Array 1 66492-65448 **** Predicted by CRISPRDetect 2.4 *** >NZ_QICL01000026.1 Dysgonomonas alginatilytica strain DSM 100214 Ga0181043_126, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 66491 47 100.0 30 ............................................... AGATTTTAGAATGGTTTCATTACCTCTTAA 66414 47 100.0 30 ............................................... TCAATTCGTAAAAGTATTGGGTGAAACATC 66337 47 100.0 30 ............................................... TTATTGAAGCCCTATACATTGAAGAGGGTA 66260 47 100.0 29 ............................................... TTACCAAAGATGAAGCTGTGCGAGAGTTA 66184 47 100.0 29 ............................................... CAAAATAGCGGGCTACACGATAAGTATAT 66108 47 100.0 30 ............................................... TAGCTTTTTCGTAGTTACCGACCGAATCGC 66031 47 100.0 29 ............................................... TTCTATTAACTCGGTTACAGTGGCTTTGT 65955 47 100.0 30 ............................................... TTGTGGAAGGATTAAGCGTTGACGATGCTA 65878 47 100.0 30 ............................................... ATGCACGAAATTCTACCTCGTTAGCGTCAT 65801 47 100.0 30 ............................................... CTGCTTTCGAGTCAGTTACAGCAGAAGGCG 65724 47 100.0 29 ............................................... GCTTTTGGATTCTACTTATCAAAGTTTAA 65648 47 100.0 30 ............................................... TAAACTTCCTGTAACTATGGAATATATTGA 65571 47 100.0 30 ............................................... TTATCAAATAGATCTATTATATCCTTTACG 65494 47 100.0 0 ............................................... | ========== ====== ====== ====== =============================================== ============================== ================== 14 47 100.0 30 GTTGTGATTTGCTTTCAAAATTGTATCTTAGTTCATTGAAATACATC # Left flank : TCGAAGAAAAGGGAATCGGTGTTATTAATGCGTCGCCCTTTTCGATGGGGTTACTCACTCAACGGGGAGCTCCGGATTGGCATCCGGCATCAACGCCATTGAAGGAATTGTGTAAAAAAGCTATGCAGTATTGTTTAGGAAAGAAATACCCTATCGAGAAACTGGCTATACAATATGCAATAAGCAATCCACGGATTACAACTACCTTATTCAGTACGGCAAGACCTAGTGCAGTCTTGAAAAACATTGAATGGGCAAACGAGCCGTTAGATGAAGAGTTGCTGGGTGAGGTAAAAAAGATATTACAGCCTATGCATCGGGATACATGGTCAAACAGCTAATTGTTGTGGATATAAAAACAGGTGGATACAACGTAAGACAGTATGCTTTCCCAACCAAGCGGTATTGTCAGACTTTGGATTTGAAAAATGTTCCTCAATTAATTGAAGAGTATGTAAGACGACATAGTAATGAAGAGCACTGGGATGTTATTTATTCAG # Right flank : ATACCACACGACAAGCACCTGTATTTCAATATATTGCAAATACCATTAGCATTTGAAAAATCAATGTATTTCAAATAAAAATCCCGATCAAAGTCGGGATTTTTATTTTCTAAAATAATTCAAGTTGCTGCGCTCCTGTTTTCTTTGATTCTGGGCTTTTCCCATAAAATAGTTCCATCATACCAAACTGTTTATCTGTAATACAGAGTATTCCGACGTGCCCTTTTGTCGGAAGAAAATTTTTCACTCGTTTGATATGTACATTCGCATTCTCAACACTCATACAGTGTCGTAAATAAGTCGAAAACTGAAACATGGTAAATCCATCTCGCTGTAAGTTCTTCCTAAAATCAGCGTATACTTTTCTATCTTTCTTCGTCTCGGTAGGTAAATCAAATAATACTAGAACCCACATAATACGGTATTGATTTAATCGGTCTTGCTCCATATTACCGACAGATTACAATAATTCGGGATATTTAATTTTACGTAGTTTCCCT # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGATTTGCTTTCAAAATTGTATCTTAGTTCATTGAAATACATC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-1.60,-2.90] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [68.3-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : NA //