Array 1 369277-367628 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP007715.1 Actinobacillus equuli subsp. equuli strain 19392 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 369276 28 100.0 33 ............................ AGTACAAATAATACCGAATGTGTCAGTTTAATT 369215 28 100.0 32 ............................ TTTATTGCCCAAGATGAAGAAAGGTGTAATGA 369155 28 100.0 32 ............................ TATCCGCATTTAAGATTGATGTTGGTCTTCAA 369095 28 100.0 32 ............................ ACCCGAACCACTTGCAGCAGAACCATTACTTC 369035 28 100.0 32 ............................ TTTAGGTGATTATCCTCAAAGTGACAACTGGC 368975 28 100.0 32 ............................ TGACAACGCATTTTCCGCTTTAGCGGTGATCG 368915 28 100.0 32 ............................ ACCGAAAACGCCCAAGCTAAATATGGTAATAG 368855 28 100.0 32 ............................ TGTCATGCCAAGCAACTGAGCGACAAAAGCCT 368795 28 100.0 32 ............................ TTGTACGCCTAAAGGTATTATGACAATTTTTG 368735 28 100.0 32 ............................ TTTTTACAAAATATTCTAGGATATTGAAGAAA 368675 28 100.0 32 ............................ ATTTCCACGATTTCTTAACTTGTCCACCCATA 368615 28 100.0 32 ............................ TTACCAATATTTTGCTGAAATGAAATCTAAGC 368555 28 100.0 32 ............................ CTGCAGAACAAAACAATAGTAATCTTTACAAA 368495 28 100.0 32 ............................ AAGTGAAGGTGGGCGGAACGGTGGCAGTTGGC 368435 28 100.0 32 ............................ TCCAAACTCAATGCTCTATCTAAAAATCTAAA 368375 28 100.0 32 ............................ ACAGCGGAACCCTACGCACTCAAACGGTTTTT 368315 28 100.0 32 ............................ GCATTTGAGAACGCGCTGGAAGCGCACTTAGA 368255 28 100.0 32 ............................ TAAAAACGCATTCAGGCTATCTGCCTTGAACA 368195 28 96.4 32 ...............A............ TTTTTTTGCCGTAACATTACCGCTACTATCCA 368135 28 100.0 32 ............................ GCCTTCACGCCAGCCACACTTGCTGGTATTTT 368075 28 100.0 32 ............................ ACCTTTAATGTGCAGCACACCGGTCATCGTGT 368015 28 100.0 32 ............................ TTAGTTGCCAATGTCGCAAATTATTATGGTGC 367955 28 100.0 32 ............................ TTGCACGTGCGCACCAATTTCGCCGACTTGGC 367895 28 96.4 32 ...................A........ AGTGCTTATTTTGACTTGCAAGTGGGTGATAT 367835 28 100.0 32 ............................ CATAGTGAGTTTGTGCCAAATGTCTGCGCTGC 367775 28 100.0 32 ............................ ACTAAACGTACCACTAGCCGCAGATATATCAC 367715 28 100.0 32 ............................ AGAGATTTAAGTTGCTCACACCCGACAAATGA 367655 28 82.1 0 .......A.........T.......TCC | ========== ====== ====== ====== ============================ ================================= ================== 28 28 99.1 32 CTTCACTGCCGTATAGGCAGCTTAGAAA # Left flank : TAAAAACACAATTAATTGGAGAAGGTTTACAAGACTATGTGCTTATTACATCGGTAACACCTGTGCCGGAAGAAATAGTGGAATACTACCGTTACCAAAGGGTACATAGAAAAGGCCAAAGTGCTATTCGCCGTACAGAGAAATTTTTAACTCAACAAGGGAAATGGACTGAAGATGTTCGCAAAGAGATGCTAATACATCAACAGAATCAAAAAACATTTCCCCATGTAAAACTCAAGAGCAGTAGTACTAAGCAGCATTTTGTATTGGCAATACGACAATTTCGTTTAGCAGAACCCGCTTCCGGCTTATTTAACGCATATGGATTAAGCCAAGTAGCAACCGTTCCGCATTTCTAACCCATTTTATAACCCTTTTTTCAAGAGAATTCATTTTTCTTTTAGAAACAAAGGGTTATAAAAACCTTTCAAAAAAGGGATTTTTTGATTAAAAGCTCTTTAACAACTTGGTATATCTGACATTCTAAAGTAAAATAACGA # Right flank : ACAAAATAAGAGGAAATAATATGAAAAAAACACCTTATATTCCGTCTTCGGATTTAAAAACGATTTTACATTCTAAACGGGCGAATATTTATTACTTAGAACATTGCCGAATATTATTAAACGGCGGGCGTGTCGAGTATGTTACCGATAAAGGTAATGAATCTCTCTATTGGAATATTCCTATTGCCAATACTATCTGTTTACTATTGGGAAGTGGTACTTCGATAACTCAAGCGGCAATGCGAGAGTTGTCAAAAGCAGGGGTTATGGTTGGTTTCTGTAGTGGAGGCGGTACGCCGCTATTTAATGGGACGGAAACAGAAATCGGTTGTGATTTTTTTAGCCCTCAAAGTGAATATCGTCCGGTCGAATATCTACAGCAATGGTGTCGCTTTTGGTTTGACGATAACAAGCGGTTAAATTCAGCAAAAACTTTGCAATTAGCACGGTTACAATTACTACTTCGAACTTGGAACAAGTTCGATTGGGAATATGCTCAA # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTTCACTGCCGTATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: R [matched CTTCACTGCCGTATAGGCAGCTTAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [6-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [75.0-75.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.28 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //