Array 1 1176394-1178285 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR698992.1 Laribacter hongkongensis isolate MGYG-HGUT-02398 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 1176394 28 100.0 32 ............................ TTGCCGCGGGACAGCCGGACACCGGCCCGCAC 1176454 28 100.0 32 ............................ GGATATTCAACCGCGCGGGCCGGCTTGGGGAC 1176514 28 100.0 32 ............................ GCCGCGGGACAGCCGGACACCGGCCCGCACGA 1176574 28 100.0 32 ............................ CATGTGCCCGGACATGCCGACAAACGCCGCCG 1176634 28 100.0 32 ............................ AAAGGCAAGCTCGACCTCTACGACACCTTTGC 1176694 28 100.0 32 ............................ AGGCGTGCCCGGCCACGGCGGTGATGACAACT 1176754 28 100.0 32 ............................ AGCGTGGGCGGCCCGATCGGGGTCGTGAGTGA 1176814 28 100.0 32 ............................ GGAATCGAGCGCATGGGCGCCATCGCGGCCAG 1176874 28 100.0 32 ............................ ATGCTGGAAGCTGCACCAGGTCTGGAAAGCGG 1176934 28 100.0 32 ............................ TTCCTGCAATGCCTGTTTCATCGCCTCTATAG 1176994 28 100.0 32 ............................ TACACACAGATAGGCCCACGGCCATTCACCGT 1177054 28 100.0 32 ............................ TGCATGGATCCACGCAGGTTGGCGTCGTCGGT 1177114 28 100.0 32 ............................ ATCACGTTGCGTACCAGGGTGCCTCCCGTGAC 1177174 28 100.0 32 ............................ CAAATATCTTGCGCAGCGTGGACGCAGATTGC 1177234 28 100.0 32 ............................ ATTTGAGAGCATGCCGGTAATCAAGGTATATC 1177294 28 100.0 32 ............................ TCGACGGAAACGCCGGCATCTACAAGTCGTTT 1177354 28 100.0 32 ............................ ACGCTGACCGGCAAGCTCGCCGCCAAATTCGA 1177414 28 100.0 34 ............................ CCACTGGATGCCGATCCCGTCCCCACCCAAGCAA 1177476 28 96.4 32 ......................C..... AATTCGCGCCCAGGCACAGCTGACGCAGATTA 1177536 28 96.4 32 ......................C..... TCGATAGATCGACCGCAGCTGCTCGACCGCCG 1177596 28 96.4 32 ......................C..... ATGGCGCCGGCCTCCATGATCGAGAACCCGCC 1177656 28 96.4 32 ......................C..... TGGTTGACCGGGCTGAATGAACTCAGTCCGAG 1177716 28 96.4 32 ......................C..... ATGTCCGCCGGTCGCCCGCGCAGGGTCATCAG 1177776 28 96.4 33 ......................C..... TCATTGGAGAACAGGTTGCAAGCCCTGATGGAC 1177837 28 96.4 32 ......................C..... ATCCCCACCCCGTCCGAAGTCCGCTCCGCCCG 1177897 28 96.4 32 ......................C..... ATTGACCATGAGTGGAAGTGCAGTCTGTACGA 1177957 28 96.4 32 ......................C..... CGTCGCCGCAGCCTCGCGGCCCGGCAGGCTGC 1178017 28 96.4 32 ......................C..... ATACACACCCCCTTGAATGATTGATGCGTGAC 1178077 28 96.4 32 ......................C..... CGACAATCTGGACGTGTTCGCGCTTGACGGTT 1178137 28 96.4 32 ......................C..... ACGGTGGCAAAGCGCCCGTCGGCAAATTCGAC 1178197 28 96.4 33 ......................C..... ATCTCCCTCGAGCCGCTGGACCACCGCCTGTGG 1178258 28 96.4 0 ......................C..... | ========== ====== ====== ====== ============================ ================================== ================== 32 28 98.4 32 GTTCACTGCCGGACAGGCAGCTTAGAAA # Left flank : CGGCATGCGCGACCACGTCACACTGGGCCACATCCTGCCGGTACCGGCTGCGGCCAGCCTTGTCCGCGTGCGGCGCAAACAGGTCAAAAGCAACCCGGCCAAGGAACGCAGCCGGCTGATGCGCCGCAAGGGGATCAGCGAAGCTGAAGCGTTGCGGCTGATCCCCGACGACAAGGCCAAATGGCTGGATTTGCCCTACCTGACGCTGGCGAGCCAGAGCACCGGCCAACGCTTCTTGCTCTTTATCGCGCAGCAAGCGGCCACTCAGGCAGCCAGTGGCGAATTCAACGCCTATGCCCTGAGCCAGACCGCCACCCTGCCAGCGTTTTAAACGGAGAAAGGGTGCGGCCAGTCTTCTCATGCGGGCCACACCCTTTTCTGGATGGGTAGATGCTGATCTTTAAAAATCATGAACTTACGCATCCGGTCGGGAAAAGGGTTTTGAGCAGTAAAATCGCTCCATGCCTTGACTGACAAGCCATACCCCCGGAATGGCTCTA # Right flank : ACCTTGAAGTTCGCGTGGTTGGTCAACAAGATCAATACCTTGGCGGTTCGCTGCAAGGACGGAACGGAGCGCCGGGATCCGACGCCGTGAACCATGCGTTCACGGCGTTTTTCATTGCCTGTTCCGTGAGTGTCAGCGACTGCTGCGGTTAGCCGGGCACAGCCCAGACAGTCATTCTTTATTCTTTTTTGGGATTTAAATTCTGTAATTTGTTCTTTGTTGGAATATATCGTGAGCATCAAAATGGTATCACCCTAATCAGACATCAATAGGTGAGCCAGATGAAATCCCGATCCCTGTTTGCCACGGCTGCACTCCTCCTCTGGTCAGTCACCACCATGGCAGATACAACATTGCTCAATGTGTCGTACGACCCGACGCGGGAGCTTTACAAAGACATCAACAGCGACTTCAGTCGTGACTGGCTTCAGCGCGGTGGCGAAGCGCTGACCATCAAGCAGTCGCATGGTGGCTCGGCCAAGCAGGCCCGTTCGGTGATC # Questionable array : NO Score: 6.08 # Score Detail : 1:0, 2:3, 3:0, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.90, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTTAGAAA # Alternate repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGACAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-46.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.24,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 1523000-1523869 **** Predicted by CRISPRDetect 2.4 *** >NZ_LR698992.1 Laribacter hongkongensis isolate MGYG-HGUT-02398 chromosome 1 Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1523000 28 100.0 32 ............................ TCCCGTGACATCGATACCGGCAGCCGGGCCGT 1523060 28 100.0 32 ............................ TCCCGTGACATCGATACCGGCAGCCGGGCCGT 1523120 28 100.0 32 ............................ TCTCCGAAACGATGGTACTGTGGGGCTATAAG 1523180 28 100.0 32 ............................ GGCCGTTAAAGCAAATGCCGCCATCGCCGCCG 1523240 28 100.0 32 ............................ GGTCGCATCGAGGGAGAAACCCAGAACACCCC 1523300 28 100.0 32 ............................ GTACTGGGGCACGGAAGGTTACGGCGTCGAGT 1523360 28 100.0 32 ............................ AAGGTACTCGGTCAAGTCGGCTGCTTTCACGC 1523420 28 100.0 32 ............................ GACAACTTCGTGTGCGTCGCCGGCGAGAACCG 1523480 28 100.0 33 ............................ CCGCGTCGGCGCCGAACAAAGTCAATTGCATCT 1523541 28 100.0 32 ............................ TTGTCCCGGCAGTCAAACAGGAATCGCCCGCC 1523601 28 100.0 33 ............................ TGCTCCGGCGCCGCTGCCAGCACGTCGCTGTAT 1523662 28 100.0 32 ............................ CAATCCAGTGCCTTTGCGGCAGCTTCTCCAGC 1523722 28 100.0 32 ............................ AACGGCCAGCACCACCCCATGCGAACGGTCCC 1523782 28 100.0 32 ............................ CAGCGGGCTAATGATTCAGTGCTATGTAGACC 1523842 28 82.1 0 .....................GA..TCT | ========== ====== ====== ====== ============================ ================================= ================== 15 28 98.8 32 GTTCACTGCCGGACAGGCAGCTCAGAAA # Left flank : GAGTTCAGCTGCCAGCCGCCGCGCCAGAATCCACCAGGTTTTTTCCGGCAGGCTCGTCAGCGGCAAGGCGAAAAAAGGCGTCTTGCAGGGCGGCGTAGTCGCGCAGGGTGAGGGCACGCAGGTCGGTGTGCGCGCAGTCGCACAGGCGCGAGAGCATCATGATTTCGCGCTCCTCGTTGTTTTTGGCCAGCTGGTTGACGTCGAGCTGGTCGCCCAGCGTGGGCTCGCGCATGCGCAGCTGATTGACGGTGATGCCGTTGAGCTGGACGGGCTTTTTGAGGGTGATGACGATTTCGTTCATGACGGGGCTCCTGGAATGAAAAAACCCGCCGGGTGGGCGGGTTGGAAATGGTTGTTTGGGTTAATCAACGACCCTTTTTCAAGGACATGTTTTCCATCCTTGAAATTCAATGACTTGCAGGGGTGGGGAGAAAAAGGGTAATTGCATGGGTAAGCGGTGACTCGCTTGTTTTTACAAGGAAAAACGCAGAAACTCTGTA # Right flank : TGATTCAGCGATCTGGTGGACTTGGTCTGACATCGCGTTGAAGGCTTCTTTGATTACCATGACTTTATCGCCCGGAAGAACCCGTCACCAGCAGCATGAATCCATCCTTTGTCATCTGGTATAAGGGTTGCGGCTTCCCCCTCTCCAGCAAATGGGTGCCCACGGCGGATATCGTTGCTGGAGGAATTTGGCGCTACCTTTTCGGATCGCGTTCCTTGGCCGTGGGCGTAAAAAACCGCGACCGGAATCGCGGGGTATTGCTTACAACCCGATGGCCGCCCGCTTGGCGGCGAGTTCGTCGGTGCCGTTGATGATGCGCACGCAGTTGACCGGGTCTATTTCGTAGATGGCGCGACCGTCGATTTCCAGCTTGTAGTAGCTCAGGCTGGCGGTGTACTTGGTTTCGCCTTTGTCGCCAGGCTTCCAGCTGCCCATGTCGACTTCGGCATCCATGCCACCGGCCCGATAGCCGTCGGTCTTGCGCTTGAGCTTGGGTAGCT # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGGACAGGCAGCTCAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTTCACTGCCGGACAGGCAGCTCAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [58.3-51.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.65,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //