Array 1 536410-540585 **** Predicted by CRISPRDetect 2.4 *** >NZ_FWGG01000003.1 Klebsiella pneumoniae strain VRCO0036, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 536410 29 96.6 32 ............................T GTAGCTATATTAGCGACACCATAACTGAAAAC 536471 29 100.0 32 ............................. GATCCCGACCCTCTACTGCAGAGCGAATACGA 536532 29 100.0 33 ............................. CATTTCTCGGTGAAGCGTTCGCTTTCTTCGTCG 536594 29 100.0 32 ............................. CCTTCGGGGATGGTTTCCAGACCGGAATAAGA 536655 29 100.0 32 ............................. TGGCGGCGCAGCTTGCCGCGCTGGATATACAC 536716 29 100.0 32 ............................. GCATTAATAATCCCCAATGGTCCAATAACCAA 536777 29 100.0 32 ............................. TTCGCATCGCTGATCGGCAAAACGGAAAAGGC 536838 29 100.0 32 ............................. CCGGAGATTTACCTTATCTCTGAGAAATTAAA 536899 29 100.0 32 ............................. AAAGATTCCTCATGAACCCGCCGACGGGATCA 536960 29 100.0 32 ............................. CGGTCATGTTGATCGAGGCGGGGCTGAGCACC 537021 29 100.0 32 ............................. CCCTGCTGATGGCTGTAGTTGGATAAAACCAC 537082 29 100.0 32 ............................. TAAAATGCGTTATGATGTACTGTATGCATGAA 537143 29 100.0 32 ............................. GCTGGTCTGACAGGCTACATTAAGCTGAATTG 537204 29 96.6 32 ............................A GGCGGCACCTGGTCGATAAAAGGTGATGGCGA 537265 29 100.0 32 ............................. ATTTTGGGCTTCAGCAGGGAGCGTTAACTCCT 537326 29 100.0 32 ............................. CAAGACCAGTACCGGCTACCAGCCGCGGATCC 537387 29 100.0 32 ............................. GCTCGTTGTTTTCCCGTCGAACGCGCCGGAGA 537448 29 100.0 32 ............................. ACAGTGTATCGCCCATACTCTGCGCGTGCCGC 537509 29 100.0 32 ............................. CCAGGGTTTCTTCTTTGGAGGGTAATTAATCA 537570 29 100.0 32 ............................. GTTCCACTCGTTAGCTACCCACGAGTTCCCAA 537631 29 100.0 32 ............................. TCAGATTACTGCAAACCAGTTCAGCAAACGAC 537692 29 100.0 32 ............................. TCTGACCAAAATCCACCCTGGCGCGCTCGACG 537753 29 100.0 32 ............................. GTGATGATATGGGAAAATTTGTTGTTTGCCCG 537814 29 100.0 32 ............................. AACTACCGAGATACGCATCCGCCTCCCCCTGG 537875 29 100.0 32 ............................. CACCTTTGCCGCGGGCGCCGGTCAGTGTCTCC 537936 29 100.0 32 ............................. ACATCCCGAATTGCGAAGTGGTTATCGAGCGC 537997 29 100.0 32 ............................. TTAGATAATTGGTTGTTGATGAAAGCACCTGA 538058 29 100.0 32 ............................. ACTGCGCTCAAGCTCTTGCTCTTTGCCAATCA 538119 29 100.0 32 ............................. GTTTTGTGCGCCATGTGTCCCCACTTGGCGCC 538180 29 100.0 32 ............................. AGGGTATAAATGACGTTTCCGGCGGGGCATTC 538241 29 100.0 32 ............................. GGCGAAGTGTGGGCCGTTGCGCGTGTGTACGA 538302 29 100.0 32 ............................. CGGTCAGCGTAGTGCGGCCGAAGTGCTTTATG 538363 29 100.0 32 ............................. AAAAATTCGAGCGTATGGGGGCGGCCGTTATC 538424 29 100.0 32 ............................. ACGGGTTGTGCTTGTCTCAGCCCCGGCGAATG 538485 29 100.0 32 ............................. ACACCATTATCCTGATAATACTCCTGGAAAAC 538546 29 100.0 32 ............................. GTCTGGTCATAGGACGTTTATTTGGCGACCAG 538607 29 100.0 32 ............................. CGTGTTCGGGTCTTTTGCGAAACCGAAGTCGG 538668 29 100.0 32 ............................. AGTTTCTGAGATCTCCTGAAGGGTTTTAGAGC 538729 29 100.0 32 ............................. CCTCACCCACCTCTTTGGCCGCCTGCTCCAGT 538790 29 100.0 33 ............................. GCCGTTCGGGGCCGGGGTGCCGGTGAGGTTTAC 538852 29 100.0 32 ............................. ATTTCATCGCCGCTCTGCTGGCAGCTAAGGAG 538913 29 100.0 32 ............................. AAAATGTGCGAGCTGTGGGATGACCTGAATGA 538974 29 100.0 32 ............................. AGACGCGGCAGAACCTGATCCCTCTCAGCCGG 539035 29 100.0 32 ............................. CTTTGCCCGGTGATAACAAAATCAGCAACTGC 539096 29 100.0 32 ............................. TATTCTCGGAGGTGTTCAGGCTGCTCCCTGGC 539157 29 100.0 32 ............................. ATTACGCAGAGCAAATGGGATTCACTGTTACT 539218 29 96.6 32 .............T............... TCAGGCGACCAGGTCGTCATGGACGTTTATAT 539279 29 100.0 32 ............................. CCTCCGGATTCATGTCCCATCTGGGCAATGAA 539340 29 100.0 32 ............................. GGCAAAAAACGGATCCGCCACGTGGAGTGGGA 539401 29 100.0 32 ............................. CACCAGGCCGCCGTCTTTGATGACGCGCATGT 539462 29 100.0 32 ............................. AGGATCGGGATTTTCCCGGCGTTCCATCGCTT 539523 29 100.0 32 ............................. CATCGGAGGTGATAAATGCAGACAATTATCCA 539584 29 100.0 32 ............................. ATTGATCTGCAGGAATACAACGCAGCCACTGA 539645 29 100.0 32 ............................. CGATCATGGCCGCGCATACGGTACTGACAGCA 539706 29 100.0 32 ............................. TTCTGGCAGGTCGACGACGACAACAATCAGGT 539767 29 100.0 32 ............................. CGGCTGATCTGCGGCCGCCTGGATGTGTCCAA 539828 29 100.0 32 ............................. GCGTTGAGAATGCTGCGCAGCGCATTAACCGC 539889 29 100.0 32 ............................. AGATGAGTTGATGAAGCGTAATAGCTTCCAGT 539950 29 100.0 32 ............................. GGAGGCTCTTCCAGTAGCGGAGCCAAAGAAGC 540011 29 100.0 32 ............................. TTTATGTCTTCTTACGCGATAGGCACGGTAGC 540072 29 100.0 32 ............................. CGCACTTTCACGATGATCATGCGTGAGGCGGT 540133 29 100.0 32 ............................. CCAGAAGAGGAGGCAACGCTGGATCTTATAGC 540194 29 100.0 32 ............................. TGGTCAGGGCTGATTGCAATGGACCGGGCAAA 540255 29 100.0 32 ............................. CCGAGCCTGAGTTTTGTGAACGGCCCAGCCAG 540316 29 100.0 32 ............................. GGATTTCCATCTCCGGCGTCTGACTACGTTGA 540377 29 96.6 32 ..........A.................. TCTGACTGTCGAGGCATGATGTGCCCTCCGAT 540438 29 96.6 32 A............................ ACGGTCCGACAGAACGGCGCTGGAATCTCTCG 540499 29 100.0 29 ............................. GGGGTCACTTGGGTGAAACTGAACTAACT 540557 29 72.4 0 ..A........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 69 29 99.4 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : TGTTCTTGCGGCAGGCGAAATTCAGCCACCCCCACCACCTGAAGGCGCACATCCTGTAGCTATCCCACTCCCTGTCTCTTTAGGTGATGCAGGCCATCGGAGTCGTTAACGATGAGTATGTTGGTTGTGGTGACAGAGAATGTTCCTCCGCGACTCCGTGGACGGTTAGCCGTCTGGTTGCTGGAGATTCGCGCTGGTGTGTATGTTGGGGACATCTCAACAAAGACACGAGAAATGATATGGCAACAGGTTTCCGTTCTGGCAGAAGAGGGGAATGTTGTTATGGCTTGGGCGACGAATACCGAATCCGGATTTGAGTTTCAGACATATGGTGTGAATAGACGTATTCCGGTGGATTTGGATGGACTGCGGTTAGTATCTTTCCTTCCTTTTTTAAAACAATGAGTTATATGCTCTTTAATAATGTAAAATTGTTTCTTAATTGTTGGTGAATTGTTTTTCAGTTAAAAGCTATTGATATTGAAGTCTATTTTTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGGGTGGTACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCTGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTGGCAGGGATCGCTGACCGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCTTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATTC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [2-11] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //