Array 1 57064-56180 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNBY01000014.1 Parasutterella excrementihominis strain BIOML-A15 scaffold14_size69719, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 57063 29 100.0 32 ............................. TATTTGCTTCCAGCGGGGACATTGGGCGTCCT 57002 29 100.0 32 ............................. ATCCTTATCCTTTTGTTTTAGTCCGGGCAAAT 56941 29 100.0 32 ............................. ACCGAGCCGATGATTAACCTCATCATCTCAGT 56880 29 100.0 32 ............................. GAAGATTGCATTAAACATAATGTCGAGAAGTA 56819 29 100.0 32 ............................. CGACACCCTGACTTAGTAACCGTGAAATCTTC 56758 29 100.0 32 ............................. CCGAAGTCGAGGCCGTAAAAAGGTTTACATTC 56697 29 100.0 32 ............................. GTTTTATCTCTCGGGACGCATCCTTGTGGTTA 56636 29 100.0 32 ............................. AGATGTTTAGACGTTTGACGAATTGGCGCCGG 56575 29 100.0 33 ............................. AACAACAGAGCTGATAGCTTCTGCGGCGTTCCC 56513 29 100.0 32 ............................. ATCACCACCATGAAAGGTAATCCCCTGCTAGT 56452 29 100.0 32 ............................. GTATCGTTGCCGAGACCGGCGCGTTTGAACAC 56391 29 100.0 32 ............................. ATTGAACCGGTCATTTTGTCCCGAGTCGATCC 56330 29 100.0 32 ............................. GCAAACATGGACGCACCTGAGATTGCACGTCT 56269 29 100.0 32 ............................. CGTAATGTATATACGTTCAACTGTTTATTCAG 56208 29 86.2 0 ............C...........GTT.. | ========== ====== ====== ====== ============================= ================================= ================== 15 29 99.1 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : GATTCGAGGATCCGAAATTTTTCACTCGTGAGTACAAAGACTATTTTGGTTTGTCGCCTCGAGAAAATATAAAAAAGATAAGAGCAGAGGAGGGCATCAATTAATTTTTTAGTGGAAAAATCTAGCAGATTTCGAAGAAAGAATTTCTTGGCAGCTATGGGATTGGTTGGTGTGACGCAAATAGGTCTCAGAAAATTTGTGAGCATCCCAACTTTAAATAATTCTGATAGAATCCCTCCTTCCAACGGAAGGATGGCAGAGTGGTCGAATGCGCCGGACTCGAAATCCGGTATACGGTTATACCGTATCGAGGGTTCAAATCCCTCTCCTTCCGCCATTTTTCTACTTAATGCCCCGTTAACACATTTTCTCCTCTCTACGCAGGCTTCGGTATTTCAGAGAAAACTGATAGTATCTTTAGTAGCTTTGTTCTTGTTTAGAAATGTTCTTTAAAAGCTTAGCGGTAAGCCGATTAGTGTAATGTTGTAACCATTTTAAGT # Right flank : GACTTACCCTGCATGAAGGTAATGCTGGAGAGTTCTCCGCTCGAGGAAAATGATTGTCAGAAGCTTAGAAATTACCTAGCTTTTCCTGTTCTGAAGAGAGGGTAAGGTCTTAGATTTTTTCCTTTTTAATTTGAAGTGATTCAATTGAACTTTTCAAAAGGTAAGGTTTCCTTGTGTACATTCAATTAGCAAACTAAGTAATTCTACTTTGGTTTTGGTTGGATCGCTTCGTTGTAAAATCTCAAAATAAATCAAATTCAACCCCTTGACAGCGTCCTTTGTATATATTGGAAAGATTGTATTGTTTCCTCGAGGGTTCGAGCCATGGAAATGGACCTAACAACTAGAATTATCGCCATTGTTGTTCTCATTCTTTTCAGCGGTTATTTCTCTATGGCAGAGATTTCGCTAGCCGCATCTCCTAAAGTTAAATTGCATCAAGCATTAGATGCGGGGGATAAACGAGCACAAAAAGTGCTGGATCTTCAAGTTAAACCAGG # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [51.7-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 6864-7197 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNBY01000020.1 Parasutterella excrementihominis strain BIOML-A15 scaffold20_size44055, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 6864 29 100.0 32 ............................. AAGGACGCTAAGCCTCAAACAAAACTCGACGC 6925 29 100.0 32 ............................. CCAAATCGGGCGGCTGATACACAGCTTGAAAT 6986 29 100.0 32 ............................. ACAAAGAGCATTTTGGGATAGTGCTCAGGCAT 7047 29 100.0 32 ............................. CCACTTGGGAGGAAATCAAAGAGGCAGACGGT 7108 29 100.0 32 ............................. GAAATCTTCTCGACTCCGAGGGCGTCCGTTGA 7169 29 89.7 0 ......................G..G..T | ========== ====== ====== ====== ============================= ================================ ================== 6 29 98.3 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : AGAAGAGTTTTTTCTCGTGTCTCACTGGTTCCTGGTTCAAGTCCAGTTGAGGCCACCACCTTCTTAATTCTATTTATGACAACGCCTCAGTCTTTTGAGAAGGAAAGGTTAAAAACGAATCATTAGAAGTTCTGATAGAATTGCACTTCTGCACAATGGTGATCTCTTCATCATTAGGCCCCATAGCTCAGTTGGTTAGAGCAGTCGACTCATAATCGATTGGTCACTGGTTCAAGTCCAGTTGGGGCCACCACCTCATCTATTAAATCCAATTAATTGAAGTCAGGATGGAACAGATTCTGAACCCCGGCCTTCTGTAAACGTTATTATCCTCTTTCAGGTCAGCAGAGCATTTGTCTTTGAAATTAAATGGCTCTGAAATTTTCTAATCCAGGGAACTGTTCTTGAAATGATTCAAAACAGTCTCAGGGTTCTTTGCATATTTTCCCGATAGGAAATCTTTGCTAGAGTTAGTAAGGTGCTCTATGCCTTGTTTAAGT # Right flank : TCGCTCGGCGTCGGCCTTATTCCCCTGTAAAGAGAGCTCCCGCGTGAAGGAGATGTACCGGTCTCTCAGATGTGAGCAAAAAGAGCCAAAGATTTTTCTAGTAGGTCCAGTCGTAGGCTTAATAGTGAAGATCGTGGCGGAAGTGATCAAAAAAGCAGTCTATGAAAAAATCCTCTCAAAGGACGGAGTTCCGTTAATAAATAACCGCTTTTCTTGTCTTTTATTGTCAACTTGATATTTAGAAATTGTCGGTTATCTCAACCAGTTGCGAAATCTCGAATTTCTTACCCTGCGGACAGGTTCATAACCAAATAAAAAATTAAAGAGAGGTTAACCATCTCTTTTATGTTGAAATTTTCGACTGCTTAATGATCCTAATCCTATCAAAATGAAATAGTCAATTTTCTCAAGGATTTCTTCAGGTTGTGAACACCCCAAAAATTTGGAATTTTTATCTAGGTAAAAAATGATTACCCTTTAAGCCGACAACCTAACTTTCA # Questionable array : NO Score: 6.17 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-14.90,-14.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [63.3-38.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 16289-17537 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNBY01000020.1 Parasutterella excrementihominis strain BIOML-A15 scaffold20_size44055, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 16289 29 100.0 32 ............................. AACCATGCGGTCTTTAGAAGAGGTTCCGAGAG 16350 29 100.0 32 ............................. AATTACCTGAACGGCGCCCACACGTACCGACC 16411 29 100.0 33 ............................. TCTTTGTTTTCCTGGGGTAGTAAGAAAGAGGAC 16473 29 100.0 33 ............................. GGCGCTAATTTGCGCCCACGCCGGTTATCCTGC 16535 29 100.0 32 ............................. AACTCGACGTAATACTCTGAATACGATTGTTT 16596 29 100.0 32 ............................. TCCATTACGGCAACCGCTGCTATCGGCGCCGG 16657 29 100.0 32 ............................. TAAACATCGAGGCTAGATTCTCCTGGAATCTG 16718 29 100.0 32 ............................. TCGATTTGGCTCCACTTGGCCTCTCTTGCCGT 16779 29 100.0 32 ............................. CTGAGACGGTTGACGGGTCAAAATCAACTCTA 16840 29 100.0 32 ............................. CGAGAACGAGGTTTTAAATGGTGCTCAATGAG 16901 29 100.0 33 ............................. CTCAATGAACAAAAAAATGAAATGAATTTCGGT 16963 29 100.0 32 ............................. ATCAACGGATCATTGATGAGGCCATCCGGAAA 17024 29 100.0 32 ............................. CTAACGATTTTGTCAGAAAATGAGCCTACTGC 17085 29 100.0 32 ............................. GAAAGGTACAACGAGATCTGCACATATCGAGA 17146 29 100.0 32 ............................. TATTGGAAGGCGCCCCAGGCATAGATTTAGAG 17207 29 96.6 32 ............C................ GCACAAGCCCGCACGAATATCGGAGCCGCCAA 17268 29 96.6 32 .................T........... GTCAGCAACGTAACCTAGACGATCTAAATCCT 17329 29 96.6 32 ............C................ TCCAACTGGACAATGGCCCACGACGGCTTAGA 17390 27 93.1 32 ...........--................ ACTGATTGATGTTGAAAATCCAACAGCTATGC 17449 29 79.3 33 ........T...C.....A..GC.G.... ATGGATTGGGTCATCGATCATCTCGATGTCAAA 17511 27 86.2 0 .........A.--...........G.... | ========== ====== ====== ====== ============================= ================================= ================== 21 29 97.5 32 GAGTTCCCCGCGTAAGCGGGGATGAACCG # Left flank : ACGAATCATTCCCATGATCGAAAATGTTTTGGCTGCGGGAGGAATCGAGCCTCCTAAACCTGATAAAGATATGTGGGCACCGGCGATTCCTGAACCTGATACGCTCGGAGACCCAGGTCATAGAGGAAAAGGCTAATGACAATGGTGGTCGTAGTTACAGAGAACGTTCCTCCAAGGTTAAGAGGCAGATTAGCGATCTGGCTGTTGGAAGTTCGAGCTGGTGTATACGTGGGAGATGTTTCTAGGAGAGTGAGAGAAATGATTTGGAATCAAATGACGCTCCTCTGTGAGGATGGGAACGTCGTCATGGCATGGGCGACGAACAATGAAACTGGATTTGATTTTCTAACCTTTGGTAAAAATAGACGAATCCCGGTTGAGATGGACGGTCTTCGCTTGGTTTCGTTTATACCGTCGTCTTAATTCGTTAGTTAATGCTCTTTAAAAATTTCGATTAAATGCCTAAAGTATGAATAGACGGATTTATACCGTCTTTAAGT # Right flank : GTGGATTCAGCAATAATTCAAGAAGACCTCCGCTTCTTTCCTCATTATGTTATTGGAGGGGTTGATCGAAAAAACAATTTCTTCTTTCCCTTTACTGCTGAGTTGTACACGTACATGGAAGTGAACCGTAATGATGGATTTTTCAACGGTTTAATTTCAAGTACTAGATGAACCGTAGTCACTTACTGTCTTAGATATTGTTGTTGGAAATCCTTCTGCGAAAAGAGTCGGAATTGATAGAAACTATCTTTCTATTCGTATTAATTCACTATCATCTCCAAAGCCTTTTAGGCTTCTCTTTCTAATTCGAAAAAGAAGGTTTTGCTCAAGAATTTAGTGCGCTAAAAGTATTAATAAAATCACAATATTGATTAAAGAACATACCTTCTATCAGCCAGATGGCTTTGAAGGATGAAAGCTCATCACCCATTGTGCCTATTCATGGTCGAGCACAATAAGCGCAAGTTCTAGAGTTGTAGAATGTTTCTTTTGGGATTTTT # Questionable array : NO Score: 6.14 # Score Detail : 1:0, 2:3, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCGTAAGCGGGGATGAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [6,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGTGAGCGGGGATGAACCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-13] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [73.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1719-1401 **** Predicted by CRISPRDetect 2.4 *** >NZ_WNBY01000029.1 Parasutterella excrementihominis strain BIOML-A15 scaffold29_size58251, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ====================================== ================== 1718 33 88.9 34 .C....---........................... CGTTTTGTCTGCCGCATAGTTTGTGACATCGAAG 1651 36 100.0 38 .................................... GTTACTGGTCATCTTTTCTTCATCGTCATCATCGAATG 1577 36 100.0 34 .................................... GTGGCGACTATGCGTCAAGAATCAGCCGCGTTTT 1507 36 100.0 35 .................................... CCCAACCGGAAAGGCCACAAGTCGTCTTCTTGAAT 1436 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ====================================== ================== 5 36 97.8 36 GTTTCAGTTGTTATTGAAAGAATGTACGATTGAAGC # Left flank : AGGTTGAATTAGAAAGTTTGAATATATTTATTTCAGTGAGTCCACAAATACGAGTCCATTTTTCAAAAGAATGTGGGTCGAAACAGTTTGAATGCTTTGTAGCTGCATTTCTCGACTTCTGTTGAAAGAATACGCAATTAAAGAGGAAACTATTTTCCTGACTTTGACTATCTGCTAAAAATTAGGCTGAGTTTGGTCAGGGGCGGAATTTTCCCTTTTTTGGAATGACGGAACGATCCTCTCTTTGAACTGAGATTGGATCGAAAGAGTAAGAAGGAAAGAGGCGTAACAAAGGGAGAGGTGACTTATTGTGCGATTTTTTAAGGCATTGATAGACGGGTTGCTTAATGGCTTAGCCACTATTTTCTCGGTTGTTATGTTTTTATTGCTTCTGCTTTTAATTTCTTTTAGTTTCTACTTCGTGTTTTTGACTTGATGTCTTCGTTTACATGCAAGGGTGCTTCGACGCCCTTTTTGTGTGGATTCCGGCAATAGTATGT # Right flank : TCCGAAACCAACTGATTGAAAATAAACGATTTTTGACAGTTGGTTTCTGGTCTGTTTTTCGAAAATGGTCGATCTGCACAAAAAGTGCCATTATTTTCGAAAATTTGGGGTGATTGCTTGACTGTTTTTGATAGTTGTGGCAATATCTAGTTACATTCTTTCAACAACGAAATCGCCTTAGGGCGAGCTGAAATCAATTTGATTAAATATTAGATCCGGCTACTGAGGCCTCTTGGCCTTATCCGGATTAACAAGGAGCCTCTATTCGAGGCTTTTTGTGTTGACCGAACCGACATAGATTCAGTTAAGCCATTAGAAGGAATTTACTTTGGTTTCAAAGCAATTCCTTTTTTATCGCGTTAGCCTTACTTTCCGAAGATTTTCGAATGTTTCGAAAATTAGGTTTTATTTTTGTCTGTTGTAACGGTTTTGTTGGGAAAGTGAGAAGAATCCCCTAAATTCGCTAGGAAAAAGGTTTGGACTGTGGTCTTTCTGAAATG # Questionable array : NO Score: 2.95 # Score Detail : 1:0, 2:0, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAGTTGTTATTGAAAGAATGTACGATTGAAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [0.00,-3.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-7] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.68,4.87 Confidence: HIGH] # Array family : NA //