Array 1 437-1 **** Predicted by CRISPRDetect 2.4 *** >NZ_WUFC01000123.1 Rhizobium leguminosarum strain JHI985 JHI985_NODE_123_length_458_cov_1.45921, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 436 32 100.0 36 ................................ GGCGCACTGGGCGCGGCGTCCGCGGCCGTGGCCAGC 368 32 100.0 35 ................................ TCGTGCAGGGCGGAGGCGCGATCGCGTGGACGCCG 301 32 100.0 35 ................................ ACAGCTGCCCCGCCGTGATGAAGAGCTCATCGAGC 234 32 100.0 36 ................................ GCTCGCGAGCGCAACGAGGCGATCACCGCGCTCGGC 166 32 100.0 36 ................................ GAGGCGTGGCGTCCAGCCGATCATGACCGCCACGCC 98 32 100.0 34 ................................ TCCGTCACCGTCGCCATCCAGTGGTGCCGGCCCT 32 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 7 32 100.0 36 GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC # Left flank : CCTGATGCCCGCGCGTCGAAA # Right flank : C # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCGCCCCGCGTGGGCGCGTGGGTTGAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-10.90,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [0.0-11.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.14 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //