Array 1 1738609-1734338 **** Predicted by CRISPRDetect 2.4 *** >NZ_RKHQ01000001.1 Salana multivorans strain DSM 13521 Ga0197523_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ===================================================================== ================== 1738608 28 100.0 33 ............................ CTGCTTCGGGTCCACGACGGGGCCCCTTCCTGC 1738547 28 100.0 33 ............................ CCGGCGCCTGTGCGTCCTGCACTTCTCGCTCAC 1738486 28 100.0 33 ............................ CGAGGCGCTCAAGGCGCTCGGCAACGGCGTCGT 1738425 28 100.0 33 ............................ CTTGTACGAGCTGACGCTCGCCTGCCCTCCGGA 1738364 28 100.0 33 ............................ GCTGCGCCGTCAGGGCGGCCCCGACACCGTCGA 1738303 28 100.0 33 ............................ GAACGGCAAGCCGCGACGCACCTGGCTCCAGCG 1738242 28 100.0 33 ............................ GAACTGGGAGTACTCGTTGACGGCGTCGGTGAT 1738181 28 100.0 33 ............................ CGCGCGCTTCGCGGCGCGGGTCGTGTCCGCGGG 1738120 28 100.0 33 ............................ GAACTCGGCCTTGGCCGCCGGCGGGGTCTTGTC 1738059 28 100.0 33 ............................ CAGCCGATCGAACTGGACGTAGTCGCTCTCGCT 1737998 28 100.0 32 ............................ TCACCTACACCGACTCTCGCGGGCTCACCGGC 1737938 28 100.0 33 ............................ GCACCCGACGTCGGACCAGATCCGCTGGCTCGG 1737877 28 100.0 33 ............................ GTCGGGGACGACGTGCTGGGGTGGGCCAAGGGA 1737816 28 100.0 33 ............................ CATTGGCCGGACGAGCGCCTTAAGCGTGTGGGC 1737755 28 100.0 33 ............................ GGTCGTCGACCTGGAGATCCGCCGGGCGAAGCG 1737694 28 100.0 33 ............................ CGCCTCGCCCCAGCACTCGCGGTGGCCGTCGCC 1737633 28 100.0 33 ............................ GACGCCGGCCCACATCATCCGGATCCGGACACG 1737572 28 100.0 33 ............................ CACCTGGCCCAACACCCCGCCGACCGACCCCGA 1737511 28 100.0 33 ............................ CGCCGTCGCCCGCGAGGCCGCGCTCCTGCCCCA 1737450 28 100.0 33 ............................ CGTTGCACGCATGTCGAGCAACGTCCTGCATCT 1737389 28 100.0 33 ............................ CGGCGCCGTCGACGACAGGAATGTGCACATGTC 1737328 28 100.0 33 ............................ GGCGCGGAAGGAGGCGAACCCGCTCGCCCCCGA 1737267 28 100.0 33 ............................ CTGCGATGATGAGGCACTGGAAGCACTACGACA 1737206 28 100.0 33 ............................ CACCACCAAGCTTCTCAACGCCGTCGCGGAAGC 1737145 28 100.0 33 ............................ CTGGTGGAGGACGCGGCTCGTGTTGCCGGCGGT 1737084 28 100.0 33 ............................ GGGCGTGGCGGGGATCCGGCGCGGCGACATCTG 1737023 28 100.0 33 ............................ CTCCATGCGGGCATCGCGCCCACGTCGAGGGTC 1736962 28 100.0 33 ............................ GCTCGCGACCGGCGACACCGCCGACAGCTACCT 1736901 28 100.0 33 ............................ CACCTCGGACGAGAACCGGTCGCCAACCCACGG 1736840 28 100.0 33 ............................ CGACGTCCTCATGGGATCGGGCGAGTCCGTCCC 1736779 28 100.0 33 ............................ CTCGACGTCCAGCGACATCGCCGACGCCCAGTC 1736718 28 100.0 33 ............................ CCGGTACAGACCCGTCTCGCGCGGCATCACGAG 1736657 28 100.0 33 ............................ CAGCAGGCTCACGAGTCACCCCCCGGGCGGAGC 1736596 28 100.0 33 ............................ GCCATCGTCGCCCTTGACGAGCATGCGGCCGAG 1736535 28 100.0 33 ............................ CGGGCCCGCGTCGAACGACACTTGCTCGCCGGT 1736474 28 96.4 33 ............T............... GCTCTGATGGCCTGGACTCGGAAGCTCTCGTCC 1736413 28 96.4 33 ............T............... GCCGGAGCCGGAGCTGTGCCCGGGGTGCCTGGA 1736352 28 96.4 33 ............T............... CCACCCGCGATCAGCATGGACGCGTGGAAGTGT 1736291 28 100.0 33 ............................ GGCGGGGACGCGCTCGTAGCTCGTCCGTCCTCG 1736230 28 100.0 33 ............................ GCGCGAGCTGCTCGCTGGCGTGTCCCTCGGGGA 1736169 28 96.4 33 .C.......................... GGGGCGGAGGAAGTGAGGGCGTCGGGGCGGACC 1736108 28 100.0 32 ............................ GCCGCGCCGTGGCCGCCGACCCGGACGACGTC G [1736082] 1736047 28 100.0 33 ............................ CCCGCGCAGGACCACCGCTCTCGGCTTGAGCGC 1735986 28 96.4 33 ............T............... CGGGCGCGCGGCACTCACCGCGACCGAGGCGCC 1735925 28 92.9 33 ..........T.T............... GCCGACGACGTCTCCAGGCGCTCACCGCGATCG 1735864 28 96.4 33 ............T............... GTCGGTCGCGCGGGGGGTGACGGCGGCGTCGCG 1735803 28 92.9 69 ...T........T............... CTTCTTCCAGCAGCGCACGCTCACCGGGGATGGTCCGAAGTGGTTGGTGGTCCTTGGTGGGCTCCTCGT 1735706 28 96.4 33 ............T............... CCCGGAGTCGAGGACGCGGCGCAGGGTCCGATC 1735645 28 96.4 33 ............T............... CCGCACGATCGCCACCCGCGCCGACTTGCGCGT 1735584 28 92.9 33 ............T....A.......... GCTCTCCGCCCTCCAGGAGATCGTCGACGGGAC 1735523 28 96.4 33 ............T............... GTCGGGACACGGCCGACCTCCAGAGGTTCGCTC 1735462 28 96.4 34 ............T............... GTTCGCGCAGGCTATCGCGACGCTGGAGGCCGAG 1735400 28 96.4 33 ............T............... CGACACCGGATGCTGGGCCGCCGGGAACCGGCT 1735339 28 96.4 33 ............T............... GACGTGAACGCCGTCGCCGGAGACCGAACGCTC 1735278 28 96.4 33 ............T............... CTGGGGGTTGATGCCGCGGTCCGTGAACCAGGC 1735217 28 92.9 34 ...T........T............... GTTCGCGCAGGCTATCGCGACGCTGGAGGCCGAG 1735155 28 96.4 33 ............T............... CTTCGTCGCGCGCGCCGGAATGAGGGTCGTCTC 1735094 28 96.4 33 ............T............... GAGCCCCGAGCCGTAGGAGGCCCTGATGCGTGT 1735033 28 96.4 33 ............T............... CCTGCTGGCCGCGGGCGCGCGGGAGGTGTGGAT 1734972 28 96.4 31 ............T............... CGTGCCAGTAGGTGTCGGGGCGTAGGCGGTT 1734913 28 92.9 33 .C..........T............... CGACCTGCGCGAGCAGCAGAAGGCCGACACAGC 1734852 28 96.4 33 ............T............... CGACCTGCGCGAGCAGCAGAAGGCCGACACAGC 1734791 28 96.4 33 ............T............... CGACCTGCGCGAGCAGCAGAAGGCCGACACAGC 1734730 28 96.4 33 ............T............... GTCCGTCCGGTGGGTGCCCGAGTGGGAAGCACG 1734669 28 96.4 33 ............T............... CACTCGCCCGACCGACTCGCCCTGGTCGGACTT 1734608 28 92.9 33 .C..........T............... CACCATGACCACACCCGCCCCCTACTCGTGCGC 1734547 28 96.4 33 ............T............... CGATGCGATCGCGGCGTTCGCGCGGCACCCAGG 1734486 28 96.4 33 ............T............... CCACTGTGCGAGCATCCGGAGCTGCTCGATGTT 1734425 28 96.4 32 ............T............... TCGTGGGTGGCGATGGTGCCGCTCCGTCACGT 1734365 28 89.3 0 ............T.......A...A... | ========== ====== ====== ====== ============================ ===================================================================== ================== 70 28 98.0 33 GTGCTCCCCGCGAATGCGGGGATGGTCC # Left flank : TCCCGCGGGAGCTCGACGTGGTGGACGGCGTCGCACGGCAGGTGCCGGCGCGCGAGCTCGCCGGGCTGCGCGGGAGCGCGGTCGAGGTGGTGCGCGCCGGCGACGGGTGGGCAACCGTCGGGCTCGGACCCGCGTTCGGTGCCCGGCTGGTCGACGGCGCGGCGTGGGAGCTGGTGCTTGCGGGGTCGGACGGGGAGCGCTGCGCGCTGGCTGGGGTGAGCGCCGGGGGGATGACGGTGCTGGTGGACGGCTCGATCGTCGAGGTGTTCGACGAGGCAGCGACGCACACGCGTCGGGTGTACCCGCGGGACGGGGAGTCGTGGGTGCTGCGCGCGCGGACGGCCGAGGCGGTCGGGGGCGAGAGCGGGAGCGCGCCGGAGGTGTGGGAGCTGCGGGCACCCGCGGAGGCGTAGCGGTCAGAGCGAGGGGTCGGGACGTCGTCGATCCCACAACTGCATCCAGCAGAGCACCCGACCCGATATCGTCGCTGGTCAGCAAGT # Right flank : CTCCCCGACCTCGCTGTTGCCGGCCAGCGCGATGCCCAGCCGGCTGATCGCACTCCCGCAGTGCTCCTGCACCCCGGACCGAGCCCTAGCGCCCTCGTAACCGCCGCGCCGCGTGGCTCCAGTTCCGCGGGGCCCGGGCAGCCCCGTCCGCGCGCACCGGCTCGACCTGTACCGACCCCGCTCCGCCACCCAACGTCCTCGACGCTCCTGCCCCGGACCCGTCGGGGCGTTCCATCAGCATGAGGCCGTCGAAGTCCACCGGCTTCCAGTCGTGCCCGTGGACCCGGAACGCCAACCTCTGCTCGTTCCGTGCCGAGTGCACCAGGATCGCTCGCCCCCGGCCGACACCGTCGACGATCCGTTCCCACAGCAGATCCCGAACACGAGCTGAGACCCGCCCGACGAACACCCCCGGCGCGATCTCGAACAGCCACCGTGTCAGCACTCCGCGCAGTGACGGTGGGACCGCCGTCAGGACGATGACGGTCACCAGTCCACCA # Questionable array : NO Score: 5.98 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:-0.02, 8:1, 9:0.85, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGCTCCCCGCGAATGCGGGGATGGTCC # Alternate repeat : GTGCTCCCCGCGTATGCGGGGATGGTCC # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,3] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTGCTCCCCGCGAATGCGGGGATGATCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-12.10,-12.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [11-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [26.7-41.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.55 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //