Array 1 66440-65940 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP040856.1 Lactobacillus johnsonii strain G2A plasmid unnamed2, complete sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 66439 36 100.0 30 .................................... TATTCTTTATCAAATGAACTCATTGCCCAA 66373 36 100.0 30 .................................... AGTTGATATTATTAAATCGGTCGAGATGTG 66307 36 100.0 30 .................................... AAGTAATTTAATAACTAAGTTATAGGTCAT 66241 36 97.2 30 ..............C..................... AATCTATCCTTGTCTTTTTCGTTAAGCCCT 66175 36 100.0 30 .................................... ATGAAATGTCAGAGGACAATTACAATTTTC 66109 36 100.0 30 .................................... TCTTTCGCCAAGTAAGATAGCATATATACA 66043 36 100.0 30 .................................... TAATTAAAATTATTTGATTTTCTCAATAAT TA [66015] 65975 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 8 36 99.7 30 GTTTTAGATATAAGTCATTTTAAGTACATAGAACCC # Left flank : GTATTTCAGATAAAATAATAGTTATTAAAAATTTACTTATTGCTTGTCACGCTAATGCTTCTGCTGGATATATGAAACAAATTAATGTTAATAATACAAATATAAATACTATCGTTACCCTTACTGATAGCGCTGAATTAATCTATCAATCTCCGACTGGAATGCATGAAGTGAAGAGAAAAATATCTGATTTATTTTAAATAGAGCAAAAATACCAGGAGCCTGTGCTTCTGGTATTTTTATTGCTAATTTAATTAAATATGATAGAATAAAACCATAGGGAGTAGCTCTCCTTATATATGGAATTGCTATTAATGTTGGGTCGCTCCCATGTTAAATAGCAATTTTAGGGTTCGTATACTTGAAATGATTTATATACTGCTTACTTTTTTTGATAAGCTACGTTAAAATAAATTATTATATGTAATCATTGCTCGAGCTATCTCGAGCTTTTTTTGTAGAGAAGAAGCACTCTATTAAAAAAGTATGATAACAGATCG # Right flank : TGTACAAGACTATTTTACAAATGCACCAAAGTTTTAGATGTAGGCTATTTCAAAAGATAGTCACCTTTTATATGCAACAATATAGTCTAGAAAAAATGGCTGTTTGTCAAATCCTGTTGATGAATAGTTTTGAAAAAGAATCAAGCAACTAAAGAATAGTTGTTTGGTTCTTTTTGTTTGATGATATTTTCTTCTAGCCTGATTCTAATTAATAAATGTCTAAAATTACTGTATCCGTAAGCAGTTCGTTCAATTTGCTTAATCTTGCGATTGACACCTTCAAGACAGCCGTTGGAGTAGCTGGAGGAGATACCATTTAGAATGCCAGTATAATTGTGCTTAAAGGTTAGTAATGTTTGATGCATTTGCTTGCCTACAGCTTGTTTTGAGTGAAGCAGATGAATAATCTGCTTTTCATCTTTGTTTTTGATAGCAGTCCTAAAGTCCTGCATAACCCAATATGTGTTTTCGAGATCTTTATTACAGTCTAGGCCGTCTAA # Questionable array : NO Score: 3.25 # Score Detail : 1:0, 2:0, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGATATAAGTCATTTTAAGTACATAGAACCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:72.22%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [0.00,-0.20] Score: 0/0.37 # Array degeneracy analysis prediction: R [4-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-68.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,0.41 Confidence: MEDIUM] # Array family : NA //