Array 1 247546-245686 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACGFW010000003.1 Citrobacter braakii strain H2F15 NODE_3_length_752414_cov_82.996882, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 247545 29 100.0 32 ............................. CTGTGGCACCAGCGGGCGACGGTAGGGATTTT 247484 29 100.0 32 ............................. GATGTGTCCGCAGCCTCGAACAGCTTCAACCA 247423 29 100.0 32 ............................. CCTTTCTTGTTCTTCTCCTGAATACGCGCATA 247362 29 100.0 32 ............................. ACATGTTTGGCGCTATATTTCTTGATGAGTGT 247301 29 100.0 32 ............................. TATTGCACCGTCCGTTTATGATTGCCCCAGAG 247240 29 100.0 32 ............................. GCGACCGCGCCGATTTAGCATAAACTGCATTG 247179 29 100.0 32 ............................. GGAACGGATAAAAAGGCGTACATCCGCCTGAA 247118 29 100.0 32 ............................. TGGGATGCTAAATTTGTATTCACGCAGGATGA 247057 29 100.0 32 ............................. CTTACGGTTACCCTTCATCGTGGCTTGATGTG 246996 29 100.0 32 ............................. GTCGGAGGCTATCTGCACACGCCGCTAACAGC 246935 29 100.0 32 ............................. ATTAACGCCGCAAATGATTTCCTGATGAGTCA 246874 29 100.0 32 ............................. TGTCTAACGGCTATCAGCATGATCACACCTTT 246813 29 100.0 32 ............................. GCTAAACGTAACAACGCCAATTTGTGGGATAG 246752 29 100.0 32 ............................. ACTGGCACCAGTTCCCGCCCGTCTCTGTTAAC 246691 29 100.0 32 ............................. CAGCGATACAGGCCATTCCAGTTCGAGCCAAA 246630 29 100.0 32 ............................. GGCGTTAAAACCGAATCATATTGGCTGGGTGT 246569 29 100.0 32 ............................. TGCTCCGGCAGACGTAACAGCAGTGTTGTTTG 246508 29 100.0 32 ............................. CAATATTTTTACGGCCATAACCAGGCATGGAT 246447 29 100.0 32 ............................. CGAACGACAGATAAAAGAAATGCGTACCGGAA 246386 29 100.0 32 ............................. TCAACACGCTGACAGAAAAGCAGCGCCAAATC 246325 29 100.0 32 ............................. CCGCATAGAACGGGAGAACATGGGACAAAATT 246264 29 100.0 32 ............................. CCGCATAGAACGGGAGAACATGGGACAAAATT 246203 29 100.0 32 ............................. CCCGATTTTAACTTCGGTCAGATACTGCAGGG 246142 29 100.0 32 ............................. GGGAAGTAACGGCAAGCTGCCGCATTGTCCCC 246081 29 100.0 32 ............................. TTGCCCGGTGGGAAAAGTCCGGTGAAACAATC 246020 29 100.0 32 ............................. CTGTTGTTCAGGTCAACGTGGAGCCGTTGTTG 245959 29 100.0 32 ............................. CACACCCTAACGCCGGAAAAATGCTGCGCCAC 245898 29 100.0 33 ............................. CCGCCTAAATAATCCGGTTTTCCGTAAATCTGC 245836 29 100.0 32 ............................. CTATTTCCATCCGTAGAAATTCTGGAAAATTT 245775 29 100.0 32 ............................. GAACATCCTGAAGTACACATCAAAAACGAACC 245714 29 89.7 0 ............T............T..A | ========== ====== ====== ====== ============================= ================================= ================== 31 29 99.7 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTCCTTGACGCTGGCGAAATAGACCCTCCGCAGCCTGCGCCAGATATGCTGCCGCCTGCAATACCGGAACCGGAATTGTTTGGAGATGGTGGTCATAGGGGGCGTGGTGGATGAGTATGGTTGTCGTTGTAACGGAAAACGTTCCGCCGCGTCTGCGAGGGCGTCTCGCCGTCTGGCTGCTGGAAATTCGTGCGGGTGTTTACGTTGGTGATACCTCTAAGCGAATTCGGGAAATGATTTGGCACCAAATCATACAGTTGGGCGGAGCGGGAAACGTTGTGATGGCCTGGGCGACAAACACGGAGTCAGGTTTTGAGTTTCAAACCTGGGGAGAAAATCGCCGTATTCCGGTAGATTTGGATGGACTTAGACTAGTGTCTTTTCTTCCTTTTAATAATCAATAGGTTGAGTGTTCTTTAATAAAACGGAATTGTTGTTCCCAAGTTGGTAGATTGTTACTTGATGAAAATTGCAATAGAAAACAGTTATATATATTTAGT # Right flank : CTTTGAAAGCAGAAATATTATGGGGCTGGATGGGTTACGAGGATTTACCCGCCTTTGCCAGTTCTTTCACCAGCGGGAGCATAATGCGTACCACGTCGCGGCTACGGTGCTCTATCCTGCCCGGTAAGGCTTTATCGATATGCTGCTGGTTATCCAGTCGCACATCGTGCCAGCTGTTGCCTGCCGGGAACGAGGCGCTTTTGGCGCGCTGTTGATAGCCATCTTTCTTGCCCAGACTCCAGTTGGTTGCTTCAACGGAGAGCACGGCAATGCCCGCGTTGTCAAAGACCTCTGCATCGTTACAACATCCAGTACCTTTCGGATAGTTTTTGTTCAGTCCCGGATTGGTGCTGGCTACGATACCGCGGCTGTGCGCGATGGCCAGCGCCCGGTCGCGCGTCAATTTTCGCACCGCTTCCGGGGTTTTCTTACCGCTATTGAAATAGAGCTTATCGCCGACGATCAGGTTATCGAGGTTGATAACCAGCAGCGTATTTTTC # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [4,5] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.00,-13.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [53.3-75.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.92 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //