Array 1 13126-11561 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJOO01000022.1 Lactobacillus helveticus strain FAM19188 FAM19188_scf0022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 13125 32 100.0 35 ................................ ATTGATAAAAGACTGATACATGTGGCGAGTAACCT 13058 32 100.0 35 ................................ AAAGACGTGTGAATGGTCAATGGATCTTGTACAAG 12991 32 100.0 34 ................................ GTATTCCAGCCAAAGCAGATGGCTTTGCCACCTA 12925 32 100.0 35 ................................ ACCGGTGAATCGTAAATGTTAATCGAGCCACCAGC 12858 32 100.0 34 ................................ ATATGAATTCCTTGGCTAGGGCTTTGAGCACTGA 12792 32 100.0 35 ................................ TTTCTACTGGTTTACCATCTGGGTTTCCTGATCTT 12725 32 100.0 35 ................................ TGCAGAAGGTTAACAAACTTAAGCCAGATTATCTT 12658 32 100.0 35 ................................ AGTGACGTGCCATCAGTTAACCAAAAATGTACCTA 12591 32 100.0 34 ................................ CATTGACTGTTAGTGTCAATGAGATGGATTTAAA 12525 32 100.0 35 ................................ AATTAAGTATAATCATAGGGGCAATAATTGCTTAT 12458 32 100.0 36 ................................ ATTCAAAGGAAGTGGTTTAAGAAGTGAAAATTGATC 12390 32 100.0 35 ................................ ATAGCGCTATTAACAAACAAGTTATGCAACCGCTT 12323 32 100.0 34 ................................ TTTTGACTTTTGCTTGTTACGACTAATCAGGAAA 12257 32 100.0 35 ................................ AATCTATGTAAATAAGAAGTGTCAGAAGTTAAGCC 12190 32 100.0 34 ................................ ATATGCGTCAGTTTCGCTTTCATGGTTAAAGCAT 12124 32 100.0 35 ................................ ACTAATGGAATATCCTTCATGCGCAAGCCTGTAAA 12057 32 100.0 34 ................................ TTTAGTGAACAAACTCCGTTGCGATACCGTCACT 11991 32 100.0 35 ................................ TAAAATACAGTTGACTTTTTAGAAGATTTAAGTAA 11924 32 100.0 35 ................................ TAATATCTGTGAAGCAAACAAGGATCACTTCCTTG 11857 32 100.0 34 ................................ TTAAACGCCTACAAAGAACGTCACAATGCAAACA 11791 32 100.0 34 ................................ ATCAAAGCTATCCTGCTATTGCTGATGGCTGGTG 11725 32 100.0 34 ................................ ACTAATGAAGTAATCAGTAAGGTGTTGGGTTACA 11659 32 100.0 35 ................................ AAGGATATTGACGGTACTGTGTTTGAAGTTTTCGG 11592 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ ==================================== ================== 24 32 100.0 35 GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Left flank : GGAGATCTTGACGAATACCCACCGTTTATGTGGAAGTAGGTATGCAGCATGATGGTAGTAGTTAGTTACGATATTAATACGGAAAGTAAATCTGGTCAGCGAAGGTTACGTCATGTAGCCAAAATATGCTTAGATTATGGACAACGAGTTCAAAATTCCGTTTTTGAATGTAAAGTTAATTCGATGCAATTAGAGTTGATGAAAGAAAGACTACTAGACGAAATCGATGATAGCCAAGATAGTTTGTATTTTTTTAATTTAGGGAAGAATTATAAAAATAGAATTAAGTCATATGGAATTAAAGAGGTTATAAATTTAGAATCGCCTGTAATATTTTGATATCGGTGCGAACTGTATGTGAACATGCTTTTAGGGAAGATTCGCACCAATTTTAAACAGGTGAAAAGTGATCTTTTGATAAAAAATATATTTTTATCAGGGTAAGTTAATTTGAAGCCCAATATTTAGAAATGAATTGAAATCATGATCTAAATATTGCG # Right flank : TTTAGGTCCATTGCGCTCTTGCCAGTGAAGTCGTGTCGCACTCCTTGTGATGCACTTGTGGGTGTATTAGTCGGCTTCTTCAACCCAGGCTTGAAGTACTAATTATTAAGAGGAGATTATTCAGATGACAATCGAAGAGATGCAAAAAGGCTATCAAAATGAAGTTGCTTATCAAAAACATATGCTTCGCAATCTAGGCTATTGATTCCAACTCTTTTTAACAGTTAGTGCGATTGGTTTGGTTTTAATTTACTATTTCCATCAATCAACTATGTGGCTCTTTATAATCGGAATTATTCTGATGGTCGCCTGTGTTTTAGGAATGTTTGCTTTTGGCTATGCTTCTTGGCGCGGACGGCAGAATGTCACTCTGGTAATCGAAGACTATGAGAAAAAGATTGCAGAAATTAAAAAGTTAGATCAAAATGCTTCCGGAACGGAAAAGATCCGTTTCAAATGATTCTTATATGAATAAAACAATTTCCCCTTCTCTAGAAATT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCCTTGTGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: F [10,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCACTCTTAGTGAGTGCGTGGATTGAAAT with 94% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.50,-3.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [48.3-73.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,9.64 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //