Array 1 16898-9122 **** Predicted by CRISPRDetect 2.4 *** >NZ_BKYB01000040.1 Acinetobacter junii strain TUM15553 sequence040, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 16897 28 100.0 32 ............................ ACAGGTGTTAATTGTTTAATATCCATCACGCC 16837 28 100.0 32 ............................ ATTCTTCCAAAGTTATTGCATCCGCAATGCAT 16777 28 100.0 32 ............................ CATCCAATAACACTAGCTGGTAGTTGTGTTGA 16717 28 100.0 32 ............................ ATGAGGGGCAATTGGTTCCCATTTAGACATAT 16657 28 100.0 33 ............................ TATCGAATTAACGAATGACTGGGATGATCGAGA 16596 28 100.0 32 ............................ CCTGTTATTGGGAATAAGAACGTAAATGACGT 16536 28 100.0 32 ............................ TGCTTGATTTCTTCTTCTGTGCGCCATGCTCC 16476 28 100.0 32 ............................ CTTGCCCACCAGAGCTTTTAAAAGATTGGGAT 16416 28 100.0 32 ............................ ACATATCCAATCGGATCACCACTTGGCTTGAC 16356 28 100.0 32 ............................ TTGTGCTAAATCGACAAAGTTTTTAAATGACC 16296 28 100.0 32 ............................ AAAAGTTAGAATCTCATCGTCTGCGTAAATAT 16236 28 100.0 32 ............................ GTACAGGCTCACAGTGACACTACAAACAAACT 16176 28 100.0 32 ............................ AGAAAGTGACCGTTTCTACGTTGAAGTCGCTT 16116 28 100.0 32 ............................ AACATTCAACTGTTCCAATGCTGCATTAAACT 16056 28 100.0 32 ............................ TGTGAATGAGCGAAAGCCGTATAAATCCTCTT 15996 28 100.0 32 ............................ CCACCAACGTGTTCGCCCTTGTTCTCGTTCTG 15936 28 100.0 32 ............................ TAGTATAGATAAACCATCTCCCGCATTTTCAA 15876 28 100.0 32 ............................ ACGCACTTACCGTTACAAAACATTCCGTTCTT 15816 28 100.0 32 ............................ TCATAAACAGGAGTAGCAGCAATACGTGAAAA 15756 28 100.0 32 ............................ AAGTAGAGGATTAGCTGAAACTAATTGACCCT 15696 28 100.0 32 ............................ ATTGTTTAGATACTGCTTTAAGAAAATCTCGT 15636 28 100.0 32 ............................ GTAAACATACCCACCACCACCTAGTATAGATA 15576 28 100.0 32 ............................ AGCAAAGGATGGTTATGACAGTCGATACGAAA 15516 28 100.0 32 ............................ TGTTCTTGTGTAAGCTTGCCTCCAGCAATAAC 15456 28 100.0 32 ............................ AGATGGCAACGGTGTTGGTCACAACTGGAAGG 15396 28 100.0 32 ............................ AATCCAAGCCACATCAAATGCTGTTCGTTCTG 15336 28 100.0 32 ............................ TCAACCGACCGCTCTGTCTCCCTTGCAGCCTT 15276 28 100.0 33 ............................ TGTTCAACCTTTGTGATAGCGGATGCGCACTGA 15215 28 100.0 32 ............................ TGCACGAGGTGCCTACTAACCATCATATAACC 15155 28 100.0 32 ............................ AGTGGTTGGGGCGATATTTGCACTGACTTTAT 15095 28 100.0 32 ............................ TTAACCTTGCGACCAGAGTTGTATGTTGTTTC 15035 28 100.0 32 ............................ ACCATTGACTGCAATAAGGCTTAATACATCAT 14975 28 100.0 33 ............................ GCTTGGATCGCTTGTGTAGTGCTTTGGATGGTT 14914 28 100.0 32 ............................ TGCTTGTATTGCTGCACCTTGAGCAATTGGAT 14854 28 100.0 32 ............................ TATCAAAGACTGCTTGCGACTACCACAAGCAC 14794 28 100.0 32 ............................ GATGTTGTAAGCTAGTGATACGAGCGCATCAA 14734 28 100.0 32 ............................ ATGACAAGGCGCGGGTTCATAAAGCGAGTTGT 14674 28 100.0 32 ............................ AGGTATAAAGCTGAAATTTCAGACTATGGCAG 14614 28 100.0 32 ............................ CTCATAAATAGTCCAAACACCATCATGTGTGA 14554 28 100.0 32 ............................ ATTTTGAAATCTCACTGATATATTAAAGCCAC 14494 28 100.0 32 ............................ AATTGCTTCACCTTTGTTTTCAACTGTCCAGT 14434 28 100.0 32 ............................ GAGCTGTAGTTGCCTTTCAACACATCATTCAA 14374 28 100.0 32 ............................ AAAGGGAAAGATTGTCTTTCAGTTGCGCTATA 14314 28 100.0 32 ............................ TTACGATACTTACTCGCCATAGCCATGTTTAA 14254 28 100.0 32 ............................ AGTGACAGAAGTTCCGCCACGTGCATAAGAGT 14194 28 100.0 32 ............................ CAAACGCAAAAGACTTTGTGATTGTTTATAGA 14134 28 100.0 32 ............................ GCCATAAAGGCTGACTGAAACGCTGAATAAAA 14074 28 100.0 32 ............................ GTGAATGGAAATGTTAAAGAATCAGGGATATT 14014 28 100.0 32 ............................ TTGCCACTTATGATTGCAACAAATGCCGCTTT 13954 28 100.0 32 ............................ GCTTTAGGTAGTCGCTTACGTGGTGACAATGG 13894 28 100.0 32 ............................ TGGTTGCAAACCCACTTGCTCAGGCTGCCTGT 13834 28 100.0 33 ............................ AGCTTCAGATCGCACGCAAAGCGGACGGAATTT 13773 28 100.0 32 ............................ TCACTTTGTGCAAAGGCTTGAACATCATTGAC 13713 28 100.0 32 ............................ GCTGATCCAGCTTGAGTTGTTGCAGTTTCAGC 13653 28 100.0 32 ............................ ACCATCGTTACCGATTAAGTCAGATTCTGACC 13593 28 100.0 32 ............................ TTTCCTCAAAATCAACAAATGACCACTGCATT 13533 28 100.0 32 ............................ AATTGCAGTAGCTGAATACGATATTTTGTTGC 13473 28 100.0 32 ............................ TGATGGAGCAACACATTTTGTACGGTCAACTT 13413 28 100.0 32 ............................ TAACTACTTCAACACCTTTAATTCTCCGCTTA 13353 28 100.0 32 ............................ TGCCAATCAGTTTGTCGATTGATCAGCAACTT 13293 28 100.0 32 ............................ GCCCCTTGCTGCTTCTAGCATTGCTTTACAAT 13233 28 100.0 32 ............................ GATGTTGTAAGCAAGGGAAACCAAAGCATCAA 13173 28 100.0 32 ............................ ATTAGTAGCTGACACATAAACAACACTTTTAT 13113 28 100.0 32 ............................ GTAGCCTTGGATCGACAATTCATTTGAGTTTC 13053 28 100.0 32 ............................ AGCAATATTAGCTTTCATTGCGCGGCTCACTT 12993 28 100.0 32 ............................ AATACCTGGTGAGATTGATACAAGCGGATACC 12933 28 100.0 32 ............................ GTTAAATATACCGCTATTTTTACGGTACAAGA 12873 28 100.0 32 ............................ AGAGCGTTGTGCCAACTGAATGTAGCCTTTGT 12813 28 100.0 32 ............................ ATGATCTAAAGCGATTTGAATCTTCGGTGAAT 12753 28 100.0 32 ............................ GTACAAACTTACTGTGACACTACAAACAAACT 12693 28 100.0 32 ............................ TCACCCTCTCATCAAACTTCTTGCAATTCGGA 12633 28 100.0 32 ............................ TTTGCGTTGTGATAATGAGCGTGTTGTAAGCC 12573 28 100.0 32 ............................ TCTCAAAATAAAAGACTACTGGTTTTTGGATA 12513 28 100.0 32 ............................ ATGTTGTTTGTTTGACGCATTCACAAACTCAA 12453 28 100.0 32 ............................ GAACAGGCGTATGCCAAACGCCTAGACCTTCT 12393 28 100.0 32 ............................ TTGCACAGCTTTTGGCTGATCAGGCGGTGTTT 12333 28 100.0 32 ............................ TGGGGATGAAGTCACATTGAAAGGAAGAATGG 12273 28 100.0 33 ............................ ATCCTCATCCCACTCAGCTAAACTACATTCTCT 12212 28 100.0 32 ............................ TGTGCTTGTTGATACTCGTCTGTAGCTACAGC 12152 28 100.0 32 ............................ AACAGAAGATAAGACATTTCAACATGCGTTAT 12092 28 100.0 32 ............................ ATTGGAGGAACTGAGGTTGCTGGAGAACTGGA 12032 28 100.0 32 ............................ TCTACATATGAGAAATCATCTTTAAATTTTTC 11972 28 100.0 32 ............................ TTACGCAATGATTTAATGGTTTTTTGCATGTA 11912 28 100.0 32 ............................ ACCACACCGCTGTTTAAAGCTGCTGACTCATT 11852 28 100.0 32 ............................ TGACGTAAGAAGATTTTCCAGTCAGCGTTCGT 11792 28 100.0 32 ............................ CTTGTCATGAGATTTTTGCAATTGCTGTTCTA 11732 28 100.0 32 ............................ ATAAGGGAGCAAAGGTCGAAAAAGGAAATTAT 11672 28 100.0 32 ............................ TGACCACCATATTCAACCTTATTTTTACGCTG 11612 28 100.0 32 ............................ GCACAGGTATTATTGGGAGACCATTTACCATG 11552 28 100.0 32 ............................ TGTCGGGCAACATCATGCTTCCCTTTATGCTT 11492 28 100.0 32 ............................ ATTAGTTATGTACGAAGTAGACACACCAAAAT 11432 28 100.0 32 ............................ AGTTGGTAGTTGTGATTTTCAATTTTTTTACT 11372 28 100.0 32 ............................ AAAGAAATTTATGCTTTCCCTGATAAAAATAA 11312 28 100.0 32 ............................ GTTCATATTTGGGGCACAAAACAAAACGGTGG 11252 28 100.0 33 ............................ CAAGCAAGGAACAAGAAAAAGAACTGATCAATT 11191 28 100.0 32 ............................ AGTCTTCGCTAAATACTAAACCACCTCTAACA 11131 28 100.0 32 ............................ ATGTAATATCGGCAGCTTTTTTAATGGTTTCA 11071 28 100.0 32 ............................ GGTTGAAATTGATAGCTTTAATACAACAACAT 11011 28 100.0 33 ............................ TCAATACATCTTTACCGATGAAGTAGTTAATAA 10950 28 100.0 32 ............................ GTAATCAATATTTCCGAGAGCGAGTATCTGTA 10890 28 100.0 32 ............................ AATGTTCCCAATTAGATACATTAACTAATCAA 10830 28 100.0 32 ............................ ATTCAAAGTTAGGACGACCAGTGATGGGAGCG 10770 28 96.4 32 ........T................... TGATTGTTTGGCAATACATGACCTAGCATAAT 10710 28 100.0 32 ............................ AGCGAATGTCAAAATTAACGATGAATATTATC 10650 28 100.0 32 ............................ ATGCTGGGGCGCAAAGCCAAATTTTGGAAATA 10590 28 100.0 32 ............................ CAGTAGCAGCCGTATTTCTTGACACCATTATT 10530 28 100.0 32 ............................ TTTCCACTTTAGGATTCTTGTTGTAATGTCAA 10470 28 100.0 32 ............................ TAAAAAGTTTTGCATATCGAATTGAGGCTTAG 10410 28 100.0 32 ............................ GCCACGGGGTCGAACGGCAAAGGGTCTGCTAA 10350 28 100.0 32 ............................ ACGTGAAAACATTAATTGCCTAGCACCCTTGA 10290 28 100.0 32 ............................ GCGACGGTCGCTTGATCAATTTTCGCCGCAGT 10230 28 100.0 32 ............................ CCCGAGGATTGGAGCATTGACGCGGTCGAGGA 10170 28 100.0 32 ............................ TCACTTCATTGGCGGTAGTGGCGCCTCGTCCG 10110 28 100.0 32 ............................ TCGCGCTTGGGTGTCAGCGCTCTAAATGAATA 10050 28 100.0 32 ............................ AACTTATTCGCTATCAACGTGAAAATCCTACT 9990 28 100.0 32 ............................ TGACGCAATAGCGTGGGCGATAATGACGAGCA 9930 28 100.0 32 ............................ TTAGTCAATCTGTAAGCAATCAACTGGCTTTA 9870 28 100.0 32 ............................ AGTTACCAAAAATTAAAAAGGTGCCAGCATGA 9810 28 100.0 32 ............................ ATAAGAAACCTGACAGCTATTGCATTTTGGGC 9750 28 100.0 32 ............................ TGTATGACGATGTACTTCTAATTCTTTTACTC 9690 28 100.0 32 ............................ AACCCCAACCACTGCTGCTGCTACTGGCATAA 9630 28 100.0 32 ............................ TGCCATGAAAGCATGCCAACATTTATAGCTTT 9570 28 100.0 32 ............................ GTGCGCCAGTGGATCGCTCAATGTGGACGTCT 9510 28 100.0 32 ............................ GAACTCACAGCTAACATTGTGGGCGTGGCCAG 9450 28 100.0 32 ............................ TTATAGGGGCAGCGTTCTACCTGCATTTAAAT 9390 28 100.0 33 ............................ TGTGCCAATTTGCCCTGACACTTCACCGATGAT 9329 28 100.0 32 ............................ TATTTTCTTCTGCACAATCAATACAGCACAAT 9269 28 92.9 32 ..........A..C.............. ACAAAAAGGACGGAAATTAACTATCTGAAGCA 9209 28 92.9 32 ..........A..C.............. ATATCAGAAACTCTAAAGCTATTGGAGTGAGC 9149 28 89.3 0 ..........A..C.............G | ========== ====== ====== ====== ============================ ================================= ================== 130 28 99.8 32 GTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TTAGATATTCGAAAATGGCTGGAACGTTTAGAAGATTATGTGCATATTACATCAATTCGTGAAGTACCTAGCGATATTAAAGGCTATGCCATTTACAAGCGTAAGCAAGTGAAAACCAATGCCCAGCGTTTGGCACGGCATCGTATTAAACGTGGAGATATTGGCTTTGATGAGGCATTAGCAAGATATAGCAATGTAGTTACCACAACGAACTTTCCATATATCGAAATGAAAAGTCTGAGCACTTCAGATCAGCAAAGTGAAAAACGTTTTAAATTGTTTATCGAAAAGCAACCTGCTGAAAAAACCAAAACTCAGGTTTTTAGTACTTATGGATTAAGTTCAGTATCATCCGTACCCGAATTTTAACCCAATATTTTTTCACTCTTTAACAGCTTAATAAAATCAATAAGTTATAATAGTAAGTTAATACTTGGGTCTTTTATAGGATTTTAAGCATAACTTGCTGTTATAGCTTTATTCTTTATGTTAAAACTATT # Right flank : TATTATTTTCAGTTATACTTATGCAAGCGAGATATTCTGTAAGTAATTCTTGTAATAAAAGCCAATTATTTCAGTGAGATAATTGGCTTAAGTGAGAGTTGCGATTATCCGCTAATTCGTCGGTCATCCCAATAACACGGCACTACAATCAAATGGTTCTCATGTAACCGAGACCATAATCTTACACCTAAATCCCGCTGTATATTTTGGACTGTGAAATTGGAAATCAGCAGGGTAGATTTCATATTGTCATAACGGCTATATAGAACCTTATGTACCATCTCTAGGCGTTTTTCATGCCGGTCATGCAGGCCATATTCATCAATCACTAATAAATCAAAACTGGAGAAATGGTCGATGACTTCTTTCTCAGAGCGTGAAGTGTCTGACCAGGTATCCATCATTTTTTGAGCAATTTCTGCACTTGTATAATAGCGTGCAGATTTTGTACTGTTATGCAGAATGTTGCGAATAATTGATGCGCTCAGATGGGTTTTACC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched GTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [4-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [76.7-78.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //