Array 1 64958-65946 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFXR010000048.1 Pseudomonas aeruginosa strain 12_6494 NODE_28_length_75984_cov_11.397182, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 64958 28 100.0 33 ............................ ACGTTGCCCCCATCCTGACCATCAACGGAGCAA 65019 28 100.0 32 ............................ GGTGACGCTGCACATCGTCGCCGCCGACTTCA 65079 28 100.0 32 ............................ AATCAGATCCCTCGCCGAGCGGCGCATCATTG 65139 28 100.0 32 ............................ AAACTCATCAGGCACCGGCAGCGCAATCAACT 65199 28 100.0 32 ............................ TGGCCGCTCGACCACGCCGGCATACTCACCGC 65259 28 100.0 32 ............................ TCAACAAACGCCACGGCGAACATGAACACGCT 65319 28 100.0 32 ............................ AGCCACTGGCATTCGAATGGGCCGGCCGGGAA 65379 28 100.0 32 ............................ TGGCGAAGGGCAGGGATGACAAGGGACAGCGT 65439 28 100.0 32 ............................ TTGTAGGGCGGCTGGGTATCGCTAACCATCAG 65499 28 100.0 32 ............................ ACCGCAATCCGTCAGTTCCAGTTCCGGGACAT 65559 28 100.0 32 ............................ ACCTCAAGCGGAAAGCAGATCGGCCGGACGTT 65619 28 100.0 32 ............................ TCGACGAAGCCGAGACGTTCACCAGCGCCCAT 65679 28 100.0 32 ............................ TACCACCAGGGATCGCCGTCGAACGGCGACTT 65739 28 100.0 32 ............................ TAACCGCGCCCTGGCGCATACACACACTGGAG 65799 28 100.0 32 ............................ AGGAACGCGACCAGGGCGCAGACGGCAACAAC 65859 28 92.9 32 .....................A..A... TGTCTCGAAGTTCATAAGCGGGCTTCGGGCGA 65919 28 75.0 0 T.........AC.....TC.TC...... | ========== ====== ====== ====== ============================ ================================= ================== 17 28 98.1 32 GTTCACTGCCGTATAGGCAGCTAAGAAA # Left flank : GAAGTCGTCGAGGACGAACCAGGCCTGGTCGTCGATCAGCAGCGCGCGCAGCAATCGCTGCTGTCGGAAGAAGTAGTGCGGGGCAAGCTGGGTATGGCCGTGCATAGGAGAAATCCTTCTCTGAGCTGTCCGCTGCCTGGCTTCTGCCGGCGCGGCAGGGAGACAGGCCGCTCGTGGGTGTTGGGCCAGCAGGCTGTGGCCTGCCGGGAACCGAAGTCGCCGGCGAAAAAAGCCTACTGACAGCGCCTGTAGGACGGCAATGGCTAAGCCTTGTACGAAGTCTCCGATGGCACAAGCCCGCTGAACAGCTAGGCCGTTCTGAACATTACGCCGGCATGGAGAAAACAGGGGATGGACGCTATGCTTGGGAACCCTTTTTTTGGTGGTTTTTTAAAGCCCTTTTAGATCAAAGGGTTAGAGATCGCTGCAAAAAGAGGGGTTTTTCCGGGCTTTGGCGCTGGAGCCCTTGGAGCTGGGAAGGTTGATGGTTTTTTGGTCTT # Right flank : ACGGCCAGCAGCCCTGAAGTATCGATTGATGCGGTTCGCTGTCGGCCGGGGTCACCAGTCGAAACGAAGTCCCTTTCCATGGGACTTCGTTGCGGACATGCCGATAAGGCGCTGACGGGGTTCTTCAGAACCAGGGAACGAAACCTCCTTTGCTCAACCCGTAACAGGTGAATCCTCCTTCCTCTGCCGTCACCTGCAACGGCCCGTGGCGGATGAAGAGACGGAAGTGCTGTCCGGTGCTCTGGCTGCGTAGCGTGACGAAGGGCAGGTCCAAGGCTCTCGCGACCGTATCGGGAATGCGTTTCCGAGCCTCCTCCTCACTCAGATCGTGCCGGCGCATGAGCCGCCGCCGCAGACGTTCCGGATTGCTTTTCACCTGAACCCGACTGACCTGACGGTACGGTGTGGGGTGAGGCACGACTGCCGGTTCTCCGAATTGCAGATGGTCCCGCAACCCTTCCAGCCAGGGCCGGGCGAGCAGGGCACGAAGGTCGTCCGCC # Questionable array : NO Score: 6.16 # Score Detail : 1:0, 2:3, 3:0, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTATAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: F [matched GTTCACTGCCGTATAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-8.00,-7.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [46.7-35.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], // Array 2 75458-74470 **** Predicted by CRISPRDetect 2.4 *** >NZ_JACFXR010000048.1 Pseudomonas aeruginosa strain 12_6494 NODE_28_length_75984_cov_11.397182, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 75457 28 100.0 32 ............................ AGATTCGTCCGCCCCAGCCGGCCAAGCTGAGA 75397 28 100.0 32 ............................ GACAGAAAGCGATCTGGATTCCGACCCATGCC 75337 28 100.0 32 ............................ CCACCGAAGAACCCTTCGAAGGCGCCCATGTC 75277 28 100.0 32 ............................ AATCACTTCAGTATCCAGGCCGTACCATTGCT 75217 28 100.0 32 ............................ GTCAGACGGGACAGATCAGCATCCGGCTCCTG 75157 28 100.0 32 ............................ TGCCGGCGGGAAGGTTGCCGGCTTCCCTGGCA 75097 28 100.0 32 ............................ TGGGCGCTGGCGATCGATGTTGATTGCGAGCC 75037 28 100.0 32 ............................ TGGACACCATCGATCCAGGCCAGCCACGTGCC 74977 28 100.0 32 ............................ CCGGACGCCCCTAATCTGGAGGGCTCCTGGCA 74917 28 96.4 32 ..A......................... TTTCCCCGCGAGGCATAGCAGGGATATCTTGT 74857 28 100.0 32 ............................ TACAAGCAGATCGGCGAGCTGAGCGGCAAGGA 74797 28 100.0 32 ............................ GTGTGTGCGGCCAGCTCGGACCCGAACTTGAT 74737 28 100.0 32 ............................ ACTGAAAGACTCAGAAATCGTGCACGCCTTCC 74677 28 100.0 32 ............................ GGCAATCGCCGCGTCGATATCTTCCGGGGTCA 74617 28 100.0 32 ............................ TCGTACTGGTCGAGATTTCCGATTCGGAAGCC 74557 28 100.0 32 ............................ TTCGACGCCGCTAGGGTTGCCGCATCGCCGTC 74497 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================ ================== 17 28 99.8 32 GTTCACTGCCGTGTAGGCAGCTAAGAAA # Left flank : GACATGTGTCCGCGTAGCGCCACCCTGTACGTAGACACCCATGCACTCCCCACGCACTTGTTCAACAACGCGAAAGTGCGCTTGAGGTCGGCGATCAACATCCTGGCCATGACCCGTTTGCTCGATGAGAAAGAAGAGCCCGGCGGCACCCTGGCCTACATCAACGGTGCGTTGCTGTCGCTGCTCAGCGATGCCTTGTCCGAAATCGAGGCGGGCCACCCGAGCCTGTAGCGCCGCTCCCTGGCGCGACGCCCCCGGCCTGGCCGGGGGCTTTGCGGCATCGCCATCACAAGACCTTTCGCGTCCGAACGGCACGCTTGATCGCCGTCCCGGTCCTCGCGAAACGGCCGCCAATTGCCCGAAGCTTCCGACCCTTTTTTCGGACGATTTCTTACGCCCTTATAAATCAGCAAGTTACGAGGCCTCGAAAAAAGAGGGTTTCTGGCGGGAAAAACTCGGTATTTCTTTTTCCTTCAAATGGTTATAGGTTTTCGGAGCTA # Right flank : CTCGAACCCACCTCGGCCACAACAGCCGCCGGGTTCGCTGCCGTCTAGGCAGAACCACCCTCCCCATCCCACTACCAAACATCCGAATATAAAGTTCCTACCCCGCCCGCCAGCCTCGCCCGTCCACGACAATGTGCCCCGCTTGGAAGCTCACGCTCCTCATACAGACGAAAACGGGGTAGCGGCAATCGGCCATATCCGCTAAACAGTTGCCTTGGCGCAGAATTCGATAGATCCGATAGGGACAGGCCACGGTCAACATGGACGACATTTCTCCCAGCGAACTGAAGACGATCCTTCACTCCAAGCGTGCCAACCTGTACTACCTGCAACACTGCCGCGTACTGGTCAACGGCGGGCGGGTCGAGTACGTCACCGACGAAGGCCGGCATTCGCACTACTGGAACATCCCCATCGCCAACACCACCAGCCTGTTGCTGGGCACCGGTACCTCCATTACCCAGGCAGCCATGCGCGAACTGGCCAGGGCCGGGGTATTG # Questionable array : NO Score: 6.25 # Score Detail : 1:0, 2:3, 3:0, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACTGCCGTGTAGGCAGCTAAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [6,8] Score: 0.37/0.37 # Reference repeat match prediction: R [matched GTTCACTGCCGTGTAGGCAGCTAAGAAA with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-7.70,-8.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: R [31.7-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,5.51 Confidence: HIGH] # Array family : I-F [Matched known repeat from this family], //