Array 1 217807-214971 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADZHZ010000048.1 Shewanella algae strain 404 404_48, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 217806 29 100.0 32 ............................. ATGGTGGTTGCTGGCAGGCCGAAAGGTTCCGC 217745 29 100.0 32 ............................. TCAGAGGATGCCGCACGAGTTGAAATAGCTCT 217684 29 100.0 32 ............................. GACGTCTGTGTGACCGTCTGGAAAGCCCTGCA 217623 29 100.0 32 ............................. GCTAGGAACTCTATTTTAAGGTGTCTAACTCC 217562 29 100.0 32 ............................. GACTCAATTAGGTTCAGGGCTTGGCTGGCAAT 217501 29 100.0 32 ............................. CACGAACAAGGTAAGCTGCCGACTTCACTGAA 217440 29 100.0 32 ............................. ATGCTGTAACAGTCACTGACTTGGCTGACAAA 217379 29 100.0 32 ............................. CGGTAGATTCTGTCTTGTTGATGAGCAACACA 217318 29 100.0 32 ............................. TCTGATGTTCCTTTCTCGTTTTCCGCATTGAA 217257 29 100.0 32 ............................. CCGCAGAAGGCGACAGCCGTATGCAAGAGCAC 217196 29 100.0 32 ............................. AATGTTGACACATTAACGAAAAAGCTTACAGG 217135 29 100.0 32 ............................. CGTTGACCACATTGAACTTGAGTGGCTTGGTG 217074 29 100.0 33 ............................. CGCTGCGTTTCTCGAAAAAACGCTTAGCTGAGC 217012 29 100.0 32 ............................. CACCTCAAGCGCCCCGGCCATGCCAACGGTAG 216951 29 100.0 32 ............................. CATTACAGTGATGCTGATTGGAAACCAGTACT 216890 29 100.0 32 ............................. CAGCAACATCAAACATCTCAGGCCATGTGGCC 216829 29 100.0 32 ............................. ATACTGCCACGCTTGTAAACTCTCTCTCATAC 216768 29 100.0 32 ............................. CCAGAACCTTCAGTAGCATGGTGAACTGCCAT 216707 29 100.0 32 ............................. CTGGCAGCGGCTTGACATCCATCAGCAACCGA 216646 29 96.6 32 ....C........................ CGTCTTTACCTCGCAGCTTGTTCACTGCGTTC 216585 29 100.0 32 ............................. GTGAGCGCAGATGGAACGATAGAGTATGAAAG 216524 29 100.0 32 ............................. CAGTAAGTTCAGCCCTAACCCAAGAGCCGACC 216463 29 100.0 32 ............................. TTGTCATCAGTGACGGCGGTTTTGATGCAAAG 216402 29 100.0 32 ............................. TATGATGAAACTGACAGTCGTGGCTATGTGAC 216341 29 100.0 32 ............................. AATATCATTAATGCCCATATCGGATATTCTAG 216280 29 100.0 32 ............................. GTCTAGCTGTTCATCGCTCCAGATAGGTGTGA 216219 29 100.0 32 ............................. GCTTCCCAGTCTGGATTACTAACAGGGTTTTC 216158 29 100.0 32 ............................. GCAATCAGCATGTTGGCAGCAATTGACACTAA 216097 29 100.0 32 ............................. GCTGGGAAATGATGATTGCAGGCAATGCCGCC 216036 29 100.0 32 ............................. TCCTGCAGCATAGTCGGCGATGGTTCGCCGGT 215975 29 100.0 32 ............................. AACCTGTTTAACCCACGGGGCTCTGCGCCTGT 215914 29 100.0 32 ............................. CCGCTTGAGTATGTCGAGCGTGACGGCTACAC 215853 29 100.0 32 ............................. CACAGATCCAACACACCTACAGCAGTGTTGCA 215792 29 100.0 32 ............................. CGTTCAAGACTTTATTGACGCACAATCAACGA 215731 29 100.0 32 ............................. GATGCGTTTATTTCGCATCACAGATTTAATAA 215670 29 100.0 32 ............................. CCCCGGCACCCTGCACAGCAATATGATACTGA 215609 29 100.0 32 ............................. CCCCGTTGGAGCTGCAGGATTAGCTCAAATCA 215548 29 100.0 32 ............................. CCTTATCAATTCCGCAGTTGCCGCAGGCATGG 215487 29 96.6 32 ............................A ATTTGAAAACAACCTTGTCGGCGGCTGTAACT 215426 29 100.0 32 ............................. CTTGCTGAGTACGACAGCGTTTATACCATTCA 215365 29 96.6 32 ............................A GCACAGCTGACGCAATGAACGATGTTAGTGAG 215304 29 100.0 32 ............................. TGGAGAGCATTAACAGCATAGAGGCGGTTAAC 215243 29 100.0 32 ............................. CCTGTTTTCTCCCTGGTCAATGATATGGCCGC 215182 29 100.0 32 ............................. CTCGGCAGCAGGCCAGAGCGATATCTGGATTG 215121 29 100.0 32 ............................. GCTATTGATTATCGAATGCAAGTGTCATATCG 215060 29 100.0 32 ............................. AGTAAAACCCGCCATGGTCGCCCAACAAGCAA 214999 29 79.3 0 .......................TCTTTA | ========== ====== ====== ====== ============================= ================================= ================== 47 29 99.3 32 GAGTTCCCCGCACCCACGGGGATAAACCG # Left flank : GGTACTGGCAGCCGGTGAAATTGAGCCGCCTCCAACTCCAAAGGATGCCCAGCCCATTGCTATACCAGAGCCGAAACCGTTGGGAGAACAAGGACACAGGAGCCAGTAACTATGAGTCTGTTGGTTGTGGTGACCGAAAATGTACCGCCTCGCTTACGTGGTCGTTTGGCCATCTGGTTACTGGAGGTGCGTGCCGGGGTTTATGTGGGAGACACTTCCCGCAAGGTGAGGGAAATGATTTGGTATCAAATCAGTGAATTGGCTGAGGAAGGCAATGTGGTGATGGCCTGGGCCACCAATACAGAGTCAGGATTTGAATTTCAAACCTTGGGTGAGAATCGTCGTATGCCGGTGGATTTGGATGGTCTGCGACTGGTCTCATTTTATCCAACTGAAAAATAACAAAATATTGCTCTTTAACAACTTGGAATAATAGTCTAAAAAGTTGGTGAATATTTTTAAGTGAAAAATTGCTTAAAAAACAATAGTATTTGCCAAGA # Right flank : CTGTACAACCCCAGAAAAAGCCGAACGTCCTGCATTTGTGGGGCTGAAGAGGCCGAAACTGAGGAGATCTAAATAGCGGCCCGACTCAAGGCAGCATGTCCACTCGAAGTAGTCTGCTGGCGCTGCGGCCTTTGTCGTCGCTGACCGATAACTGGAAGCGTCCGGCTCTGGGTGGGCGCCATTCCAGGGTTTGGCCCGGCAGGCTCTGGCCGAGCAGGCTGTTACCGGCAAACCAGTAGAGTATTTGGCTGTCGGAGGCGGCGTCGGCCTTGAGGGCTATGTGTTCATTGGCCACGCTTTGGCGCAGGCTGTAGGTGACGCCTTTCAAGGGGGAGCGGATAAGCGGGGCCGAGTAGCTGACCGCGACTCTTTGGCTGCAGGCGACCGGAAGCTCCGGCGGCCTCCTGCGGGGTAAACCTGCCTGCTCGAACAGGGCCGCCAAGTCTGACGGCCAGAAGGCAAACACCTCCTGGTGGTGAATTGCCGAGTCGTAGGGCGGG # Questionable array : NO Score: 6.22 # Score Detail : 1:0, 2:3, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GAGTTCCCCGCACCCACGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [3,7] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGTTCCCCGTACCTACGGGGATAAACCG with 93% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-10.00,-9.10] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [46.7-76.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //