Array 1 18715-11284 **** Predicted by CRISPRDetect 2.4 *** >NZ_RHPO01000033.1 Empedobacter falsenii strain WF_348 NODE_33_length_31369_cov_46.262975, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =============================================== ============================== ================== 18714 47 100.0 30 ............................................... GATAACATACGCCAATCGCGACGCATCAAC 18637 47 100.0 30 ............................................... ACGTTACGAAAATGCGTCTGATGCCAAAAT 18560 47 100.0 30 ............................................... ATTGATTTACACGAATGGAATTATTTAAAA 18483 47 100.0 30 ............................................... TATTAATGGTAGTGCAACTTATAGTGGTAC 18406 47 100.0 30 ............................................... ATTAAAGAACTATGAACTACAAAGAAATAG 18329 47 100.0 30 ............................................... ACGACTTACAATATTGAAGCTGAACGTGAA 18252 47 100.0 30 ............................................... ATTATGGAATTAAACAAATGGTATCATAAT 18175 47 100.0 30 ............................................... CCCAAATCAATACATTGGTTTTTAAAACTT 18098 47 100.0 30 ............................................... TAAAATAAGTTTTATATCTGAAAACACAAT 18021 47 100.0 30 ............................................... AGTGGTACGTTAACTGGAATCGGGAAATTA 17944 47 100.0 30 ............................................... TGTACTTCTTCTTTGATTTTTTTAGTAAAT 17867 47 100.0 30 ............................................... ACTAAAGACAAAGGAAAAGTTTTTAGTTGC 17790 47 100.0 30 ............................................... AAGTCTTGCACATCATCTTTAAAGTTAAAC 17713 47 100.0 30 ............................................... ACTTCTGTTTCTTTAACTTCAGTTAAATCG 17636 47 100.0 30 ............................................... TAAAAATGGGTTAGGCAAAACAATAGCCGA 17559 47 100.0 30 ............................................... GTGTCAATGGTGGAAACACTAAATAATAAA 17482 47 100.0 30 ............................................... AAAGGCGAATATAAACAACATAAAGGGTAT 17405 47 100.0 30 ............................................... TGTAGATGGTGGATCTATTTTATTTGAGAC 17328 47 100.0 30 ............................................... TAGATTTCATAAGTATTGTTTTGATTATTC 17251 47 100.0 30 ............................................... CGGTACACAGAGACGAAAAAACAATGCATA 17174 47 100.0 30 ............................................... TTTGGATGGACATCATCCCCTTTTGACTTC 17097 47 100.0 30 ............................................... TAGATTTCATAAGTATTGTTTTGATTATTC 17020 47 100.0 30 ............................................... GTGTCAATGGTGGAAACACTAAATAATAAA 16943 47 100.0 30 ............................................... TAACTCCTTTAAATAGGTACAATAGCTTAT 16866 47 100.0 30 ............................................... AATAACTTCATCGAATGTTAATTCTTTAAT 16789 47 100.0 30 ............................................... GAAAAAGATAAGTCGAGCGAACGAAGTAAA 16712 47 100.0 30 ............................................... ATATTTCGCGTTCTATTTTTCCAATGATTT 16635 47 100.0 30 ............................................... CAGGCAATGGTTGCGCTGCAATAGTTGCAA 16558 47 100.0 30 ............................................... GATTTGTTTAGCAGTATATTTCATAATTTC 16481 47 100.0 30 ............................................... CGCATTGACGAAATTCGTATTTATAAAATT 16404 47 100.0 30 ............................................... TCAGGAACAGGAGGTTTAACTATTGCAAAA 16327 47 100.0 30 ............................................... TTTGTTTGGCGTTATTTATTTTGTTGGAAT 16250 47 100.0 30 ............................................... ATTGTGTATGCTTTATGTCTACTTTTGTTA 16173 47 100.0 30 ............................................... GGTGTATTGCAACAAAAACAATCAGGAGCT 16096 47 100.0 30 ............................................... AGAAAATAATAACTTAAAAAATCATTATTT 16019 47 100.0 30 ............................................... TAATTTAAATGATTTTTTATATCATTTATA 15942 47 100.0 30 ............................................... AACTTTGTCAGAAGTTTTAGAAGTTGTATT 15865 47 100.0 30 ............................................... CTCTTTCTTCATCACCTTCTTTTGCAATTA 15788 47 100.0 30 ............................................... AAAAAGAAAACAAAATCTTTATTTCCAAAT 15711 47 100.0 30 ............................................... CTTTGTAGACATCAGCAATAGTTGTTGCAA 15634 47 100.0 30 ............................................... TCTTTTTTATTGATCTTATAACAGTAACCA 15557 47 100.0 30 ............................................... TATAGGTTGATAATTATAATTTTTAGTTAC 15480 47 100.0 30 ............................................... GAAAAATAAAACCTAACTTAGTCCAATAAG 15403 47 100.0 30 ............................................... TGCGTTAGGAAACAAACTTTCTTTTGCTTT 15326 47 100.0 30 ............................................... AAGAATTAATAAAAGAAGGTTATAAACCAA 15249 47 100.0 30 ............................................... GTCGACAAGAGTTGCTTAAACGTTACGAAA 15172 47 100.0 30 ............................................... TGACCCAGAATCTATACCGATTGTTGATTT 15095 47 100.0 30 ............................................... AGACTGTTAAGAGGTAATCAATTCTATGGT 15018 47 100.0 30 ............................................... GTTGGTAAATCGTATTGTTTCATATTATTT 14941 47 100.0 30 ............................................... CGACAAGCATAGCACAATAAATCGTTTCTA 14864 47 100.0 30 ............................................... TAAAATAAGTTTTATATCTGAAAACACAAT 14787 47 100.0 30 ............................................... GCAAGTGCATTAACTGATTTTTTCCATAAG 14710 47 100.0 30 ............................................... TTCTTACATATTTATCTGTTCTTGTGTTAT 14633 47 100.0 30 ............................................... GAAATAGTATTTGTAACCTCTTGAAATAAT 14556 47 100.0 30 ............................................... AACCACCTCACTCTAAATTTTTTGAAGAAG 14479 47 100.0 30 ............................................... TAACTGTATTATCATTAGTTGATAGTGAAG 14402 47 100.0 30 ............................................... TGAAGTTCCATTGTTGTAAAATTTCCTAAA 14325 47 100.0 30 ............................................... TTAGTCGCATCGATTTTACCAGCCTTTACA 14248 47 100.0 30 ............................................... ATATTAACGTACTTCATAAATTTAGACTTA 14171 47 100.0 30 ............................................... GTCTTCTAATGATTTTGTAAACTGGTGCAA 14094 47 100.0 16 ............................................... AACACTTCTTTTTCTT Deletion [14032] 14031 47 95.7 30 .........CG.................................... AGATTTTAGTTGGTTGAATACTTGTGCTGC A,CC [14025,14027] 13951 47 100.0 30 ............................................... TCAATTTCTTTTATTAAAGATAATCTTTCG 13874 47 100.0 30 ............................................... TCCAGCCATTGCAAAGTCAATTCTTTCTAC 13797 47 100.0 30 ............................................... CATAAGCGTTACTTTTCATTGCTAAGCTTA 13720 47 100.0 30 ............................................... TAGTTAATCCATGCTGGTTGTTTTCCTGCG 13643 47 100.0 30 ............................................... TACTTGATATATAAGTATAGATGCGTACCG 13566 47 100.0 30 ............................................... TTCTTGGCATATTTGTTTGTCTTTGCTTGT 13489 47 100.0 30 ............................................... GTAGGGTTCTTGAACCTGTGAGCCAAATAT 13412 47 100.0 30 ............................................... AGAAATAGACGGTTTAATTAAGCCATCTGA 13335 47 100.0 30 ............................................... AAAAAGCGACTTGTTCAGGTAATCTAAGAG 13258 47 100.0 30 ............................................... ACGAAACTGAAGACGTAATGGAATTTGTAT 13181 47 100.0 30 ............................................... GTAATAGATAATTTTATTTCACTTAATGTT 13104 47 100.0 30 ............................................... CTATCGTTGCTAAGTCTGTCATCAATTGAT 13027 47 100.0 30 ............................................... TTTGAAAATATAACGTTCGCTAACTCAGCA 12950 47 100.0 30 ............................................... TATTCAAGGCGACCGATTGATTGAGCAAAA 12873 47 100.0 30 ............................................... TTTCGATCGGATATTTCTTTATCCAAAGAT 12796 47 100.0 30 ............................................... GCCAAAACAATGGAGGATTCTTTTTCGAGA 12719 47 100.0 30 ............................................... TGCATCTCTTCTTGTATATGCGAATATGTT 12642 47 100.0 30 ............................................... TAGTAACCTCGTTTTAATTTTTGTATATGA 12565 47 100.0 30 ............................................... TTAGTAAGGTATTTAATTTTATACTGGTCA 12488 47 100.0 30 ............................................... GAACATCAACCAGTTCTGAGAACTCCTTGA 12411 47 100.0 30 ............................................... GCATCTTGCCATGTTTTTATTTTCTTTAAT 12334 47 100.0 30 ............................................... AGGCGACTTGCACACGTAATTTGAACCAAC 12257 47 100.0 30 ............................................... TGGAATAAAGTATCTAACTTTAAAAATTTG 12180 47 100.0 30 ............................................... ACTCAATATCAGGACATTTAACAAACGTTT 12103 47 100.0 30 ............................................... AATAAGAGGGAAATACGCACCTAAAGTAAA 12026 47 100.0 30 ............................................... TAAATACTCGTTAAAAAGTTTTTTTATGGT 11949 47 100.0 30 ............................................... CCTTCGACCGTGAAATCGTAGTTAAACCAA 11872 47 100.0 30 ............................................... CTGGGCTTGGATTACTATCTAACAATAAAT 11795 47 100.0 30 ............................................... TTAGTTATGGTAATTGGACTAAAGGCTATG 11718 47 100.0 30 ............................................... TATTTGTCAATATCATTAGAAAATTTATAC 11641 47 100.0 30 ............................................... ATCGGAAGCGTTAACGTTAACATACTTGTT 11564 47 100.0 30 ............................................... TAACCGCTTCCGTAGGTGTAAAATATTCCT 11487 47 83.0 30 .......C.....ACG....AT...T...A................. ACAATGACGCAAGGCCGATTATATACTCAA G [11457] 11409 47 83.0 30 .......C.....ACG....AT...T...A................. CCAGGGGCTGATGGTAGTTCTTTGTTTACT G [11379] 11331 47 74.5 0 .......C.....ACG....AT...T...A...........T.AT.G | G [11297] ========== ====== ====== ====== =============================================== ============================== ================== 97 47 99.3 30 GTTGTAATTACTTTGATAAATATACCAAATTGAAAGGAACTCACAAC # Left flank : CGTTGTATAAGTGTATGACAGGGGAGCAGCGTATGATTCGTTTTCCTGAAATGGTATGAGTTTTAGTCGTTATAATGCATATCGAATTATGTGGGTTTTAGTTTTATTCGATTTACCAACCGAAACAAAGAAACAACGAAGTCAGGCAACAAGATTTCGAAAAGAATTGCTTGACGATGGTTTTGCAATGTTTCAGTTTTCGATTTATTTGCGGCATTGCCCAAGTAAAGAGAATGCTGAGGTACATATAAAACGCGTCAAATCTAAATTACCTGAATATGGGAAAGTAGGAATTATTTGTATTACCGATAAACAATTTGGACAAATGGAGATCTTCTTTTCAAAAAAAGAAACTAATTTACCCACAGGACCCCAACAATTAGAATTGTTTTAGAAATAAAAAAACCGATAGAATAATATGTATTCTATCGGTTTTTACTTTTTTTCTCATTTCTACTTTTCTTCTCAAACCCTTTAAAACAAAGGATAATAAAAATGAG # Right flank : TTTTTAATAATAAATTCCACGAAAAAGGCTCTTATTCAAGAGCTTTTTTGTTAAAGAAATGTTTTGGGTAAAAGTACTTTTTACCGAGCTTAAAACAAGGAATCGTCTTGTTTCTCCTCATGCGATACAACGTTTTGTCACTAACGTTAAGTAGCCTTTGCACATCTGCACTGTCGTAGAATCCGTGATCTTTGTCCGTGGGTTGTATATTCGTAATTAATTCTACTAAAAGAAGTTTTAACTCGTTGCTATCCTTCTCTTTTTGTGTAAAAAAGTAAGTGTTTTGCATACGTTTTAATTTACTTAATTTCAGTAAGATACATATTTTAATTAAATAAAACAAATCATAAGAGGAAGTAGGGATAGGGAGGGGGTGTTAATTTTTTTTATTGATTTTCTGTTTTAATTATTCGAATTTCTTTTTTTAATGTCACTTTTTTTCGTCAAAAAAACTAACGAAAAAAGACTTGGCTGTAAACCTCCCTACTAAAAATGTTCTC # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTAATTACTTTGATAAATATACCAAATTGAAAGGAACTCACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.34%AT] # Reference repeat match prediction: F [matched GTTGTGAGTTCCTTTCAATTTGGTATATTTATCAAAGTAATTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,0.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [15-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [4.87,4.91 Confidence: LOW] # Array family : II-C [Matched known repeat from this family], //