Array 1 5291-6885 **** Predicted by CRISPRDetect 2.4 *** >NZ_JH379465.1 Prevotella stercorea DSM 18206 Scfld1359, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================== ============================================================================================ ================== 5291 30 100.0 35 .............................. TACAACTTCGAAAAAAGTTAGTACCTTTGCAATGT 5356 30 100.0 92 .............................. NNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNTTGATGTAGGAATCAAAAGATATACAACATAAACGTACTTTTCGGCAAATAGCTAAG 5478 30 100.0 36 .............................. TACAACTATTTGGTTTTTAAGCCAAATACCCGGGGC 5544 30 100.0 36 .............................. TACAACACAAAGAAACAAAGAAACAATGTTTCCTTA 5610 30 100.0 35 .............................. TACAACTGGCACTTAGACTACACCAAGTACTTAGG 5675 30 100.0 70 .............................. NNNNNNNNNNGGTTTGATGTAGGAATCAAAAGATATACAACGAAGAGAAGAGAGATACAGAAGAAGAAGA 5775 30 100.0 36 .............................. TACAACGCTGCTTGGAGATACGAGCATCCGACTTCC 5841 30 100.0 35 .............................. TACAACAAATCCGCTTCTGCCTAAGTGCACCAAGT 5906 30 100.0 67 .............................. NNNNNNNNNNTTGATGTAGGAATCAAAAGATATACAACATAATATTTTTTTTATTACGATGCAAAGA 6003 30 100.0 36 .............................. TACAACCTTGGCAGTTATGCAGGCAAGGGAGTAGGT 6069 30 100.0 35 .............................. TACAACTGTTTCCATATTGTATGTGTTTTGAGTGA 6134 30 100.0 36 .............................. TACAACTACTCTGATAAATTCATACGTGCAAGATAA 6200 30 100.0 36 .............................. TACAACTCGACAAACTCAACGTATTTAGAGCCGTCA 6266 30 100.0 36 .............................. TACAACTGAATATCGGCTTTACCATCGGTGTTGTTA 6332 30 96.7 69 .............................N NNNNNNNNNGGTTTGATGTAGGAATCAAAAGATATACAACCATCCAAGCACATACAAGCACGTACAAGA 6431 30 100.0 35 .............................. TACAACCTCACGTATCAACAGAGCATATCGTTTCA 6496 30 100.0 35 .............................. TACAACGTCGGGGGTTTCTATCAGCCCATTTATAA 6561 30 100.0 35 .............................. TACAACTGTTAATATATCATCGCCAGATACCTTGG 6626 30 100.0 70 .............................. NNNNNNNNNNGGTTTGATGTAGGAATCAAAAGATATACAACAGACCACTCATAGGTAATACGTGTAACCT 6726 30 100.0 35 .............................. TACAACCTTATTTCGACCGCTCGGCTTCATGGTTG 6791 30 100.0 35 .............................. TACAACACCTCGAAGTTAAGTCTTTATCTCCCTTG 6856 30 96.7 0 .............................N | ========== ====== ====== ====== ============================== ============================================================================================ ================== 22 30 99.7 45 GTTGTGGTTTGATGTAGGAATCAAAAGATA # Left flank : GTTTTATGCTGGTGAAATTAAGAAAATATCACTTCCCTTTATCTTATGACGGAATACAGACTTAATGCATATCATATTATGTGGCTATTTGTGTTTTTCGATTTGCCGGTTTCTACCAAAAAAGAAATGAAAGCAGCTGCACTTTTCCGTAAGAATTTGGAAAAGGACGGCTTTTCCATGATGCAGTTTTCTGTTTATATACGGCATTGTGCATCAAGAGAAAGTTTGGATGTGCATGTGAGAAGAGTGAAGGCATTATTGCCAGAAACGGGAAAGGTTAGCATACTAAGTGTTACTGATAAGCAATATGGGGACATCTATAATTTTTGGGGTAAACCAAAGAGCATTAAAAAGAGTAAAATCACTCAGAAAATTTTAGGTGCCCCAATTCAATTGGAATTTTTTTAGTACTTTTGTAGCGTAATAATTCTTACACGACGATTTCTTATAACAAAGCAAGAACTATAAAATATTGGTTCTCTGACATTTAATAGTTATAG # Right flank : NNNNNNNNNNGTTTGATGTAGGAATCAAAAGATATACAACCTATTTCAGTGTACTCACCGAGCGCAAGGGTTGTGGTTTGATGTAGGATTCAAAAGACATACAACTTTTGTGGCTAATCTTGTTTGTATATTATAAATTTGTGCTAACTTTGATGGAAAATACAAATGTTGATGAAGAAATAATATTGTTTTATATGGAGCTGCGTTATAATGGTGCAACTCTTTTAATATTATGAATGATATGGATACATACCACTTGTCGCGATTTCTTGCAGCTCAGGATTCTTACTCACAATATAAGACGGCTCTTGAGGAGATTCAAAACGGGCGAAAAAGGAGCCATTGGATGTGGTTCGTTTTTCCTCAATTGAAGTGGCTGGGGCACAGTTATAATGCTGACTATTATGGTATTGCTGGTGCTGATGAGGCTCGTGCTTATTGGCTGCACCCCGTGCTCAGAGACAGATTGCAGGAGATAACGGAGGCTCTGCTTCTGTTGG # Questionable array : NO Score: 5.61 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:-0.63, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTGTGGTTTGATGTAGGAATCAAAAGATA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:66.67%AT] # Reference repeat match prediction: F [matched GTTGTGGTTTGATGTAGGAATCAAAAGATA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-3.60,-2.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : II-C [Matched known repeat from this family], //