Array 1 92482-89869 **** Predicted by CRISPRDetect 2.4 *** >NZ_RJML01000008.1 Streptococcus sanguinis strain KLC03 D8887_contig008, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 92481 36 100.0 30 .................................... AATCGGGAGAAACTGCCTGACCAAGTAAGG 92415 36 100.0 30 .................................... CCGTCTCAAACGTAACAATCGTTGACATTA 92349 36 100.0 30 .................................... TTTTTGTTTAAGCGTATCAACTATATCGCC 92283 36 100.0 30 .................................... TTGATAAAGAAAGTGGTGTTTCAGATGAAG 92217 36 100.0 30 .................................... ATTCCAAGACGATGGCCGAGATTATGTCTT 92151 36 100.0 30 .................................... TGATAATGCGTTTCGTATGTCTGCTGCTCA 92085 36 100.0 30 .................................... CTATAATCAACGAAATAAATATACTTTCCA 92019 36 100.0 30 .................................... GTACAAACCGAACCAATACACCAATAATTG 91953 36 100.0 30 .................................... TTTTGCCAGCTTCTGCTACTACATTGTCAT 91887 36 100.0 30 .................................... ACGCTTTCCTATGCCTTTTCTAATTTGCAT 91821 36 100.0 30 .................................... TAGAGATTTTATGGACGAATTAGCACGCAT 91755 36 100.0 30 .................................... ACAATCACCGAATTGTAAGAAGGGAGGTAG 91689 36 100.0 30 .................................... AACAAGTTACGTCTTGAAAGCATTGAGTTT 91623 36 100.0 30 .................................... ATGTAGGAGGCGACAATAAGCCTGCTACTG 91557 36 100.0 30 .................................... AATGATAAAGAATGCTATTGCTCCTGAAGC 91491 36 100.0 30 .................................... CAGCAGGATTTGCTATAGGTGATACATTAA 91425 36 100.0 30 .................................... ATTTTCTGTCCAGTCAAAACCAACTGGAAC 91359 36 100.0 30 .................................... TGATCACCTCAGTACTAGCCAAAACCTTGT 91293 36 100.0 30 .................................... TTGTACAACCAACGTATTTCATCAAGGTCA 91227 36 100.0 30 .................................... ATTAAATATGAAAACCTAGAATTTGCTTCT 91161 36 100.0 30 .................................... CAGTGTATTATTTAAAAGTGTCTTATAAAG 91095 36 100.0 30 .................................... CACACATGGCAACAAAACAAGCAACACCAG 91029 36 100.0 30 .................................... ATTTGCAATTTTTCAAATTCGTTTGGGATA 90963 36 100.0 30 .................................... AATGCTTGAAAGCTATATTCTTTTAACAAC 90897 36 100.0 30 .................................... CGGATACACTGCTAAACTAAATGAGTTCGT 90831 36 100.0 30 .................................... TTAGCCATGTTAATTTATCCAGATAACGGT 90765 36 100.0 30 .................................... CGGATACACTGCTAAACTAAATGAGTTCGT 90699 36 100.0 30 .................................... CGGATACACTGCTAAACTAAATGAGTTCGT 90633 36 100.0 30 .................................... CTCCACTAATTGCATTTTCAGTAACGATAG 90567 36 100.0 30 .................................... AATACTCACAAGGTCTTGACAACAAGTAAC 90501 36 100.0 30 .................................... AACTAAAATTTGACGCTCTCTACGGTTTAT 90435 36 100.0 30 .................................... AGGAAACAGCTTCTACATTTTCCGAGCCGT 90369 36 100.0 30 .................................... CGAACCGTGCTGTCTCCTGCATGACGTCCA 90303 36 100.0 30 .................................... CGACAAGGTAACCAGCATCAGCCAAAGTCC 90237 36 100.0 30 .................................... CTTTCAATGACCTACCAATCGGACGGACAG 90171 36 100.0 30 .................................... AAGTTCAATAGTTCGAAAATAGTAGTTCAA 90105 36 100.0 30 .................................... TGTTGATTATAGTACTAGTGGTGCTATTGG 90039 36 100.0 29 .................................... AAGCCGATACCGTAGTACCGATAGCCTTA 89974 36 100.0 30 .................................... TGATAACTCCTTCGTGTAAAGCCATGGAAA 89908 36 83.3 0 ......................TT.TT..T.....A | T,TA,A [89872,89875,89880] ========== ====== ====== ====== ==================================== ============================== ================== 40 36 99.6 30 GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Left flank : TCAACTAAATGATAAACCAGAAGTAAAGTCAAAAATCGAAAAGTTGTTAGTTGCGATTACAGAACTGCTGGGGTTTGAGTGTTTGGAAAATGAATTGGATCTAGAGTACGATGAAATCACCATTCTAGAGTTGATCGATGCGCTAGGAGTCAAAGTTGAAACTCTGAGTGACACACCTTTTGAAAAGATGCTAGAAATTGTCCAAGTTTTTAAATATCTTTCAAAAAAGAAACTCCTTGTTTTCATCAATGTGACCGCCTATCTATCAAAGGATGAGTTAGGAAATCTGATAGAGTATATCCAACTCAATCAACTAAGGGTCTTATTTGTCGAACCTCGGAAAGTCTATGATTTTCCGCAATATGTGCTTGATCAAGACTATTTCTTGAACCCTGAAAATATGGTATAATTAAGAGTAACAATTGGAATCTGGCGAGCTGAAGTCTAGCTGGGACGAATAGCGCGATTACGAAATTTCGTGAGAAAAATTTTTCTACGAG # Right flank : AGGACTGAATAAAACAGTCCTTTTGTTTTCTATTTCCCCAAGCAAAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAGGTGCGGGTCATATCGACTTGGAGTAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGTAGGCTTTCCAGGGCTTTTTCAATCAAGGAAATGTGACGGGCGTTGGACAGGTAGGTAGCGTCTTGCTCGACAATGCCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATCAATATTTTGATTGTGGAGGACAGAAATCTTGATAGCATCTGCTGGCAGCTGATCCAACTCAATCTTCTCTTCAAGGTCGGTCTTGTTAAGCAGGACGATGCGATTGCTGTCTTGGCTGATTTCCAGCAATTGTTTGTCTTGGTCTGTCAGAGGCTCGCTGGCGTTTAAAACTAATAGAACCAAGTCAGCTTC # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:61.11%AT] # Reference repeat match prediction: R [matched GTTTTAGAGCTGTGTTGTTTCGAATGGTTCCAAAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-4.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [65.0-60.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,4.87 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //