Array 1 8882730-8873473 **** Predicted by CRISPRDetect 2.4 *** >NZ_CP017172.1 Myxococcus xanthus strain KF4.3.9c1 chromosome, complete genome Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 8882729 37 100.0 38 ..................................... CATGGTGTCGAACGCCGCGTAGATGCGGTCCACCATGG 8882654 37 100.0 35 ..................................... GTCGTACCCCTTCGTCGAGGCGGGGAGGCCGCTGG 8882582 37 100.0 34 ..................................... GTCCTCACCGGATGGGGCTTGGGCTGGCGCTCCA 8882511 37 100.0 35 ..................................... TGGTCGCTGATGCTCGCGCCCAGGGCGCAGAACTG 8882439 37 100.0 33 ..................................... CGCGAGCAACTCCGCGTGGACCTCATGGGGGTG 8882369 37 100.0 33 ..................................... GCCGCCTTGGCATAGACGTCTCCGCGCTTGCGG 8882299 37 100.0 33 ..................................... CAGGTGCTCCCTCCTTTGTCGCATTGACGTGTC 8882229 37 100.0 33 ..................................... AGGACCTGGTGCTGCTCACGGCGGGCGCGTCCA 8882159 37 100.0 35 ..................................... CGGAGAGAAACAGGTCAACGCCACCAGTCGAGCGG 8882087 37 100.0 32 ..................................... CGGTAGCTGGAGTCGCTACGGCGCTCCGCGAT 8882018 37 100.0 33 ..................................... CATGCGGTAGCCCAGCAGTTCCAGCTTGCCGCG 8881948 37 100.0 32 ..................................... ATGGGCAACCACCGAGGGCTCCACCGAGTGGC 8881879 37 100.0 36 ..................................... ATCGACACGCCACCCGAGCTGGGCCTGGAGCGCCTC 8881806 37 100.0 33 ..................................... TGGGTGATGCCGCCCTCGCCTCCCACCCCGCGC 8881736 37 100.0 33 ..................................... CTACGGGTGGCGGAGACGTGGGCGGCAATGGGC 8881666 37 100.0 32 ..................................... CTGATGAAATGGGCTGAGAAGCACGACGTCCG 8881597 37 100.0 35 ..................................... GTCACCTCCTCCCCCCTGTTGGAACTGCTGACGAA 8881525 37 100.0 34 ..................................... CGCTGCATCCCCTGCGTTGTTGCCGCAGTGAAGC 8881454 37 100.0 32 ..................................... AGCACCCACGTCCGCGACTGCCCGCCCGCCCT 8881385 37 100.0 37 ..................................... TTCGCCTCCGCCCGGATGTCGGAACCTTGGCCGCCAA 8881311 37 100.0 33 ..................................... ACAAGGATGTGGAGGGTCGCCGATTGGACGCGG 8881241 37 100.0 34 ..................................... TCGCCCAACGTCCCAGCGGTGTGGATGACTGCCT 8881170 37 100.0 35 ..................................... GAGGGAGTTTGGCGCTACGCGTTGCAGCGCGGCGC 8881098 37 100.0 35 ..................................... ACCTACCGGAACACGACGGGACAGCCCGTGGCCAG 8881026 37 100.0 34 ..................................... TACTGCTCGCGGCATGGCCGGGACCCTCGGCGCT 8880955 37 100.0 34 ..................................... ATGCAGTGCAAGTGGCTGGCGTAGCCCTAGCCCT 8880884 37 100.0 37 ..................................... CCACCACCGCGGCGGTGAAGACCTTGCCGTCCGCGGT 8880810 37 100.0 34 ..................................... CAGGTGCTCACGAAGCGCGCTGACCGGATGCGGG 8880739 37 100.0 34 ..................................... GCCGTCATCCACCCCCACTACCCGCACGAGGCCA 8880668 37 100.0 37 ..................................... TGAGTCCTCCCTCGCTGTGACGTGCGCGCGGGCGGTG 8880594 37 100.0 34 ..................................... AGCTGCGTGGCAACGTCATGCCTGTGAGCTCCAG 8880523 37 100.0 32 ..................................... AGCCCATTTATGGTGATGCTCAAGCCCGGATT 8880454 37 100.0 34 ..................................... GCGCAGGTGGCAACACGGACGGTAATCACTCAGG 8880383 37 100.0 33 ..................................... CAGGACTCGCACTCTGGACACTCCACATCGGCG 8880313 37 100.0 35 ..................................... TTCGCGGACTGGGCCGCGGACGCGATGACGCGCCA 8880241 37 100.0 33 ..................................... GCGAGGTGGTCGTTCACGCGCGCCAGCTCGATG 8880171 37 100.0 33 ..................................... GCTCCACCGAAGCGTGTGAACTGATTGAGCGCC 8880101 37 100.0 36 ..................................... GCCGCACCGTCCTCGTCGACAACACGCCGCCCACCA 8880028 37 100.0 33 ..................................... TAGAGCGGCAGGCAGGGCACGTGGGCGCCTTGT 8879958 37 100.0 33 ..................................... GAATCGCAGGACGCGCAGGATGGCCCGTCCTCA 8879888 37 100.0 37 ..................................... AGTTCCGCCTCCGGCCAGCGAAAACGGACCTTGGAGA 8879814 37 100.0 33 ..................................... TAACATCCGCAGTAACTTCATCGTCTTCGACAT 8879744 37 100.0 33 ..................................... GCGTCCGCGTCAGAAGAAAGCCGCGTCTGCTCC 8879674 37 100.0 38 ..................................... ACATAACTGGCGTTGCCCGTGTACGTGCCCCCACCGCG 8879599 37 100.0 32 ..................................... CGGAAGGTGAACTGGCGGAAGACCCACATCAA 8879530 37 100.0 37 ..................................... TGCGCCAGGGCCACGCCCAAGAAGAGCCCCCAGTGCA 8879456 37 100.0 36 ..................................... CGGTAGTCGAGCTCCGCCTGACGTGCCTGCCAGTAC 8879383 37 100.0 35 ..................................... CCCGCCTCGACGAAGGGGTACGAGAATGCCGGCCG 8879311 37 100.0 34 ..................................... ATCGCAATCCGCTACAACGCGATCGAGGACCACG 8879240 37 100.0 35 ..................................... CCACGCCTTCACCGGCAGCCCCTCCAGATGCGGCG 8879168 37 100.0 34 ..................................... ACGTTCGGCCGCCCCTTGCGAGGGCCGGACTTGA 8879097 37 100.0 33 ..................................... TCGCAGGAGAGGATTGCGCCAACGGTGAGCATC 8879027 37 100.0 32 ..................................... GCGACGAAGGAGCCCACCAGGTTGTGCTCGCG 8878958 37 100.0 34 ..................................... CGCTTGGGACGGTGATGGGCAGGATCGATTCCAC 8878887 37 100.0 32 ..................................... CACTCAGTGGCGAACCCGAGACCGCCCGGCCA 8878818 37 100.0 33 ..................................... ATGAGCTGCCGAATCGCGAGCCCGGTTGCGTCC 8878748 37 100.0 33 ..................................... TCGGGGGGCGAGGATGCGGCGCCCTTCGGCTTG 8878678 37 100.0 32 ..................................... TTGAGCCAGTGGCGGATAGCGCGGGCTACGCG 8878609 37 100.0 33 ..................................... CAGCGCCCGCTCAATCATCTCATCGTCCGTTTG 8878539 37 100.0 32 ..................................... CAGCTTCCGCCGGAGCTGCGCCCGCCGGCAGA 8878470 37 100.0 33 ..................................... AAGCGCCGCATGGGCCAGCAGGTGGACGACGTC 8878400 37 100.0 32 ..................................... GGCGTGGGCGTCGGGGCGATGCGGGCGCGGGT 8878331 37 100.0 35 ..................................... TCCAGCAGGGCATCCACCACAGCGACCAGACCCGG 8878259 37 100.0 34 ..................................... ATGAGAGGGCGTCACGTTCTCGCTGCTCGGCTCG 8878188 37 100.0 33 ..................................... GAGGGCGGGCGAACACCTCGCGCTGCCTCGGCG 8878118 37 100.0 33 ..................................... CCGATGACGGACCGGGCCGCGTACGGGGACGTC 8878048 37 100.0 35 ..................................... GATTGGTGGATGACACCTGAGCCACGAGACGAGCG 8877976 37 100.0 34 ..................................... TCAGCCCGCGAGAGGAAGGCGAGCGCGTACATCT 8877905 37 100.0 34 ..................................... AAGAGAGCTGGCCCGCCGGTCGTGGTGCTGGGCA 8877834 37 100.0 35 ..................................... CTCGCGGCGCACCGGCGCAGCTCCGCGTTCATTCG 8877762 37 100.0 33 ..................................... CGAACTCGCGCATCCTGGGCGTCACCGCGACGC 8877692 37 100.0 34 ..................................... CCTCTCCCGTGCGGAAGGCAGCACATGGCTGAGA 8877621 37 100.0 34 ..................................... TCCGCCGCCATGGCATCCAGCGTCAGCTCCAGCT 8877550 37 100.0 33 ..................................... TCCCTGGCCATCAGCGCCTCCGCCGACGTGACT 8877480 37 100.0 35 ..................................... CCAGTAGCTGCGGGGCGTGTCGTTCATACAATGTC 8877408 37 100.0 34 ..................................... CCTGAGCGCGGCAGACGTCGCTGCAGCTTGGAAA 8877337 37 100.0 33 ..................................... CTGGCCGAGCGTACGAAGGTGGGCGGCCAGAAC 8877267 37 100.0 34 ..................................... CGGGCCTGGGTGGTGCGACGGTAGACGGCGGGGA 8877196 37 100.0 37 ..................................... TCCACCACCTTGCTTGGCGGAGTCGTCCAGACGTCCT 8877122 37 100.0 35 ..................................... CCTTCGACGACGCGGCCCTCGGTGCTCCAAGTCAC 8877050 37 100.0 33 ..................................... ACGTTGAAGCTCTTGTGCTTTGTGCCCACCGAC 8876980 37 100.0 32 ..................................... TACGACGCGGTGAGCGCCCACCTGCGCATCAA 8876911 37 100.0 35 ..................................... TCCCGGTAGGCGACGAGGACCTCACGGGTGCCGCG 8876839 37 100.0 32 ..................................... CCCATTTCCGCGCTGATACAGCTCGACACCTG 8876770 37 100.0 35 ..................................... TACGGAGTGAAGGACTTCACGGATACCGCCCAGAG 8876698 37 100.0 32 ..................................... CGCAGAAGCTAGACAGCACCCGAGCGCTCGTC 8876629 37 100.0 33 ..................................... AGCACCCTCCATTCTCGGCGCCCTCATTGAGCG 8876559 37 100.0 36 ..................................... GCCGGCTGGAGCCCGCCCGGGTGGCGGCATGAAGAA 8876486 37 100.0 32 ..................................... GAGCAGTGGCGGGGCAAGCTGGAGCTGCTGGG 8876417 37 100.0 37 ..................................... ACGAAGTCCAGGCCCATGTAGCGCGCGAGGTCGCGGC 8876343 37 100.0 32 ..................................... TTCTCGGGGGCGATGGGGGCGCCGCCTACGAT 8876274 37 100.0 33 ..................................... CCGCCCTGCACCCGTGAGCGCGGGAATCCCCAG 8876204 37 100.0 33 ..................................... CGGAAGTCGACGGCCACTTGGTACTGCGCGCGG 8876134 37 100.0 32 ..................................... CTCCCCCATGATCATGGCCCGGAGCCCCGGCG 8876065 37 100.0 34 ..................................... GGGATGATGGCGTCCTCGCGGACTGCCAGGAACT 8875994 37 100.0 35 ..................................... CCTTCGACGACGCGGCCCTCGGTGCTCCAAGTCAC 8875922 37 100.0 35 ..................................... AAGAGGCTCGTACAGCGCCAGTTCGCCCGTGCGAG 8875850 37 100.0 33 ..................................... TCGGCAATGGTCCGGAAAGCGGCGCAGCTAGTC 8875780 37 100.0 35 ..................................... CCGGCTTCCAAGCCCTCCTCGCCTAGTCATGTCCA 8875708 37 100.0 32 ..................................... TAAAGGGCCCTCGTGATGCTGGACGACGACGA 8875639 37 100.0 35 ..................................... GCGCTCGCGGCCCGGTGTGACTTGGACGGCATCCG 8875567 37 100.0 33 ..................................... GGCAAGCACCGAGTTGACCGTCGAAGCCGCTCT 8875497 37 100.0 33 ..................................... CGCGTTGAGCAGTACCGAGGCCTCTTGGAGCGC 8875427 37 100.0 34 ..................................... CGGCAACTCGACGGTGCCGCCCGATTCTCGCGCT 8875356 37 100.0 34 ..................................... ATCAAGAACCCGGTGCTGCTGTGGTGCCACGACA 8875285 37 97.3 35 .......T............................. CTCCAACGCATGCGGCCCAAGAAGCGCAAGCCGAA 8875213 37 100.0 34 ..................................... ACCGACGCCAGTCCCCTGCGCGACGGCCGCCCAG 8875142 37 100.0 35 ..................................... GCATGTCTATCTCCTACCACCGAAAGAGGCGCCCG 8875070 37 97.3 32 .....................A............... GCGTTGAGGTAGGCCTGCTGCATCCTGGAGAT 8875001 37 100.0 34 ..................................... TTGGCGCTCCGAGCCGCAAGCATGGCATCGGCCA 8874930 37 100.0 33 ..................................... CCTCCAGGCGGCACCCTCCAGGACGCCGGCCCA 8874860 37 100.0 33 ..................................... TCCTCGTGGTAGCGCGCAGTAGAGTCGTCGCCA 8874790 37 97.3 35 ...................A................. CTCTCGCACAACGCGAAGCGCGCGGACCCGGAGGC 8874718 37 97.3 36 ...................A................. CGGAGAAAGTCCGCGTAGACCTTTGCCGGCGTTGAA 8874645 37 94.6 32 ..T................A................. TTCTTCAAACAGTGGGGAGCGTGGGCGCCTCG 8874576 37 97.3 32 ...................A................. CTCTCGTGCGAGCCGCTCCTCGGGCCGGTGGT 8874507 37 97.3 37 ...................A................. ATCAACGTAGAGGGGGTGATGGTGGAGCAGCTGCGCC 8874433 37 97.3 34 ...................A................. CCGTGCGCGTCGCGTCCGCGCACCACCGCGTAGT 8874362 37 97.3 31 ...................A................. TGGGCCTTGTTGAGCATGGAGATTTGTCGTC 8874294 37 94.6 33 ...................A...A............. CCCAAGCGCAGGCAGCGCCGGGAAGGCCGCGCC 8874224 37 97.3 34 ...................A................. CCGTTTCGAGAATCACTCATGGCAGAGAACATCA 8874153 37 97.3 32 ...................A................. CCGAGCACCATCTGCGAGCAGCCATGGTCCAG 8874084 37 94.6 36 .C.................A................. TCGAACAGAGCCACGTCCTGTGTCCTCCGGTGTCGC 8874011 37 94.6 33 ...................A....A............ CACGCACAGAACAGAAGGTGCGCCCGGCGCGCG 8873941 37 97.3 35 ...................T................. CACGTGCACCGCGAGGTGGTGGCGAACCTCCGCAA 8873869 37 100.0 36 ..................................... TGCGCGGCCTCACGCGTGTTCCACTCGGCCTGGTCG 8873796 37 97.3 33 .................A................... CACACGTGCCTGCGGGCAGGCGCATCCGTCGTG 8873726 37 97.3 35 .................A................... GCCAGGGTCGGGCAAGACTCGTGGCCGGGGCTATG 8873654 37 97.3 37 .................A................... ATCTCCGTAGTTGGCCGAGCTGTGGACAACCTCTCGG 8873580 37 91.9 34 ..........A......A.........A......... GTTTACGGCACCTTCCACGAGTCCAGCCTGTACG 8873509 37 91.9 0 ...................A...........C....G | ========== ====== ====== ====== ===================================== ====================================== ================== 131 37 99.4 34 GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Left flank : CTCCCTTCGCGATGCGCTGATGCGTAGATTGACCGTGTTGATTTGTTACGACGTGCGGGTGTCGGACCCCCAGGGGCCTCGGCGCCTGCGCAAGATCGCGCGGGCTTGCAGAGACCATGGCGTGCGAGTGCAATACTCCGTCTTCGAGTGTGTCCTGGAGCCCAAGGACTGGGTCGTCCTGCGCGCCCGCCTGCTCGGCGCATTCGATTCGGAATGCGACAGCCTGCGCTTCTACTTCCTGTCGGAAGACGATGCCCGAAAGACGGAGCATCATGGCGCCAGGGCCCCCTTGGACGTCGAGGGGCCGCTGGTCCTGTAGGCCTCCGCGAACCGGCCCCGGTGTGCGCTCCGTCGAGGGTTCGCGCTCTTTGAAATCCCGAATAGAATCAGCGAGTTGGGTGAGTGGGGGCAGGAACGGCGGGGCGCTTTCGTGGCCGCGCAGGCCGGTTCGCGAAATTCGGCCGGATTCCGTAGTCAGAACGCTATGTTGGAGAGGCAGA # Right flank : CACCCAGAGCACTGGAGTCCCGGTGCCTCGTCCTGGTCACTCCTCATGAACGCGAGGACTTTCTCGCGCTTCAACTGGTCCGAAAATTGGGGAGCAGATCACGAGGACCCGCTCGTGCTCAGGGGCCAGAAGTCGCCGGGTATGCCCAATACACAGCACTTCTGGATCGAGGTCTTCGGGATGGCCGTTTCAAGCGCAACGGCTCGCTCCTATCCGACGTGAACGCGGCCGACGCGCATCGGCTCACGACGTTGCTCATCGCCGCGCGCCGGCTGGACGAATACAAGGAAGATCGCAGCGCCCCTCCTCCCTTTGTACATGCCCGGCAGGTGACGACGTCCGAATCCACCGTGGACGGCCAGCGCACGCGTCTGACGTTGGACATCGACACGCCGCCCGACACCCTCCGCGTCATGCAGCAGGTGGCTGCCGCTTACGGCATCGAACTGTGAGCGCGAGGACCCCGGGCGCCCCAGGGGTGGAGGAACACCTCCGTCTCC # Questionable array : NO Score: 6.23 # Score Detail : 1:0, 2:3, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCTCCTCGTGAACGCGGGGAGCGTGGGTTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [7,6] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTCGCTCCTCGTGACCGCGAGGAGCGTGGGTTGAAAC with 95% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-3.80,-9.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [17-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [36.7-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,5.28 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //