Array 1 1-1463 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFQ01000409.1 Acinetobacter baumannii strain ABBL067e contig-8000037, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 1 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 61 28 100.0 32 ............................ AATGTACTTTAATTTCCACTCGACACCAGTTC 121 28 100.0 32 ............................ CATGACCGAAACAGCCAAAAAGGTTTTATGTA 181 28 100.0 32 ............................ TAAAGGATAGTTAGCTGTAGGCCCTGCGGTTT 241 28 100.0 32 ............................ TTATAGTTATGTGTGTGATATCGTTAAGCTGC 301 28 100.0 32 ............................ TAGCACAATCCAAACCTCAATAAAAAGTAAGA 361 28 100.0 32 ............................ GAGCCAATAAGATCGCGAAGTATGCGGAAATC 421 28 100.0 32 ............................ ACAGAGAAAACCCCACATGTTCGAGGGACTGC 481 28 100.0 32 ............................ ATAATTCCGCCATCCTCGGCTGAGATATGGGT 541 28 100.0 32 ............................ TGCCGGAGCGGTCTTGTCATTGGCGAACCCGC 601 28 100.0 32 ............................ TATGCGATTTGATAATTAAATTGCGATACTGG 661 28 100.0 32 ............................ GAAATAAAAAACACCTGATGAAAACAGTTCAC 721 28 100.0 32 ............................ ATAATCACGAATATCACCAGTAAACCAGTGAT 781 28 100.0 32 ............................ TTATTGGTCCTGGTCAGTGGAATGGTGATTCT 841 28 100.0 32 ............................ TGGGTAAAAGCCGATGGATTAATCATCTTTTG 901 28 100.0 32 ............................ ATTAACAAGAGTGGAATTTATTGAACTATTAA 961 28 100.0 32 ............................ TCTGGGTTCTTTTCGCGTGTATGGGATACTTG 1021 28 100.0 32 ............................ TGTAAAGTCATTCGTAATAACCGTTATACGGC 1081 28 100.0 32 ............................ AAAACCAATCAAATAACGGTTATGTGGCCACA 1141 28 100.0 32 ............................ CATAGCGACATATAGTTTTGCCCGGATCTGAT 1201 28 96.4 32 ..................A......... TGTTTCGCGTTGAGGTCCGGGTAATCGCCTAT 1261 28 78.6 27 ....C.....CTCC..........T... GTCTTGTATCCTGATTTCAAAGATTCA 1316 28 92.9 32 ....C....T.................. ATATCACGCGCCATTGCAAGTTTTCTACCGAT 1376 28 89.3 33 ...A........CC.............. TGATCTTTAAGATTAAGCATCCGTTCTGTTTTT 1437 27 85.7 0 ...TG.......C...........-... | ========== ====== ====== ====== ============================ ================================= ================== 25 28 97.7 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : | # Right flank : AGAGTTTCTTTCAAAATTTAAGACGACGTATTTTGTCGTTAAAAGGTTGTATTAAGCTGATAAAAACTTTCTCTTTTTAAAACAAAAGATTATATTTTTATGATATTTAAACTTTAACAATAAACTATGCATGTCATTTTCATCTCGGCTTGTGAAAAAAGAGCTTTAAAGAAAACTCGAGCAATTTTGGATAGCTATGCTATTCGTACAGGACATTCGTCTTGGCAAGCACCAATGACAATGGACGGCTTAAAAGAAATTCGTAGTGCATTAAAAAAAGTAGCTACCCGACAAACTGCGGTGGCCGCTTACATTAATTTTGGTGTACGCAGAATGAAGCTTGCATGGGTTGTGGGAGCAAAACATAAATTTGCACACGATGGTGCATACCCAGTTGCATCGACTAAGAAACAGCAAAAGTTACTCATGCTTGATGAGTGGGTCAAAGTAAGTAGCTTGTTGGCAGGTGCAGCAGGAGACATGCATGATATTGGTAAGGC # Questionable array : NO Score: 6.15 # Score Detail : 1:0, 2:3, 3:0, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-16] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [0.0-0.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.28,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 1 26279-22769 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFQ01000328.1 Acinetobacter baumannii strain ABBL067e contig-5000058, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 26278 28 100.0 32 ............................ TTATTGTGAGCACCTTGATTGCTGTGCGCTGC 26218 28 100.0 32 ............................ TACAGCGGGAAACTTGAAAGTCATTGCGAAAT 26158 28 100.0 32 ............................ TGATTGCCCCCTGAGGAAACTGTATAAAGTCC 26098 28 100.0 32 ............................ AAACACCAACTAAGCCATTCCCTATTCAAAAA 26038 28 100.0 32 ............................ ATGAACTTTTAATGGATGCATGCGCCGCCCAC 25978 28 100.0 32 ............................ ACGAACAACGATAATTTGGAATACACGCTCAT 25918 28 100.0 32 ............................ TCAGGAGAAAGATCGTTCAAAAGCTCAAAACC 25858 28 100.0 32 ............................ TGAAAGTTTTGATATCCACTCTGCTGTTTCAA 25798 28 100.0 32 ............................ AGATGGTAAGAAAATTATTGAGTCTGGAGACA 25738 28 100.0 32 ............................ CGACAGTCCAGTTGATCAGATCTTGATTAGAC 25678 28 100.0 32 ............................ AATGACATGGTTCAACAATTAAATTCATCTCA 25618 28 100.0 32 ............................ GTTCTTTTCTGCAATATGTGCCATTAGGTATT 25558 28 100.0 32 ............................ ATTTTAGATGAAACAAAAGATAGCAGGATTAT 25498 28 100.0 32 ............................ AGACCAAGCGGATTGACCGTATTGATAAATAA 25438 28 100.0 32 ............................ TTCTGCAATACAAATCACTGGATCAGCCAGGT 25378 28 100.0 32 ............................ TGAGTCTTTGATTTCCCAAATATTACTTGAAA 25318 28 100.0 34 ............................ CCTGAAAAATTTCACTGTGTCCATTTCGTTATTA 25256 28 100.0 32 ............................ TATGTCTTTAAATTCTGAAAAAACACTTGTTC 25196 28 100.0 32 ............................ GAAAAAATTGAAAACTTTTTAGAAGTAAATGA 25136 28 100.0 32 ............................ GCCACACATGCCTAAAAACGCAAGTGCGCTCG 25076 28 100.0 32 ............................ ATTATCAGATAAGCCTTTTATGAATGATCGTT 25016 28 100.0 32 ............................ ATTAGCTATTAGCTTTTTGGCAACAACAACAG 24956 28 100.0 32 ............................ AGTTCATGAAAACAGCTTTAAAAAGAAAGCAC 24896 28 100.0 32 ............................ TCCGAAGGTAGTGAAGCTGTGTGTGAATTTAC 24836 28 100.0 32 ............................ TTGCAAGCTCGTCTAGCTAAAGTAGACCCTAA 24776 28 100.0 32 ............................ TGGTACGACAACTACGAAAAGCTGAGCAAAGT 24716 28 100.0 32 ............................ TCAACTTAAATGGATGCTCCCCGCGGTGAATT 24656 28 100.0 32 ............................ TTGATTGCTAGACGGATTTTTAGGCAGATCAT 24596 28 100.0 32 ............................ GAGTTTAATGCGCTATATGGCGACGAGGATTT 24536 28 100.0 32 ............................ CATGCAATCGCGTTGATTACCGCAGCTTCGAA 24476 28 100.0 32 ............................ ATGAGCCGCAACCATACGGTCTATGACTTCCA 24416 28 100.0 32 ............................ ATAGCGCCCTGCTCTATGTTGTCACTTCCGAA 24356 28 100.0 32 ............................ TCCAAGTGAATCGGCTCCTAATGCAAATGACC 24296 28 100.0 32 ............................ TGAAAACCAATATGCTGCCTAATTGCCATAAG 24236 28 96.4 32 ....A....................... GATCTGCGTCCATTTGTACTTGCTGCGGGTGC 24176 28 89.3 32 ....T.......AT.............. ATATACAGCACCGCTTAGTGCGACGCGGTCAT 24116 28 89.3 32 ....T.......AT.............. GCCCACAGGTTGAGCATCAACGGCCATCGAGA 24056 28 89.3 32 ....T.......AT.............. ATCATAGAGCTCACTTTGTCGTTGAGCCTGCA 23996 28 89.3 32 ....T.......AT.............. AGAAGGCCCGTAATTTAACTGTAAGCCGTGGT 23936 28 89.3 32 ....T.......AT.............. TCTTCCTGAGTTTTAATCCCATTTGCCTTACA 23876 28 85.7 32 ....T.T.....AT.............. CATCTTCGCCAATTGCTTTTGGAGAGTTGCTA 23816 28 89.3 32 ....T.......AT.............. TTCAGGGAATTATCGTGAAACTTTCATTGACT 23756 28 89.3 32 ....T.......AT.............. TGCACCAGCTGCTGGCTGGTTGAAATCTGCAA 23696 28 89.3 32 ....T.......AT.............. AGAAGGTGCAGAGTTTTGGGACTTTGGGTGGT 23636 28 89.3 32 ....T.......AT.............. TGTTTCAAAAGCTACACCATCAAAACCATTGC 23576 28 89.3 32 ....T.......AT.............. TATTTAAGTAATAAGTTTAATAACGACCTAGT 23516 28 89.3 32 ....T.......AT.............. AACACGTTCTCTATATCGCTGTTTGCGGTCAT 23456 28 89.3 32 ....T.......AT.............. TTCAGTTGGATATGCCTTTGATACCAAGAAAC 23396 28 89.3 32 ....T.......AT.............. GCCTGCAGACACGGATTTACGCAGCTGATCGA 23336 28 85.7 32 ....T.......AT...........C.. TAACCAAACTATGTCATCGATCGGAGATTTCA 23276 28 89.3 32 ....T.......AT.............. CAGTCCCCGCTTTGAAGCATTCCCATCAGTAC 23216 28 89.3 32 ....T.......AT.............. TCACAGCTATCGTCTGGCTGCCGTCGCGTAGA 23156 28 85.7 32 A...T.......AT.............. TTATTATTAAACGGGAAAAGTATATTCTTGCT 23096 28 89.3 32 ....T.......AT.............. ATACTATTATAATGATCTAAACCCATTACAAC 23036 28 89.3 32 ....T.......AT.............. ATCATCAATAAGTTGGCCTTGATTTAAATAGT 22976 28 89.3 32 ....T.......AT.............. AGATACAAACGAGTTCGCATCTCGACCAGAAG 22916 28 89.3 32 ....T.......AT.............. ATTATCCAGATAAAACCATATCTACAAAGTGG 22856 28 89.3 32 ....T.......AT.............. TCAACCTGAACACAGACATACATGTTCTATTG 22796 28 78.6 0 ...GC.......AT..........AT.. | ========== ====== ====== ====== ============================ ================================== ================== 59 28 95.2 32 GTTCGTCATCGCCCAGATGATTTAGAAA # Left flank : ACGTTGGGCCAAAACGCTATACAAACAACTTGCTAAAGGCTTTGGAGTTGAGTTTATTCGTGATGAAGGCAAAAACTCTCATGACTCTATTGCGGATATAGCCAACAGCTACCTTGATCATGGAAACTATATTGCCTATGGCTATGCAGCAGTTGCTTTAAATGGGATGGGAATTAGCTTTGCCCTCCCTATTTTGCACGGTAAAACACGTCGTGGAGGTCTAGTCTTTGACCTAGCTGATCTAGTTAAAGATGCTTTTGTAATGCCACTCGCTTTTACATGTGCAGCAAGAGGATTAAATCAAAAAGAATTCCGAATGCAGCTTATTGAAACATGCCAAGACCAAGATATTTTAGATTACATGTTTAGCTTCATTACTGACATATGTAGTAAAATCAAATAAAATCATACTTTTAACCCAAGTACCTCATAACGAAGTATTTTCACTCATTAAAAACTTATATAATTGATTTTAAGAGTTTTGTTTTAACTTAACTCTA # Right flank : TTTGAATCTTAAAAAGAGAAAACCCCGAAACTTTCGTTTCAGGGCTTTTCACGAATCTTGGTGGAGATGGCGGGAGTTGAACCCGCGTCCGCCAGCACTACGCTCGAGAATACTACATGCTTAGATATCGTCTATTGTTTTAACACCAAGTGACCCGACGAACAGGGTACAAGGTGCGATCCTCTAAGTTTGGTATAAAGCCCCGAGGCTTGACTCTATACGGACTTGTGTGCGTGCGCTTCAGTCGGGTTCCCAGACCACAAGTATTCTAGGAAGCGGACAAGCGGCCCTTAGGCAGCTAGAGCGTAAGTTTCGTCGTTTGCGACTATTTAAATGCAAATTTTATTTACGAGAGAAAATGCGCTCTCGGCATGCATCTATGAGTTTCATCACCGGCGTCGAAGCCAATAACATCCCCATGAATGTCTGCACATCATAGCATAACTAAAATAAAATGCTGTGCATTTTATCAACAGTCTGCCACTGATGAACATACTTAC # Questionable array : NO Score: 5.92 # Score Detail : 1:0, 2:3, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:1, 9:0.90, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCGTCATCGCCCAGATGATTTAGAAA # Alternate repeat : GTTCTTCATCGCATAGATGATTTAGAAA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:57.14%AT] # Reference repeat match prediction: R [matched GTTCGTCATCGCCCAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [18-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [63.3-81.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.55 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 31369-32176 **** Predicted by CRISPRDetect 2.4 *** >NZ_LLFQ01000328.1 Acinetobacter baumannii strain ABBL067e contig-5000058, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 31369 28 100.0 32 ............................ AACTCATACAGCGGGTCCAAGAGCCTATGGTA 31429 28 100.0 32 ............................ AAGACCAGTTTTGAAGGATATTAACTTTTTAT 31489 28 100.0 32 ............................ TCGTGCTTGGGTATCACATATTGATGTGACTT 31549 28 100.0 32 ............................ CACTAATCTCTTTGATTTAATTAAGTTTCAAC 31609 28 100.0 32 ............................ ATCCGCATCATCAAAAATCGCAAGTGGGTTTG 31669 28 100.0 32 ............................ AATAACGACGGTTGCGCTGTTGCACGTTCAGC 31729 28 100.0 32 ............................ TTGATGAGAAACTGTTATTGTGTATGTCTCAC 31789 28 100.0 32 ............................ ACGACAGGTAAATTGGTTGCCATGTGTATTGA 31849 28 100.0 32 ............................ AATTGTAGAAAGCGTATCACTTATTTGCTTAT 31909 28 100.0 32 ............................ ACGGATTACCTACAGGTTTACCAGTTGCATAA 31969 28 100.0 32 ............................ TCTTGAAGGTGAGCCAACAAAAATCCATTTTT 32029 28 100.0 32 ............................ GTTTAAATCCATAAATGAATTTTGCGGTTTTT 32089 28 100.0 32 ............................ AACAATTGCCTGACTGGTATGAAGAACCAGTA 32149 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 14 28 100.0 32 GTTGTTCATCGCATAGATGATTTAGAAA # Left flank : TTTAAAAATAGAAGCCGTTTTACCTGCATTTGCCTGATAATCGGTTGGAATAAGGAAGTCTTCATTTAATAAAGTTCGAGCACTGAGATAGGGTAAATCAAGTGCTTGTTGTTTACTTAAACGAATTCCACCTTTTTCAATATTGGAATTAATCGTCTTTAAACTAAAGTGTACCGATTCTTCTAAAGCGTTTATAAAAATATCAGTTTGTGGTTCAGGCATTATCTTCCCCGTTTTTGTTATCTAGCCAATTTTTAACACATTATTTGAAAAATGAAAGTATTGAAGGTGAGAGCTGCGACAAATTAAGTCGTAAAGACAATTGGATGAAAATATTATATGCTTCATAAATTTAGCCTAAGACGATTAGGTTATATTTTTATAAAATTAGAAAAATTAATATAATTCAATAGATTATATTGTTCTTCTATTTTGAAGGTTTTTAATTCATTAAAACTTTATATTATTGTTTTTAAGAGTTTTGTTTTTACTTAGCTCTA # Right flank : AA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTTCATCGCATAGATGATTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.86%AT] # Reference repeat match prediction: F [matched GTTGTTCATCGCATAGATGATTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.70,-3.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [83.3-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.14,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //