Array 1 6287-7170 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEMJ01000353.1 Thermus scotoductus strain 14_S14 NODE_76_length_10425_cov_42.7874_ID_151, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 6287 29 100.0 33 ............................. CCCAGGCGGCGGAAGGGGAGAGGAAGCCCCGGG 6349 29 100.0 32 ............................. GTGATGAGGACCACCTCCTGGGGAGAGACCCC 6410 29 100.0 32 ............................. CTCCCGGGCCAGGGCCACGATGGCCTCGTCAT 6471 29 100.0 32 ............................. TCCACCGTAGGCCCGAGGACCACGGAGAGTTC 6532 29 100.0 32 ............................. GTACCAGTTCATCTACCCTCTCCTAGTCTATC 6593 29 100.0 31 ............................. GTGTCGGTGGCGAAGGCCTCCCCCTCGTGGC 6653 29 100.0 32 ............................. CGCCTGGCCCGCTCCACCGGGTCATCCTCAGG 6714 29 100.0 32 ............................. TTGATCTCCTCGGGGTCCATTCCATAGAGGGC 6775 29 100.0 32 ............................. CGCTCAGTCAACGGAGTCCGGGGAACGAATGC 6836 29 100.0 32 ............................. AGGGGTTGACCGTTGGCGTCCTTGAGCTTCCG 6897 29 100.0 32 ............................. GGCCAGGCTCACGGCGTCTAGGAGAGCCCCCA 6958 29 100.0 34 ............................. GATGAGCCGCTCCCTTCTCCTATCGGGTATCCTC 7021 29 100.0 32 ............................. GGAGCCCGCCGCCCTGGCCCTGGCCGATCCCT 7082 29 100.0 32 ............................. GCGGTGGTGATGCCGTTGAGGGTGGAGGGGGT 7143 28 89.7 0 ......................-...T.A | ========== ====== ====== ====== ============================= ================================== ================== 15 29 99.3 32 GTAGTCCCCACGCACGTGGGGATGGCCCG # Left flank : TGCCCACCAAGGAACAGGTCCTCGAGGCCCTAAAGGTGGTCTACGACCCGGAAATCCCCGTGAACATCGTGGACCTGGGCTTGGTCTACGATGTGGAGATCCACGAGAACGGGGTGGTGGACGTCACCATGACCCTCACCGCCATCGGTTGCCCCGCCCAGGACATGGTGAAGGCAGATGCGGAAATGGCGGTGATGCGCCTTCCCGGGGTGCAGGGGGTGAATGTGGAGTTCGTTTGGACGCCTCCCTGGACCCCTGCTAGAATGACCGAGGAAGGCAAGCGCATGATGCGCATGTTCGGGTTCAATGTGTAGGGGGCTCAGCTGGGTGGTATAGTGGGCCTCGAGGTGCGAGGGAGCCAGGCGCGTACAGAAGGCTTTTAGGCTCCGGATGTGCGCCTGGGCTCACGCACGGGGGATCTTGAAAGGCTAATCTGGACTGGCTCCCTTTACATACACATAGAGGGGGGTCGGCGGGGGTTTTTGCCGTCTGGGTCATGT # Right flank : AGGCTGGGTTTATGGTGGCGCACCGTGGATTTGGCGATAGGGAAGCTGGGGTGGTTTCAAGCCTCGTTTTCTTCCTGCATGGGTCCACTCCCCAGGTTTCCAGGTAGAAGGCTCTCAGTTCCTCGGGTGATATCGGGGAGATTTCCCGTGGAAGTGGGCTTCCGGTTCGGAACCTCTTGCCTGTTTTCCGTTGGACGGAAAGCCCTACCTCACCTTTCCCCTTGTTTCGGGGATGGATCCAGAGGGGTGCGGGGGTTTCTACCGCCTTGCCCGGTTTACGGGGCTCCCTCTTCGGATCTGGCACTGGCTGGGCCTGAGCGCACCACCAGGGTGTCGGCGATGAGGTCATGCCAGGCCTGGCGCTTAGGGTGGAAGAAAGCCCAGAGGTAGCCAAGGAGGAGGGGCAGGGTGGAAAGGGTCTTGCCTACCACCTCCCGCATAAAGGCGGTGAGCCAGTCCACAGGCTGGCCGTCCGTGCGGACCACCTTGAGGCCCAGGGC # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTCCCCACGCACGTGGGGATGGCCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTAGTCCCCACGCATGTGGGGATGGCCCG with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-3] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [41.7-41.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 1742-1283 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEMJ01000334.1 Thermus scotoductus strain 14_S14 NODE_59_length_12409_cov_55.6366_ID_117, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 1741 29 100.0 32 ............................. GAGGTTCCCAACGCCCGGACCAACAGGGTGTT 1680 29 96.6 33 ............................A GTGGTCCGCATGGCCCTGCCCACCAGCCTCTCC 1618 29 100.0 33 ............................. GAATCGCAACTTGACTCTCCTGCTCCCATGAGC 1556 29 100.0 31 ............................. GGTAGAGGATCCCAAGCCCCCGCCCCCAAGA 1496 29 100.0 32 ............................. CCGATCCGCGCCTGCTCTAGGTCGGCGTAGGC 1435 29 100.0 34 ............................. CAGTACCTCAGCGGCCCTGGCCTACATGCGCCAC 1372 29 100.0 32 ............................. CAAGGTCACCCCGCTCGCTCCCAGGCGCTGGA 1311 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================== ================== 8 29 99.6 33 GTAGTCCCCACGCCCGTGGGGATGGACCG # Left flank : GGATCCTACCCGCCCGGGGGGCCTTTGGGACCTCGAGGGCGAGGTGGAAGGCGGAGTGGCCTATGGTGGTGATGATCCTGGAGAAGGTTCCGAGGAGCCTTAGGGGGGACCTCACCCGCTTCTTCGTGGAGGTGGACACTGGCGTTTTCGTGGGCCAGGTGAGCGCTTTGGTCCGGGAGCTGCTTTGGGAGAAGGCTCTGGAGAAGGCGGGCGAGGGACGGGTGGCTATGGCCTACAGGGCGAACAACGAGCAGGGCTTCGCCCTCAGGCTTCACGGCTACACGGACCGGTTTTTGCGGGACTTTGATGGTATACTCTTAGTGAGCACTCGGAACGCCGAGGCAATGCGAAAAGCAGAGAAGTTGTCCAAGTTATTTGCGAGGTACGAGAAACGCCGTGCCAAAGCTTCCGAGGGGGATCTTGAAAAGGAAAATCCGTAGCCACTCCCAACTAGACACATAACGGGGGGTGAGCGGGCGTTTTTGCTGTCCTGGTCAAGT # Right flank : GGCAGGAGGTAGAACCAAATGGGTGACGACTCCCCGGACTAAAGTCCAGGGCTTCTCGGGCATGGTATTGCTACCCCCGAAGGCCCCGTCCAGGCCCTTGCCAGGATGTTTTGGGCAGCGGCCACATCCCGGTGGAGAAGCGCCCCACACTGGGGACAGGTGTACGCCCGCACCCAGAGAGGCTTCTTCTCCCTATGGCCGCACACCGGGCAGTCCTGGCTGGTGTACTTGGGGTCTACCTTGATGACTCGCCTACCAGCCAAAACGCTACCGCTTGCGCGGTGAGCCGCCGCTTTGTAGGCGAGGATTGCGAGAAACTGGGCCCAGCCCGCATCGTGTATGCCTTTGGCTATATGGGAGCGGGAAAGGGCTTGAACGTTCAGGTCTTCGTGGACGATGGTTCCGTAGCGGTTCACCAGCTTTCTGGCCACCTTGTGGTGGAAGTCTTTGCGCTGGTTGGCGATCTTGCGGTGGAGCTTGGCTACCTTGAGCCTGGCCTT # Questionable array : NO Score: 6.24 # Score Detail : 1:0, 2:3, 3:0, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTCCCCACGCCCGTGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [4,4] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCACGCCCGTGGGGATGAACCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.60,-11.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [40.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.41,4.87 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 11491-11762 **** Predicted by CRISPRDetect 2.4 *** >NZ_PEMJ01000334.1 Thermus scotoductus strain 14_S14 NODE_59_length_12409_cov_55.6366_ID_117, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 11491 29 100.0 31 ............................. AACATCAGAAAGGCGGCGCACACGAACATCC 11551 29 100.0 32 ............................. CCCTCTATGCGGTGGCCCCCTAGTGGAGGACC 11612 29 100.0 32 ............................. GCCGCGGCCCCCAGGTAGGTCAGGGCTATGGT 11673 29 100.0 32 ............................. ACCGGCGCTACGAGGCGCTGGAGGCCCTCCTC 11734 29 100.0 0 ............................. | ========== ====== ====== ====== ============================= ================================ ================== 5 29 100.0 32 GTAGTCCCCACACCCGTGGGGATGGACCG # Left flank : TTGGGGTAGGGAGCGGGCGAGCTTCTCCAAAGCGGTGCGGTACTGGCGGGTCGGGGCCTGGTGGTAGATGAGCCTTCCGGCAGCGAAAAGGGCCAGGGCCTCCACGGGATGGAGAGGTGGGGAACGATCCGGGATAGCGTACTCTCCTCGGCGGCGGCGCTCCACAGGGTAGCCGAGGTCTATCAGGGTCTTAAGGTCTCGCTCCACGGTACGTTCGCTCACGCCAAAGCGCCGGGCAAGCTCTCCTACCCGCATAGGCCGGAGCTTCAGCGCCTCGGCTAGCTGAAGCAGTCGGGCGCTTTTCGCTTCCTGTCCCATATCAGCAGTTTAAGGGAGTTTCCGGAATTGCTGCGTGAAGGTTAGCCGTGCTAGACTACAGGTGGTGCCCCCTTTTCCTCCCCTTCTTCCGGGGCTGCGGAGCTTGACGACATTACCTGTTCTGCCTCCCGAAAAGACACATAAAGGGAGGTAAGCGGGCGTTTTTGCTGTCCTGATCAAGT # Right flank : GGAAGTGAGCCCGGAAAGGGCAACTGGGGACGGGGTCAGGGAGCCTTTTAGAGCGGGATATGGCCCATGGGTCAGGGGTCACGGGGAAGCATACCTTGCAGCCCCCGTTCTTCAGAACGGGGAGTTGTCACGGCTAAAGCGGGAAAGGGGGTCCGGTTCCCCCACGAAGGCGTGGGCGGTCATGGGGGAATGAGGACGGCTTGTTCGGGAGCCAGGTGGGTTTCGCCAGCAAAACCCCCTTGCCCTTGAGGACCAAGGCCACCTCCAGCCTTTCCCGGTGGTAGGGCAGGGACTGCTCCTTAACGGTACAGATGAGGACCGAGGTGCCCAAAGGGGTCTCCCCCACCCCCTGGGCGGCGAAGGGCCGGCCCGGGGGCACGGAGAAGTTGGCGAACTCCCCGGGGTAGCGGCGGAAGATCCCCTCCCCCGTGGCCGGAACCAGGGCCCAGGCCCGGCCGGCCAAGGCGGAAACCAGAACCCCACCTGCAACCTGCAAGAAC # Questionable array : NO Score: 6.06 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTAGTCCCCACACCCGTGGGGATGGACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTAGTCCCCACACGCGTGGGGATGGCCCG with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-11.20,-10.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-40.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.51,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //