Array 1 434758-433882 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENHX010000003.1 Lysinibacillus sp. HST-98 Scaffold3, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ======================================== ================== 434757 29 100.0 37 ............................. CATGAATTAGCTCGGTGCAGTCGTTTACTCGTAAACG 434691 29 100.0 36 ............................. GTGATAAAAGCAAAAGAATTATCTCAATCAGAGTTG 434626 29 100.0 36 ............................. GCTAAAACTGAGTATGAATTCCCAGAGTTTGATCTG 434561 29 100.0 36 ............................. TACACAGTTGATCGACACGCTCTGTCACTGCCTGTC 434496 29 100.0 36 ............................. GGACTTGTTTAACATCACTTATGTGTTGTACTTCTG 434431 29 100.0 36 ............................. GATGGCACTTTAATTAGATATGATGCGATTAATCAC 434366 29 100.0 35 ............................. AAGTATTTGAGGAGCGATTTGTTGAGTACGACATT 434302 29 96.6 35 ..................A.......... TCAATTTCAAGCAGGATTGAGACTTGAGCATTTGT 434238 29 96.6 40 .....................T....... CAGTAACAACAGCAAGTCATATCGCAAACTCGTTAGGTTG 434169 29 100.0 37 ............................. AATGGCTCTAATGCTAATGCAAGCTCCCTTAAATTCC 434103 29 100.0 35 ............................. GTTTCACCAGAGCGTGATGCTGAATTAAAGTCTGA 434039 29 100.0 35 ............................. AAGGTAACTTAATCAATATGATGAAAACAGCAGGG 433975 28 96.6 37 .....................-....... AAGTAAATAGGTTAGGAAGATATTGTCCAACTGAAGG T [433950] 433909 28 75.9 0 CA....T....G.-......C.......C | ========== ====== ====== ====== ============================= ======================================== ================== 14 29 97.5 36 GGTTTTCATTAACTAAGTGGAATTTAAAT # Left flank : CATTTTTTATTAACTATGTGGAATTTTACTTACTTCAAGTTCTTACTTTCTTAAAAAAAAACTACAAAAGAGCCTACTTGAGACTATTTCGAGTAGGTTTTTTACATAGCTGATTACTTTTAGTAATTCTAACAAACTTCATTTAATTTCCTTTACCCTCTTCACTAAACGCCGATTACACATGATGAGGATGTAACACAAGTAAGGCAAATTTATAAAGCATGAAAATATTTAACATAGATACAAAACTCCCTATGAGAATGTGGTCGACATGACCTATTACTTGAATAAAATGGATTTTCTCCTCTTTATAAAAATTGCAGTGAATCATTTTACAACATTAAATCCCTTCAATGCTTTCCATGCCAAGCATTGAGGCACTTGAATAACAAAGGGAAATTTTCAAACTACAGATTGACTGCAAAAAAATGATATTAGTCTCAAAGTACAACCTGATAAAGCGTTGAAAAATAAGGTTTTTTTGATTATGCTTAAGGTGG # Right flank : CCTTGCAATCTATTATTCGCTAAAAAAACCAACAACAACCCAATCCCCTCGGTCATTGCTGGTTCTTTTCATTTACATTATTTCTTGCGTTTCACAAATACAATAACAAAAATAGCGGCTAGTGCTGCTAGGATGGCGATCATCCATACTGTGTTTGAGTTGGATGTTGTGTCATCTGCTGCGGCTGCTTGTTGCTCTTCTTTTGGAGTAGCGTTCGAAGACTCCATTTCTTTGGCATCCTCTTTCACCACTTGTGCAGTGCTAATTTGCACATATTGTAGTGTTGCTTCATTCGAGGCGGATGCTTCATGCTCGTGGCTGTCGCCATGGCCTTCTGCATGATCCCCATGGCTTTCCTCTTGCCCACCGTCATGTCCATGATGGTGATCCGCTCCTGTTGTAAAAATAGAACGTTCTAGCTGTTGCCCTACCCAGCTTTTGGCATCTGTTGAATCGGCAAAGATGCGAGGGTGTCCTGACAGCATGTATGTTTTACCGTC # Questionable array : NO Score: 3.14 # Score Detail : 1:0, 2:0, 3:0, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTTTCATTAACTAAGTGGAATTTAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:75.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.40] Score: 0/0.37 # Array degeneracy analysis prediction: R [9-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [58.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.68 Confidence: HIGH] # Array family : NA // Array 2 442225-443490 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAENHX010000003.1 Lysinibacillus sp. HST-98 Scaffold3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ============================================== ================== 442225 29 100.0 35 ............................. GTAGGTTTAGCGGTTGCAGGAGTGGCTGCATTAAC 442289 29 100.0 35 ............................. ATGACTGTTAGTCTGGCTGTACAAGGTTACGCTAC 442353 29 100.0 34 ............................. GTTGGTGCAGGGCTGATGAACATCGTCAATAATA 442416 29 100.0 34 ............................. ATTACAGCAGCAATTGATTGTCGCTGATTATATA 442479 29 100.0 37 ............................. TACATCACCAATGATGGAACTAAAGGTTTCAACAATT 442545 29 96.6 35 ...........G................. CGTAAAGTTAATGATGTAATTGTTGGATGTGCAAT 442609 29 100.0 36 ............................. AATGAATTATCATGAACGACTTAGCGTCGGTAAAGT 442674 29 100.0 36 ............................. GATGATTGGACATTTTATAACGAGGAAATGCAGCAA 442739 29 100.0 35 ............................. ATGTTCTTGCGGGGTGTCGAGAGAATGCATTCATG 442803 29 100.0 36 ............................. GACGTAACTGCTCAAATTTTCTGGTTAAAGAACCGC 442868 29 100.0 36 ............................. ATCAAACTACGGCAAGTGGATTTACAAATGGTGGAT 442933 29 100.0 36 ............................. CGCTTCACCATTTCGTAGTCGTCTTACCGTATTTTC 442998 29 100.0 36 ............................. AAATCAACTTTAGCTAACTGATCAGGGATTACAGGC 443063 29 100.0 36 ............................. TTGACATATTCGGTTGTTGGTACTAAGTGACTTCCA 443128 29 100.0 36 ............................. AGCGTACCAACTAATTCAGTTAAAAAATTCCAAATA 443193 29 100.0 35 ............................. AACGAAGGTACTCCAGAAATAATAGTTCAATTGCG 443257 29 100.0 37 ............................. ATTTCACCACGTTGAAATTGAGCCTCCACCTGTGACT 443323 29 100.0 35 ............................. GGAGCATTTACTCAACCATCTGGCAATCTCGAAAT 443387 29 96.6 46 ...........................G. TGCTGAGGATTCGTCATTCTCAGCAACTTCAATAAATACCGTCATT 443462 29 96.6 0 ...................T......... | ========== ====== ====== ====== ============================= ============================================== ================== 20 29 99.5 36 GTTTTACATTAACTAAGTGGAATATAAAT # Left flank : CAACTTGGGCATATGATAATGCAAGAAAACGAAAAAATGGAGAGGTTACTTCAACAATTAGAGTTGATCGCTATACAGAATATCCAGTTGTGACCTATCAATATACAGAGGAACTCGGCTTAATTTTTGTAAATGATGTAGATGCCTTCTTTCAATAATTATGGAAAATACCATACAAGGAGTGAAAGCATTTGCAATGGGATGATTTAAAGGCAACCGGTTTGCAAGTCCAATATTTGAAAGTATGCGAGCGCAAGCTATGGTTACATTCACATCAACTTGGCTTTGAGGATGAGGACGATAAAGTACAGCAAGGGAAGGTATTGCACGATACGTCCTATCAACGCCAAAAATCAAAAGAAGTATGGATAGAAAATTTAATTCGGATTGATATGATGGACAAGCATTATGTAGGAGAAGTGAAATCTAGTAGTAAAATGGAACAGGCTGAGTGGAATATAAATGCGTCACAGGATGATGGAGATATTTCTGCCGCAAGG # Right flank : TAGACTCTAAAACCCCGATACCAACCCAAAAAACGAACAGCATACCCTTAACCGCTTTTCATATTTAAGCCTAAAACCACCCCACTTTCATTAAACCGTCAAACATTCCAAATAAACGCCTGCATATTCCAGCAATTTTACACAAAATTGAATAAGCACAAGCATGTTCGGTATATAAATAGGGTACGAACATTTTTTGGTTAGGAGTGTGTAAATGGCTGTACTTGTGGTGAAGAGGAGTATTATGCATCGTTATCAAAGTATCGGGCAGGCGATTGAAGAGGCGGCGCCTGGGGATATGATTGAAATTCGGGATGGGATTTATGAGGAAAGCTTGGATATTGCCAAGCGGCTGACGTTGTATGGGGTTGGCAATGTGACCATCAAGGGTGGCGTATTTATTCGCTATCAAACACCTGTCGCGATGCGTAATTTACGGTTCCGGCAAGGGCAGGGGCTGTATGTGAAAGGCGATTTACAGCTTGAGAATTGTGTGATTG # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTACATTAACTAAGTGGAATATAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:79.31%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-0.50,0.00] Score: 0/0.37 # Array degeneracy analysis prediction: F [1-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [53.3-56.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.41,0 Confidence: MEDIUM] # Array family : NA //