Array 1 1084303-1088480 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP056185.1 Citrobacter sp. RHBSTW-01013 chromosome, complete genome Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 1084303 29 100.0 32 ............................. ACGAATCCTTGAGAGCTGGTATGGTCGCAATT 1084364 29 100.0 32 ............................. ATTTTATAGGCACACCCGCCGATAAAATTGCA 1084425 29 100.0 32 ............................. TTCTCGCGCAACGACAAAATGATGGAATTCTC 1084486 29 100.0 32 ............................. CGCACATAGGAATTGCTGTGCCACATCGGCTG 1084547 29 100.0 32 ............................. GGTCGTCACCAGCAGGATGTCGTTATCGGCGT 1084608 29 100.0 32 ............................. CGGGAGTATATCTACCGTACCACAGGTAAAGA 1084669 29 100.0 32 ............................. TTGATTGAAATGCTGAAAACTCGCCAATTCCG 1084730 29 100.0 32 ............................. GGCTTTGAGTATCAACCTAACTGCCAGATCAA 1084791 29 100.0 32 ............................. GTCAGCCAGCGTGGTGTCGATGTAGGCATAGC 1084852 29 100.0 32 ............................. CTCGCTATTACACCTCGGGTGGTGATGGTTTC 1084913 29 100.0 32 ............................. CATGCTGGTTACTGCCCAGGTCATCAGCGCCT 1084974 29 100.0 32 ............................. AGCGGAAATTTAGCCTGATAACCATATGCAAA 1085035 29 100.0 32 ............................. CACCGTTACCGGGTCGCCGATTTTCGGCGCGC 1085096 29 100.0 32 ............................. TTTTTGCCGTTCGCCGGCTTCGCTTGCAACAC 1085157 29 100.0 32 ............................. CCTTTAGCATCGCTGATCTTGCGAACACGCCG 1085218 29 100.0 32 ............................. CATCTTGCGGGCTTCCCGTTCCGTTGGCGCGT 1085279 29 100.0 32 ............................. GAGATCTCGACCATTGATATTTCCGTTATTGG 1085340 29 100.0 32 ............................. CCACAATTTTAACCCCACGCAAAACGCCGTGA 1085401 29 100.0 32 ............................. GCCAAAATCACCGGGGAGAATGAGGCGCAACC 1085462 29 100.0 32 ............................. GGCTTTCTCCGCTGCCATTTCTCATGATTACA 1085523 29 100.0 32 ............................. CGCGGCTAACTCACGATCTATACGCTCACCCA 1085584 29 100.0 32 ............................. TAGATCGCATTACGATTAGCGAGCTACATAGA 1085645 29 100.0 32 ............................. GCCACCAGCGGCCCTACGTTCGGCCGCTTCTT 1085706 29 100.0 32 ............................. GTCGTGCAGTACCAGCAACAGATGTTGATCAC 1085767 29 100.0 32 ............................. TCTAAATTTGAGTTTCACCCGGCGACGGGTGG 1085828 29 100.0 32 ............................. CAATGCCGCCTTCTTCCGTGCTCAGGCGGTGC 1085889 29 100.0 32 ............................. GTGGAGAGAGTGATAAGCGCCGTAGATATCGA 1085950 29 100.0 32 ............................. CGGGGACACCGGTGCGGGAGACAGTGAATCAG 1086011 29 100.0 32 ............................. TAGCCCTGCGTTACGTCAGCGCTACGAAACGT 1086072 29 100.0 32 ............................. AAGACGTTTAACTATTTACAGGACTGGATCCG 1086133 29 100.0 33 ............................. CTGATCACTATACCCTTGAATACCACGCTCAAG 1086195 29 100.0 32 ............................. GAATCTACCAGGTTAATGAGCATGGAGATGTC 1086256 29 100.0 32 ............................. ACTTCATCCGGATCCGCGATGAGTACCGGCGA 1086317 29 100.0 32 ............................. CAATCTATTCAGTTTGTGCGTCATACCATCAT 1086378 29 100.0 32 ............................. CGTGTTTATCTCCAGCATTTCCCCGGCAGTAA 1086439 29 100.0 32 ............................. AGGCACGTCTTCGGCAATTTGGCTGATACCCA 1086500 29 100.0 32 ............................. GATTTGATAAGCCGCTGATTGACACATCAAAC 1086561 29 100.0 32 ............................. GCGCTGGGGGAATTCACCCGCTACGGCAAATC 1086622 29 100.0 32 ............................. CCCGCCAAGATAAACCTCAACGAGCAATTCTT 1086683 29 100.0 32 ............................. CGGGAACCCACTGGCGTACAACACCAGTTCAG 1086744 29 100.0 32 ............................. GTATCAACCACATAGATATGACCATCACGCGG 1086805 29 100.0 32 ............................. TACTGAATGACTATGCCGAAACGCTGGAGAAC 1086866 29 100.0 32 ............................. TTGGCGATCATTTTCGGTAACAGCGGGGCCGC 1086927 29 100.0 32 ............................. CTGTTGCGCTCTGAACTCCGTCAGATTCACAA 1086988 29 100.0 32 ............................. TGGCCGCAACCGGAACAGGCGGCGCAGGCGGA 1087049 29 100.0 32 ............................. CTGGCCCGATAATTCTCCGCACTGTCGGTGGC 1087110 29 100.0 32 ............................. ACCTGGCGCCGGGTTTAAATCTTCCAGTACGC 1087171 29 100.0 32 ............................. TACCAACGTGTGCTGGTGGCACGATCTCGTGA 1087232 29 100.0 32 ............................. TTGCTTTTGCCATTCTGTTATCGCCCCTTATG 1087293 29 100.0 32 ............................. TCATCAGCCTTTACAACTGGTACATGCCCGTG 1087354 29 96.6 32 ..........T.................. TGCAGAGGGCGCGGCGCGCGCGCACTTCTCGG 1087415 29 100.0 32 ............................. GGTGAGGGTTCTCCAATCGAGTTGGGCCTTGT 1087476 29 100.0 32 ............................. TAAACGGCTCGGGCAAAAAATATCAGCAGCAG 1087537 29 100.0 32 ............................. GGGCGATAAAGCAAACTTCCGGGACCGTTAGT 1087598 29 100.0 32 ............................. CTCTTAATAAACGCGTTTAGCGGATTAGTCTC 1087659 29 100.0 32 ............................. TTGAGCGTGCAATTCTGGAGCATGCCGGGCTG 1087720 29 100.0 32 ............................. ATGTAGATATGGCCGCAGGTGGTTATATGCAG 1087781 29 100.0 32 ............................. AGAACGGCGGCGGGTACTGGCTGGGCCGGATT 1087842 29 100.0 32 ............................. CGGTACTTATCTTAGCCCACCGAACGCCGTCA 1087903 29 100.0 32 ............................. GAATGGCCAATAATTTTAAATTCAGCCAGCGC 1087964 29 100.0 32 ............................. AATTCATTGTCAGTATGTTGCTGTTGATAGTA 1088025 29 100.0 32 ............................. AACGCAAACACACCCTTGATGCCGCTGAATTT 1088086 29 100.0 32 ............................. AGTTGATGCGGCAAATCGTTGCGGCCGAAATG 1088147 29 100.0 32 ............................. ATCACCTCGACTGTTCAAAACTCGATAGTAAA 1088208 29 100.0 32 ............................. GCGGTCTCTATGTCGATGCGGTGGACTGAATA 1088269 29 100.0 32 ............................. CTGGAAGTCCCGCGTGATGTGATGGATGTTTT 1088330 29 96.6 32 ............A................ CCGGAGGTTCTGATGGTGTCCGAAACCATGTC 1088391 29 93.1 32 ..T................A......... GAACATCCTGAAGTACACATCAAAAACGAACC 1088452 29 86.2 0 ............T............T.TA | ========== ====== ====== ====== ============================= ================================= ================== 69 29 99.6 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : CATTGATTGAAGAAGTACTGGCTGCCGGGGAAATTGAAATCCCTAAACCTTTTGCAGATGCCCAACCTCCGGCGATCCCTGAGCCTGTTTCATTGGGCGATGCAGGGCACAGGGGGTAGCGCATGAGTATGCTTGTTGTTGTCACCGAAAATGTTCCTGCTCGTTTGCGCGGTCGTCTGGCTGTCTGGTTATTAGAAGTTCGCGCAGGTGTTTACGTTGGCGATACCTCACGTAAGGTGCGAGAAATGATCTGGCATCAGGTCACTACCCTGGCAGACGAAGGGAATGTTGTTATGGCTTGGGCGGTGAATAATGAGTCTGGTTTTGATTTTCAAACATGGGGTGAAAACAGGCGCATGGCGGTGGAACTGGATGGATTAAGGTTAGTGTCATTCCATCCTTCGTAAAATCAATGGGTTATATTTCTTTAATAATGTGGAAAATTTGGTGAAATTTTTCTACGGCTATAATCCCTTTTAGATCAGTGATATAGTTTTAGA # Right flank : ACTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTTCCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCATCGTCGAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACAGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [71.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //