Array 1 3369674-3369514 **** Predicted by CRISPRDetect 2.4 *** >NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== =================================== ================== 3369673 30 100.0 35 .............................. GTAAATCAACATGTTTTATGGACTTAGTATCAATG 3369608 30 100.0 35 .............................. TGGTGTGAAGAATATGAAGATAACAGGAGAAGAAC 3369543 30 96.7 0 .........................A.... | ========== ====== ====== ====== ============================== =================================== ================== 3 30 98.9 36 GTTCTTAGCTTACCTATAAGGAATTGAAAC # Left flank : GGTTTCATCAGAGATTGATCGCGGTTGTGACTGCGTTAAAAAGTGCGAAATACATCTTTTATAGTCGCCATGATGCTCACCTCACCTTATGGTTACCCTCTATAGTTAGTTAAATATGCTCCGGAATCGGAACAAAGAAAGGTATAATGTTGCGGGGACAAAATAGACGTAGACTTTTTTGGGATTTCTGAACTCAAACCCGGCTTTATCTATCGATCATAAGATTAAAATGGAATAGAATAGGTGCCAGAGGATGATTCAGTTGTTATAAATATGTTATTATATGTTAAGAACGGCACGCTACTTGGAGTAGAAAACAATAGGGTCGGAGAAAGGGAGAAACTCTAATCATTTAAAATTGTCGTCGATGTGCAGTAAGGTAAAAATACCCGGGGACCGACAACAAGGGATATGGCTTAACCAAGCGTTTTGTGGAGAAATAACTTTTTTTGGATTTGTTGTGCCTAGCCATGACTACTGATTTTGTGCGGGTGAAATGG # Right flank : TCCAGTTGCCGCTTTAATCGGCCATTTGTGACATGTTGAAATCATATAACGAAGTAAGAAAGCCTATTGATCTGCTGCTAGAACATTTGGTAGCCATGGCATCCAAACTAAATAGCTAAAGAGAATTCCTCTACTTAATGTTCCGCTTGACAATTACATACTGGAATCTTAGGCTGTTTCTAACCAGCGATCTAAAAAGGACGTAGTAAGCCGACGCCGTAAACCCACAGGACGTTAGCTGAGATGGCTAAGTAAAATTTTGGAGTGCGATATATTGCGAATAATGAAAGCAGTCATTGATTGCATACTCTGATGAGTCAGGAAATACTGGGTTAAATATCTTCGATTTAGCTTAACCCTTTTTCTGGACAGGAACAATTCTATCGGAAGTAGATATTGACTCACAAAATAAACAGGTTTTTGAAGAATGTGTAATGCTTTAGGAGGTTGTTGGGGCATGGTTTAGTCTTCAATATCCTAAGTATAGGCCCATCAGTAAA # Questionable array : NO Score: 8.31 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCTTAGCTTACCTATAAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.20,-0.60] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : NA // Array 2 3373302-3373138 **** Predicted by CRISPRDetect 2.4 *** >NC_018017.1 Desulfitobacterium dehalogenans ATCC 51507, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ======================================= ================== 3373301 30 100.0 39 .............................. GACAGTCTCTTTGGGACTACGATATTAATTCGGCCTATC 3373232 30 100.0 35 .............................. AATCGATATTTTTCAACATCCGTTACTCTATATTG 3373167 30 83.3 0 .................A......GA..CA | ========== ====== ====== ====== ============================== ======================================= ================== 3 30 94.4 38 GTTTTTAGCTTACCTATGAGGAATTGAAAC # Left flank : TTAGAACACTTTCCCCGGTAGTATTATACAGTACGCTCCTTAGACCGGATGGCAGAAAATATACGGTGTATTTCCAACCGGGGGAGACGGATTATACCCGTTTATTCAATGAAAATCTTCGCAAGAAATATCGGGCTCTTTATGGAACTGGAGAACCAGAAGGGGAGGTGGAGATCAGACCTATTGGAACGCAAAGGATGAAGATTATAAATTATAAGAACACGGTAATTAAAGGTTATGCCGGTAAGCTGCTTTTAATTGGGCCAAAAGAGTTGCTTCAGCTGGCCGTTGATGGAGGAATAGGAAGTAAGAACAGTCAGGGGTTCGGATGTGTGGAGGTTCTAGACGGTTAATAAAAATGTCGTCGATGTGCAATAAGGTAAAAAAGCCTGGAGAGCGACGACAGGAGATAGGGCTTAATAAGCGGCCTGAGGCAAAAATGCTAATTTATAGAACTTTAGACGCTTGCCGTAATTGCTGATTTTATGCGGGTAAAATGG # Right flank : TGGAGTATCATAGTAACACCATCTAAAGCTTTTTATTTACTGATAGAGGTAGGATTACCGTAATGCCTGCGGTAATCCCTCCGGGGTGAAAAAAATGGCGCATGGATATTGTGGTAAAAAGGTGTTCTACGACAGGCTAAGATTAATATTAGGATTTTGAGCAAAGATTTGGGGTATGGGGGATTCTTATGGAGTTATTGGCTAAACCAGGTGTTGGTGGAATCATTGAGCACACTTTGAATGAAGTTCATTATATTTTACTTCAAGAGCGATATAAAGATGATGCCCCATTAGAATCAGGCATGATAGAAATCCCGGCTGGCAAGATTCGCGAATTCGAAAATATCTTTGATTGCTTAAGACGTGAAATATTTGAAGAGACCGGCCTTGAGGTAACGGAAATTGAAGGGGAACATGAATCAATTATCATAGAAATGAATGGCTATAAAGTAGTGACCTATACACCTTTTGCGTGTTCTCAAAATATTAAGGGTGATTAC # Questionable array : NO Score: 8.08 # Score Detail : 1:0, 2:3, 3:3, 4:0.72, 5:0, 6:0.25, 7:0.02, 8:0.4, 9:0.69, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTAGCTTACCTATGAGGAATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: R [matched GTTTTTATCGTACCTATGAGGAATTGAAAC with 92% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: NA [0.00,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.91 Confidence: HIGH] # Array family : I-B [Matched known repeat from this family], //