : AGAAAAACACTTTTTACGCGATACACGTTATGAACTCTTTGTCGCGCAATGGTAAAGGAGCGCAATAATGTTTGTGATTCTTGTTTACGATGCCGGAGTCAAGCGGGATCCCAAGATTCTCAAAACATGCCGTAAATATTTAAATTGGATTCAGAATTCTGTGTTTGAAGGTGAATTGACCGAGGGGAAACTCAAAAAAATTACACCGTGAACTCGGGGATATTATTAACCCGCGAGAAGACATGTATGTTTGGGAGAGCCAGTGGTATCATTCCCGCATTCGTCTCGGACAGCCGAAAGGTGAAGACGGATTTATTCTCTAGGCACCGGTAAATTTGTCGTCGATCGTCAATAGCGCAAAAACCCCTGGGGATCGACGACAATCCCCAAAATCCCGAAAACGTTATGCAGTCTAGGTTCCAGACTTTTATCATTAATAAATGACAACTATTTCCATATATTATTCGATTGACAAGCCTGTTACAGAGCCGCAAAATGGG # Right flank : AGCGTTGGCGACTTCTAGATGGTGACGTAATGGATTTTAATGAGACTCCATATGATATATGAAATAAGCTAAATGACCTTGTGATGAAACGGGCACAACGTCATTTAGCTTGATTTGCCGATATAAACAATGATTCTTCATATGATATAATCGGAATCCCGATTTGTTAGTTGATAGCCAATGTTGTATGAAAGAAATATGACCCAAACGATGAGGAGAATGCGTACGGCAAGCCACCAAACAATCCGTACGGTAAACATGACTACTCGTAGGAGCCACAGAAACATTCGGATGGATAGTTTCAGTAACCCATACAAAATCGCGGCAGTGATCCAAAATACTTTGCTGTACCATGGCAGTCCCGATAATTCCTCCATGAGAATTTACCTCCTAACTAATTTGTTGTGTGAATCTGGTTGTTCCTTAATTCCCGGGCTCTCTTTTTTTGAGTTAGACACTACTTGGTTGTTGATGTGATTAAGGCCAATAAAAGATCCCGT # Questionable array : NO Score: 9.23 # Score Detail : 1:0, 2:3, 3:3, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTAGCCTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:56.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-0.20,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [61.7-61.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //