Array 1 200258-201080 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ836077.1 Streptomyces qinglanensis strain 172205 Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 200258 28 100.0 33 ............................ CACGGGATCGTCGGCTACGTCCGCGTGTGGGAG 200319 28 100.0 33 ............................ TCCCGGCTGTCCCCCCGCGCCCCCGACTCGGCA 200380 28 100.0 33 ............................ CGACGATCGCAACGACGCTGGGAGCCTGACATG 200441 28 100.0 33 ............................ CTTTTTTCTACCCGGGACGAAACAAAAATAAGG 200502 28 100.0 33 ............................ CGCTCAGGTCATGGCGGACGGGCTCGCGGACAA 200563 28 100.0 33 ............................ GCCCACCATGTCGGGCAGCTCGCCGGGCATCCC 200624 28 100.0 33 ............................ GATCGGGTTGGAGCTGTCCCGGCAGGACCTCAA 200685 28 96.4 33 ............T............... CTTCCTTCCGGTGCGGGCCTACGCCGAGCAGAC 200746 28 100.0 33 ............................ GCCCCTGCGTTGGCTGTGGGGCCGCCTCGGTCG 200807 28 100.0 33 ............................ GCTCCTCCCGCCCGGCTGCCCCGCCCTCTACCA 200868 28 100.0 33 ............................ GGCGCCTGTCCGCTTTTGCCTCGGCAGGTCCGG 200929 28 100.0 33 ............................ CAGCGCGAGCGTCCACGGCAGAGGCTTCCCCTT 200990 28 96.4 33 ...........G................ GCCTGCGCCCGCCCGCGCCGCGTCGGCTCGGCC AC [200994] 201053 28 89.3 0 ..........TG..............T. | ========== ====== ====== ====== ============================ ================================= ================== 14 28 98.7 33 GTCGACCCCGCACCCGCGGGGATGCTCC # Left flank : CGGGCGGCCACGAACCGCACCCAGGCAGCAGCCGGACTCCGAGACAGCGCGCCGAAGCCGCAGCACGGCACACCGCTACCGTGGGATGAGATCGCCGCACTCGTCCGAGCAGCCGGGAACTTCACGGCGGCCATCCACCAGGCCGACTCCACGGACCAGGCCGAGCTCTGCAAGAAGCTGGGAATCCGCCTGCGCTATGACCCCGCGCAGCAAAAAATCCTGGTCGAGAGCCATCTCGACCAGGACCTGAGCGGTTCCCGTGGGGTACCAGTACGTGTCGGGAGGGCGTATCCGACCATACGCACACACTGGTGGCGTTCGGGGCGCTGGACGTGCGGCAAGAGTGACCAGTGCGGCGGTGCCGCGGGTCTTGCGTCGACTCTTCGATCGTCCCCGTCTCGCGGCCTCCGCCGAGTCCGGCGCTCCGGAGCAGCCTCACTGTGGAGAAGCAACTGAATGAAATAGGCTAGGCCACTGCGCAAACGCTATGGTCAGCAAGT # Right flank : CGAGGGGCGGCGTCCATGGTGATGCCGAAGTCAGCTCGACCCCGCCCGCGGGGCCGGTCCGGCGGTGGGTTGCCGCGAAGGCCGCTGCAGCGACCTTCGCGGGCGTGGGATGGTCTGGAGTCTTATCACGCCACCGCTTCTTCCTTCCTCCACAGAGGGACGCTGGTCTTGAGTTGGTTCGTCGAGGCGTTGGACCGAGGGCCAGTCCTTGCGCGCCGGGGTTCTCCGCCTCTTCGGGAAGCCGAAAGTGCCGGGATGCTCGCTGGCTGGCGCGCAAGAGGGAGTGGACCGGTGGTGGTGGGGTTCCGGCGGCATCGGGCTGAAGCAACCTCGATTGTCAGTGCTGGCATTTACGCTCCATGCCGACGAGTTAGGGGAGGAGTGGGTGGCTGTGGAGCGATGGGGGTACGCCGCCGAGCTGGGGGTGTTATGGGGCAAGTCGAAGGAGCGGGCCGGCGGGCGGATGAACCTGCTGATGTCCCACCTTCTCGATACGGGTG # Questionable array : NO Score: 6.20 # Score Detail : 1:0, 2:3, 3:0, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCACCCGCGGGGATGCTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [3,3] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGGCCCCGCACCCGCGGGGATGCTCC with 97% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [50.0-23.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 2 210957-213544 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ836077.1 Streptomyces qinglanensis strain 172205 Scaffold2, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================== ================== 210957 28 100.0 33 ............................ CTGCTGGGCGTCTTCCGGCCGGGGGACATCCAC 211018 28 100.0 33 ............................ CGGCAGCCGCTTGAAGTGCCGCAGGGTGTGGGC 211079 28 100.0 33 ............................ TGCCGCCCGGCAGTCTGGGGCCCGGCCGGCCCC 211140 28 100.0 33 ............................ GTCCTGGACTACGGATTCGTGCTGAGAAGCGGT 211201 28 100.0 33 ............................ GCGGTGATGGAGCGCGTGGTGGGTCAGGCCGCG 211262 28 100.0 33 ............................ GCATCGACGACCAGGCCACGCTCGCGTTCGCCC 211323 28 100.0 33 ............................ GCGGAGCACACCACCCTCGATGCGCTGCTGGAC 211384 28 100.0 33 ............................ GAACATGACGCGGTCGACCGCGAAGCGCTCCAT 211445 28 100.0 33 ............................ GCCGAAGCCGTCCACGTACAAGCTCATGAAGAC 211506 28 100.0 33 ............................ TCGGTATCTCCGGTACCTCCGCGCCCAGGACGA 211567 28 100.0 33 ............................ GCCCCAGGGGTCGCCGCTGCGGCGTCCAGGACG 211628 28 100.0 33 ............................ GCGCTGGGACGACGGTGCGATGTCGTACGCGAC 211689 28 100.0 33 ............................ GCGTACGACGAGGCATTCTTCTCCCGGGGCAAG 211750 28 100.0 33 ............................ CACCTCTGCCCCTCGCCATCGGGGCGCACCTCG 211811 28 100.0 33 ............................ GACGGGGTGCTGGAGAAGAAGTACGGCACCAGC 211872 28 100.0 33 ............................ CCTCTGCGCACTGCTCGGTCGTGCCCGTGCTCC 211933 28 100.0 33 ............................ CCTCGGGCATCACCGCCTGCCGGGGCTGCGGCC 211994 28 100.0 33 ............................ CTGCGCCCCGCTGAACGAGGCGTCGCCGGAGAA 212055 28 100.0 34 ............................ GTGCATGAGCACCTGTCACTCCCCCCCCGAAGTC 212117 28 100.0 33 ............................ GCCCACCGCCAGATGGTGCCGACAGGCTGGCCG 212178 28 100.0 33 ............................ GGTCACGCACCTGCTGTTCCAGGTCCGCGATCC 212239 28 100.0 33 ............................ CCCTCTGTCAAGTTCAAAGGTGTGGCCCCGCCG 212300 28 100.0 33 ............................ CCCGCCACTGGCAGGGAGGAGGACTCCATCGAC 212361 28 100.0 33 ............................ CGCGACTTTCCCCAGCTCACACCGACGTACCAC 212422 28 100.0 33 ............................ CGCGCCTTCCCCCACGCTCAGCCCACCGGCCTG 212483 28 100.0 33 ............................ CCACCGGCTGTGCGGCCCGATGATGCTGGCGTT 212544 28 100.0 33 ............................ GTTGCAGCGGTTTCGGGAGAGGGGGCCCTACGC 212605 28 100.0 33 ............................ CCGCCACGGGCTGCTGTGGTGCATCGTGCAGGC 212666 28 100.0 33 ............................ CTGGGCGAGGGTGATGCCCGCGCTCTGCTCGGT 212727 28 100.0 33 ............................ CGACTTGTGGGTGTCGTACCGGACCTTTTCCCC 212788 28 100.0 33 ............................ GACCCACCTCGCCGAGCACACCAGCTCCGCCGC 212849 28 96.4 33 ........................C... CTCGGAGTGCGGGAGCCGCTTGAGGCAGTGCGC 212910 28 96.4 33 ........................C... GTCCTCTCCGGTCCGGTTCGGGTTCCGGTAGTA 212971 28 96.4 33 ........................C... GGTGAGCGACCTCGCGTCGACGTTCGATCTCGA 213032 28 96.4 33 ........................C... CCGACGTCACCCGCCGATACCGGTCAGCCGCCA 213093 28 96.4 33 ........................C... GGCGGAGGACGGCATCGCCAAGCTCCAGCGGTT 213154 28 96.4 33 ........................C... GGCGAGCACCGACAGGGAGGAGTTCGGGGCTCT 213215 28 75.0 22 ..............GA..CC.CC...G. CGCCCCGTTCGGCGTGCACTCC TGCTC [213231] Deletion [213265] 213270 28 96.4 33 ........................C... GTGATGGCACGCAGCATGCACGAGTCGGCGACG 213331 28 96.4 33 ........................C... GGGCGGCGGGGCCGGGTGCCCAGTGCTGGGCAC 213392 28 96.4 33 ........................C... GGTGCCGAAGAGCGAGAAGCAGTCCTTCACGCT 213453 28 96.4 33 ...................A........ GGCGCAACGAGTACCCAGCCCACGCGTGCGTTG 213514 28 78.6 0 .............G..G..AC.....GA | C,CG [213534,213537] ========== ====== ====== ====== ============================ ================================== ================== 43 28 98.1 33 GTCGACCCCGCGCCCGCGGGGATGTTCC # Left flank : ATCGAAGACGTCAAGACCCTCCTCACACCAGACGGCACCGACATCGACGACGCCGAAGCACACCTGTTGTGGGACGAGCACCTCGGCACCGTCCCCGGAGGCACCGACTGGTCCGCCGAGGACACCCACATCGCCGTCATCGGCCCCGAAATCGACGAGAGCGGACCCGCCCGATGACGGTCATACTCCTCATCGCCGCCCCCGAAGGACTGCGCGGCCACCTCACTCGCTGGATGGTAGAAGTCAACGCCGGAGTCTTCGTCGGCAACCCCAGCCGCCGCATCCGCGACCGACTATGGGAACTGCTGGCCACCCGCATCGGAGACGGCCAAGCAGTCATGGTCGAACCAGCCGCCAACGAACAGGGCTGGGCCACCCGTACCGCAGGTCGCGACCGCTGGCGCCCCATCGACTTCGACGGCCTCATCCTCTCCGCCCGCCCCCGAACCCAACCGAACGAAAACACCCCCACACCGCGATAAACCCGCTGCTCAGCAAGT # Right flank : ATGTTCTTCTGGCCATTAGCAAAGGACGGAACACCCCCGGGGCTGATGCATGGTCTGGTGACATCTTGACCTGCCCCACGTCCTGGGTTCCAGATGTGGTCGCTAACTGGCAGCCCTTCGCGAAAGGCTGTCAGTCATGCCTCGTCCCTATCCGCCGGAGTTCCGGGCGCGTGCCGTCGCGCTGGTCCGTGCCGGCACGCAGGCCAAGCAGACCGCGGTCGAGCTCGGTGTCCATCCCGTCACGCTGTCGAAGTGGTTGCGGCAGGACGACGTGGACAACGGGCGGCGACCGGGAACTCCGTCGAGCGAGTCCGCTGAGCTGCGGGCTGCCCGCCGGCGGATCCGCGAGCTCGAGACCGAGCTGGGCATCGTCCGGCAGGCGGCGAAGTTCCTCGGCGAGGACACACCCCGCCCAAAAGGCTCCACCCGATGATCGACCGACTCGTCGATGCCGGGGCTCCGGTCGACAGGCGCTGCCGGATCCCCGGGGTCGCCCGGCA # Questionable array : NO Score: 6.18 # Score Detail : 1:0, 2:3, 3:0, 4:0.93, 5:0, 6:0.25, 7:-0.00, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGACCCCGCGCCCGCGGGGATGTTCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [2,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGACCCCGCACCCGCGGGGATGGTCC with 96% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-12.70,-12.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-12] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [40.0-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], // Array 1 323880-323668 **** Predicted by CRISPRDetect 2.4 *** >NZ_KZ836082.1 Streptomyces qinglanensis strain 172205 Scaffold7, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================ ================== 323879 29 96.6 32 ............................C TCGTAGTCCGGTTCCTTGACCAGCCTCAGGGC 323818 29 100.0 32 ............................. GAGTGGAAGCGGCCGCTGGTGGTGCCGTCCTG 323757 29 100.0 32 ............................. TCGCCGTTCTGCTGGCACGCGAACCCGCCGAA 323696 29 96.6 0 ........G.................... | ========== ====== ====== ====== ============================= ================================ ================== 4 29 98.3 32 GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Left flank : CGGCGGAATCGCACCGCTGAGGTTCGGTGTCCAGCGCATGGCCCGGCAACCGTCGACGGACCGCTCACAAGCCTCCTGAACCACGGCGCTGACCACTTGTGTTCACCCGGGTGCGAGAAGAAGCGTCGACCCCACGCGCGCCGAATGCAGCAGGCAGCCGGACCGGCCGATCCGCACACAGGTCGGCGCAGGGACCAGCGCCCAGTCTCCAAATCTGCCCCGCTCAGGGCAGGCGGGTCCTCCACGACCGCGACTCGACCGAGCGGGGAAACCACGACGCGCTACCGGACCACAGCTTGGCTCACGCCGGCCCTCCCCCTGTTCGACCTGCGCTCCCTGGCGGCCGCCATGCCACTGAGACGCCCCGAACGACACCCGGCCCGAACAGGCTCATGGACCATCCACCCGTGGCACCGGCTCTCTGCCACCATGGACCAATGACAAGGATCCACAATGACAAAGAACTGGCAAAGCCCCACTAGCAGGGCAGGTCAGGAAGT # Right flank : TGGCGGCGTCTCGCCGACGAGCTAGTCGCCAAACACTGCCCTGAAGCCGACAAGGAGCCGGGGCGCCGTTCGGCGGGGTCCGGCAACCGCGCAGCAGGCAGGCGCCCATCACGGCCCATTCCGAGGACAACCGTCCGCTTATACCTGACTGTGCGTCAAGTTCGACCAGCGCATATCCAGCGACCGTACGGACAACGACAGGTGATGACAGGTGACGCGACGTATCAGTTTCACCCAGCGACCAACCAGCGAAGGAAGACCCAGCGGGGTGGGCCCAAAATGGGCAAACCCCGCCTGACCTGCTAGTTCGACTGGGCAAGGAAGGCCAGTCAGCCGTGCTCGCTACACATTGAAGCGGAACGTCGACGGCATCGCAGTCACCTGCGAAAACGCGCCGCTGCGGGACAGTAAGCAGCACACAACCAGCAACCGTCGACGGTCCACACGCAGTTCAACGTGGGATAACCGCGGTCTCCGCATCTCTCCTGCTCGGGGCAGGG # Questionable array : NO Score: 5.77 # Score Detail : 1:0, 2:3, 3:0, 4:0.91, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCGAGCGGGGGTGGTCCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [4,1] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCTCCCCGCGCGAGCGGGGGTGGTCCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.20,-13.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [1-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [33.3-48.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //