Array 1 20019-23887 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKWD01000011.1 Acinetobacter ursingii strain TUM15501 sequence011, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 20019 28 100.0 32 ............................ TGGAGTGAAATTGTCTCAGGTGGAATATGACG 20079 28 100.0 32 ............................ ACAAAAATGGTTTTTAGTTATCAATGATTTGC 20139 28 100.0 32 ............................ AAATACAAAGTTAAAGTTGAAACAGTCACAAA 20199 28 100.0 32 ............................ GCATTGTCTTTGATCTTTAGGGTATCAACCGC 20259 28 100.0 32 ............................ TTATGATTCACAGACTTGGACAATCAAAAAGA 20319 28 100.0 32 ............................ GCTATGTGTGCCGATGGCTACACGCGGAATAC 20379 28 100.0 32 ............................ GATTAAGATCACCAACAAAGGGGCGATTCAAG 20439 28 100.0 32 ............................ TCAATGGCTTCAATTGTTTTGGATTTCGATTG 20499 28 100.0 32 ............................ TATCGCAAAATCACCACCCAAAGTTACTTTTC 20559 28 100.0 32 ............................ TTGTTTCGCAGTTAAAGCTTTAGTCGAATCAT 20619 28 100.0 32 ............................ ACTGATGTTTTTGCCCGCATAAAATACGTGAT 20679 28 100.0 32 ............................ CCCCATTCGGATACTCAGAAGTTTGGGGAGTA 20739 28 100.0 32 ............................ AGCATCAATCAGATCAGCAGCAAGGTTTAAAA 20799 28 100.0 32 ............................ AGTTGGAAGAAAAAGCGGTTAAGGCTGCATAG 20859 28 100.0 32 ............................ TTGTTTCTTAGGCAACGGACGAACGTCATAGA 20919 28 100.0 32 ............................ CTCAACGTGTTTCGTATAACAAAAAAGAAGTT 20979 28 100.0 32 ............................ TCCAGTAGCACAGCAAGTTGATCAAAAAGACT 21039 28 100.0 32 ............................ TGGCGTGATTTTGATTCAATCAACTACTGATA 21099 28 100.0 32 ............................ AGTACCATCTGGGTTGCCATTTTTCGCAATTA 21159 28 100.0 32 ............................ CATAAGCGAAGCTTGAAAAGCGTCTTTTGCTT 21219 28 100.0 32 ............................ TGAACCATTAGAACTTGTTGATGTGCTAGTGC 21279 28 100.0 32 ............................ AATCAAACGGATTATCAGTAGTTGATTGAATC 21339 28 100.0 32 ............................ TGGTGCAGCGTGGATATGAATAGTGTATGTAT 21399 28 100.0 32 ............................ ATGAAGCGTTAATGATCGACCAATGTCCAAAA 21459 28 100.0 33 ............................ ATTTCAATGTGAAAAAGGACAAGCTCAGTCTCA 21520 28 100.0 32 ............................ ATAGGAATTTCACAGTACAAGGCAACATGGTC 21580 28 100.0 32 ............................ ACTAAAAAGGTGGATACTTGGTTGATGGATAA 21640 28 100.0 32 ............................ ATTCAATTACGTTGCCTCGAATCGTATCTGAA 21700 28 100.0 32 ............................ ATTCAATTACGTTGCCTCGAATCGTATCTGAA 21760 28 100.0 32 ............................ GTCAGTAGTAAGCGTACCCACAACGCCTGAAA 21820 28 100.0 32 ............................ TGTTCCAATCGTGGCCACTTTTCCAGAATCAT 21880 28 100.0 32 ............................ AGAATAGACCAATAGCAGAAGCACCAGTAATA 21940 28 100.0 32 ............................ GAAAATATGTTCTACCGTAGATTTGACCAAAA 22000 28 100.0 32 ............................ AGATGACGGCTGTACTCGCACTCAAAACGGTT 22060 28 100.0 32 ............................ GATTTTAAATTCGGCTTCGGGCGATAACATGA 22120 28 100.0 32 ............................ AGCTAATCATCGGGGGCAATCCAGCTTATGAA 22180 28 100.0 32 ............................ TGTGCAATTATTTTGAACGTTGGGAGTGTCGT 22240 28 100.0 32 ............................ ACGTATGGATGCTTTGGAGCAGGAATTAGTCA 22300 28 100.0 32 ............................ ATGACGTAAGAAATCATGTTATCGCCCGAAGC 22360 28 100.0 32 ............................ TGTACCAGAACCGTCACCATCGCCACTTCCTG 22420 28 100.0 32 ............................ ATCGCCACTTCCTGAACCATTTCCACCTGTAC 22480 28 100.0 32 ............................ TCCAGTACGTCAGATTTATGCAGATATTAACG 22540 28 100.0 32 ............................ TTTAAGAATAGATGTGCAGAGTTTTGACTCAT 22600 28 100.0 32 ............................ TGACCTGCTTTCCATCGATGACAGCATTTTCA 22660 28 100.0 32 ............................ TGTGTGCTTATGTGGCATAGTATCAAGCACAC 22720 28 100.0 32 ............................ GCGAAAAGGTTGATCTGGAAATGCGTAAAGCA 22780 28 100.0 32 ............................ AATAACAGCAGTTAAAATAGCGACAATACCTT 22840 28 100.0 32 ............................ GTTAATGCGCTTCCAGTCGCCTAGTTTATTTA 22900 28 100.0 32 ............................ TTTTTATAATATAGGGGTAGCGGATACGCAAC 22960 28 100.0 32 ............................ TACATACGACTTATAAAACTCAAGCATGTGAT 23020 28 100.0 32 ............................ GCCCGCTTTAGCTAACTTGACAGCAACAGGCA 23080 28 100.0 32 ............................ TAAAGCAACTTCTGAATATATGTATACAAATT 23140 28 100.0 32 ............................ TACGTGCGTAGGTGGTGATGTCTGGCGAATAT 23200 28 100.0 32 ............................ TGCTTGGGTCAGGGCAATTGCATTGAAGATGC 23260 28 100.0 32 ............................ AAATGAAATCATTAGATAATTATACAATTTAA 23320 28 96.4 32 ..........G................. AAGCAGCTATTTTTTCTCGGTCAAAGTGGAAT 23380 28 96.4 32 ..........G................. TGTAATGGCTCAGAATCATTAATCTTATATCT 23440 28 100.0 32 ............................ TACATACGACTTATAAAACTCAAGCATGTGAT 23500 28 100.0 32 ............................ GTTACTGGTGATGAATCTAGTCAAGTTGATAT 23560 28 96.4 32 ..........G................. AGAAGAATGGAACACCAGACTTATCACTTGCA 23620 28 96.4 32 ..........G................. AATAGTCTTGCTGAAAAGTTAAAGGCTGCTTT 23680 28 96.4 32 ..........G................. ATCTAATGGTGGCTGTATGAAGCAATACTTAC 23740 28 96.4 32 ..........G................. GAGAGGACAAAAAATTATTCACGCTGATTGAG 23800 28 96.4 32 ..........G................. ACTCTAAATAATTTTCTGGATTTTGCCCGAAT 23860 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 65 28 99.6 32 GTTCATGGCGACATACGCCATTTAGAAA # Left flank : TAGAGTAACTGAATCTAACTCATTGGTTAGCAAGGCTGCAAGATTATGTACATATCTTATCTGCTCGTAAAGTTCCTGAGGATAAGATCAACGGCTATGCTGCTTATTTTAAAGTTAATCCAAAATTGACAATTGAACAGCGTATTGTTCATCAGGCAGAACGCCGTGGAATCTCAATTGAAGAAGCACAGGAACACTTTAAAGCATTGGATCTGACGGAGACTTTTGAACCTTATATTAATATGAAAAGCCACACCAATGATATGAACTTCCGTTTGATTATTGGGAAAAAATGTATTGATGAAGCAAATATTGGAAAATTTGGAAGCTATGGATTAAGTCGTACATCCACAGTACCCGAGTTTTAACCCAATATTTTTTACACTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTTAAAACTTTGGGTATTTCATACTTTTTAGGGATAAAGCACTGTTATAACTTTATTTTTTGCTTTATTCTTACT # Right flank : ATGCAAACGACGAATAAGAGCTTAAGCTGATTGATTCACGAGAGTAGAATATGGAATCTAAATGATCGTAAAAATGAGTTAAAAAGGAATGATATAAACAAAAACGCACTGCTTCTGGCGAAACAGTGCGTTAGGTTAATAAGATTATGCTGGTAAGTCAAACCAGATCATTTCACTATCTTCAAGTGCATGAATCGTAGTTTTCTCATCAAACAATAAAGCATCACCTGCTTTAACAATTTGATTCTCAATCATAATTTGACCTTTAATCACATGTACATAATTGTGCTTTTGAGTTGCAGCAATCTCAAGTATTTTATCAGCTTCTAATACAGCCGCTTTCACTTCTGCATTTTGGCGAATATGCATAGCAGCATTATCATTTGGTCCTGCAATCAAGTGCCATTGGTTTGGCTGTTCACTCGGATCAAGTTTGATTTGTTGATACGTTGGTTCAGCATCGCGTACATTTGGATGAATCCAGATTTGAAACAGATGCA # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCATGGCGACATACGCCATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: F [matched GTTCATGGCGACATACGCCATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-6.70,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [76.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 4200-4885 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKWD01000014.1 Acinetobacter ursingii strain TUM15501 sequence014, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ========================== ================================== ================== 4200 26 100.0 34 .......................... TCAGGCATTGCACGTTCTACCCATAGTTGAGGGT 4260 26 100.0 34 .......................... TATAGCGCGAGTGAGTTTGAAATTGTTCCACAGT 4320 26 100.0 34 .......................... CAAGACAGTTTTCGCTTCTGGGGTTCGCGTACGT 4380 26 100.0 34 .......................... AACAGGAAAGGGGCGTACTTTAGTTATTGGTAGT 4440 26 100.0 34 .......................... GTATCGACTTATGCAGTTGAAAATCCTAATTCGT 4500 26 100.0 34 .......................... GTAGTAATATACAACCAAACCAATTTTGGATTGT 4560 26 100.0 34 .......................... AAAACGTGCCGTCGCTTTCAATGTGTGTCGTGGT 4620 26 100.0 34 .......................... TGTTAAAAATATCTATAGAATAATTCGATCAAGT 4680 26 100.0 34 .......................... AGCAGGAATTTCTTTTTTAAACGACTTAAATAGT 4740 26 100.0 34 .......................... AGTTCAAACGATCTTTGAACCCAAATACACAGGT 4800 26 96.2 34 ..................T....... CCGATTTTTGGCAATAAAAAAGCACCCGAAGGGC 4860 26 76.9 0 .................AT...TTTT | ========== ====== ====== ====== ========================== ================================== ================== 12 26 97.8 34 TTCCTATCGCATAGATAGCTTAGAAA # Left flank : TAAAAATTCAGCTTTTTCGCTTGGTAAAAGTTTTGCATCCAGAATCTCGGCATCTGCGGCCCATTCTAGAGAAAGCGTTTGTAAAACTAGCGCAGAGCTTTCTGCAAAATAATCTTCGGTTCCCTGACCTAAATGAGCATCGTATTGACGTAATGCAGTCACTCCAAAACGAATAAAATCACGAATTGTTGTTAAGTTTTCTGCGGCTTCCTGTAATTGTTCAGGATTAATGGTCGGTCGCTCCACTCAGGGGTCTCCAAAAGATGATGATGCAAAACGGCTTATGATACCTTGTTTTGTCTTGCTTTTTAATGCCTAAAGCGAGTGGATTCAATTTTAAATCAAGTTGACTTATTGCTCTTTTTTAATCAATATTTTTCTTACTCTTTAATAATATAATAAAATCATACGCTTATGATTTAACTTATTTTTAAAGCATAATATCAAATTATTAAAATAACTTGTTGTTATTAAATGATTTATTAATAAGAGTTTATAGT # Right flank : TCGAGAATCCAAACATTTTGTTTTTAATTGCTGCATCGCTAAAGGATCCATCGGTGCAGTCATCATGGCCCGATAAGCCAAACATTCCTGCGTTTCTTCTGTTGCTTGAGATTTGGCATTCAAGCTATGGCATCCCATCAGTCCCAAAGAGAAAATACATCCTAGAATAAATTTGATGAACATTGGATTTTCTATAAATCAGTATTTGTCGATATCAACTCCAATTTTAAAACGCAAAATAGCAAATAGAAACCATTGAATAGACTTGTTTCATAAGTCCCTTTCATTTCTGCCTATGGGAGAGAAATAAAGAGGGTTTAAACAATGATGAAAGACGTCATAGTGTATAGATCTTTTAAAATTTGCTTATTTTCATAAAATCTTCTGCCAATATATAAGCATTTTAAAAAGATGAGCTTAATAAAATGACAAATCCAGATATTCAAAGTGTAGAACTCACAAAAGCCTATCGTTTACTTAATCATGGCCCAACTGTACTG # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTCCTATCGCATAGATAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.29%AT] # Reference repeat match prediction: F [matched TTCCTATCGCATAGATAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [88.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //