Array 1 19034-18339 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJIZ01000011.1 Bacillus pumilus strain MG52 NODE_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 19033 32 100.0 33 ................................ CCTGGTAAAGAATCCACAAATTCAATGAACTCT 18968 32 100.0 34 ................................ CATTCATAATCAACACATGCTGCGTGAACTCCCA 18902 32 100.0 35 ................................ TCCTCGTCATCCATTTCCGCACTATATAACCAAAT 18835 32 100.0 35 ................................ AATTTGAAAAAGACAAGGAAGCCGTAAAGAGTTAC 18768 32 100.0 34 ................................ TTAGTGTAATAACGATGACAGTCTTTCCATCCAA 18702 32 100.0 35 ................................ GTTTTTTGGCGTCTCAACCGTTGGTGCATCGGCGT 18635 32 100.0 35 ................................ TGGAATAGTCGTAAGTGAAACAAACGGATACCTGT 18568 32 100.0 33 ................................ TGCGCTTTACCTAAGTGGCCGAGTTTTTCGTTT 18503 32 100.0 34 ................................ GATGTTCCTGATCATTGTTCTAGCTCCTTTGTTT 18437 32 96.9 35 ............C................... GCCTTCCGAGTTTGTCGGGCTCGCTCATCATCAAC 18370 32 78.1 0 ............C.......A.A...CAC.G. | ========== ====== ====== ====== ================================ =================================== ================== 11 32 97.7 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GGCTTTTTGACCCGGATCATCGTCCGGAGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTGATTCACCTCATGGTCACAGCAATGACAGCACCGTCGCACTCTACATGAGTGCGTGGATTGAAATTATAACGGTAAAGGTTGACGCACCATATAACACGTCGCACTCTACATTAGTGGATGGATTAATAATTGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTAAATAAATAGATTTCAAACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTATATTTTTCAGGAGTGAAAACAAAATTCTATATAGAAAATTGAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCA # Right flank : GTCTTTGTTTTATACAAATTCAACTACCTATCCAGTTCAAAATCTACACAAAATGAATAATCAATAATGTACTTCCCCCCCTAAATCCAAGCTCTACACAACAAAAAAAGACTCGCTCACACAGAGCCGAGTCTTAATTTTTTTTGCAGTTTTTCTTCACTGAAAATCCAGCCGGTATAGGAATTTTTGATTTGGTGGTCCATGTCGATATGGCAGATCGCGACGAAAGGATAGTGACCTTTGCTGCGGTAGCGCAAATCAATGAACCGCACCTCATAATGATCCTTGTATTTATCCACTTCCCACCGGTAGACAGGGGAGAAGGAGAGAAAAGCTGAAATGTTTTCATCTTGTTTGGCAATTTTCATAATTTCTGTGTCAGGGACCGGCACACGGTTAAAGGTGTCTAAAATGACGACCTCTCCATTCATACTGCGCCCAACATGGAAAGAGGATTTACATTTCACGGCAATGCGCCATTGTCTGAACTTCATTGTAGG # Questionable array : NO Score: 9.15 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [73.3-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 19635-19339 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJIZ01000011.1 Bacillus pumilus strain MG52 NODE_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 19634 32 100.0 34 ................................ TTCATCTCACAATCAACAAAGGATGCTTTACATG 19568 32 100.0 34 ................................ AATGGCTTTTTGACCCGGATCATCGTCCGGAGCA 19502 32 100.0 34 ................................ TGATTCACCTCATGGTCACAGCAATGACAGCACC 19436 32 100.0 33 ................................ TATAACGGTAAAGGTTGACGCACCATATAACAC 19371 32 87.5 0 ..............T....GA......A.... | T [19342] ========== ====== ====== ====== ================================ ================================== ================== 5 32 97.5 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GCGTGGATTGAAATCCTCTCCTATTGCTTCGAAGTCTAGGTATCTGTTGTCGCACTCTACATGAGTGCGTGGATTGAAATAAATAGGTAGCTGTCACTCTCTTTTAGAGCGGTTAAGTCGCACTCTATATGAGTGCGTGGATTGAAATATTGATTCTCTATGTTCTGGTATTTCAATGGCGTCGCACTCTACATGAGTGTGTAGATTAATAATTACGAAAAACATAACTTTGCCTCTCAGTAGTCATGTACTTAATTAAATTCAAAGTTGTTGCTGAAATAATAAATATGATTATCAAGATTCAAATAGATTTCAGACTAGAAAAATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACTTAATTCCTATATAGAAACTTAAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCA # Right flank : TGCGAAAACATAACTCTGCCTCCTGCCTCAGTAGTCATGAATCTAATTGAATTCAATTGTTGCTGAAATATAAAGAAGTATGATTAACAAGTTTCAATAGATTTAAATAAATAGATTTCAAACTAAGAAAAAGTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTATTCATTCGACAAAAATGAGAAAAAATGTATATTTTTCAGGAGTGAAAACAAAATTCTATATAGAAAATTGAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATCCTGGTAAAGAATCCACAAATTCAATGAACTCTGTCGCACTCTACATGAGTGCGTGGATTGAAATCATTCATAATCAACACATGCTGCGTGAACTCCCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTCCTCGTCATCCATTTCCGCACTATATAACCA # Questionable array : NO Score: 8.94 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:54.55%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [61.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 3 20418-19922 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJIZ01000011.1 Bacillus pumilus strain MG52 NODE_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ==================================== ================== 20417 32 100.0 33 ................................ AATCCAGCTTTAATTAGATAATTAACTCTTCTA 20352 32 100.0 35 ................................ CGACCAAATCTATACAGGTCATGAACCACAAGCAC 20285 32 100.0 35 ................................ TTTCTCTATCTTCTTAAAGGTTTTCCAGTCATAAC 20218 32 100.0 34 ................................ AGTTAGGTTCAAACTATGTAAGAACGTTACCAGT 20152 32 100.0 34 ................................ CCTCTCCTATTGCTTCGAAGTCTAGGTATCTGTT 20086 32 100.0 36 ................................ AAATAGGTAGCTGTCACTCTCTTTTAGAGCGGTTAA 20018 32 96.9 32 ...........T.................... ATTGATTCTCTATGTTCTGGTATTTCAATGGC 19954 32 90.6 0 ...................T..A....A.... | T [19925] ========== ====== ====== ====== ================================ ==================================== ================== 8 32 98.4 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : GCCTGAGACGGTAGGAGAAGCATTCAAAGTAGATGTCATGACCCCACATCATTCAGACTATAACAGCGTCAAGCTAGATAAGATAAACAAAGGGGGAAGTGTTCCAGCCCCTCGAGACGATGACTCACCAACACCGATTCATTTCTTAACGGTGGTCAACGGCCGCTTTCAACTTCTATTGAAAACAAAAAAGAATCTACCAGAAGAAGCAGAATGGCTCGAACTCGCCAAAACCATCTTACTAGGCGCTTTAGAACACGAAGGAATCGGCGCTAAAACAAATGCGGGTTATGGAAGGCTTAAAATGGACCACGTCATTTCGTAAGACTAAGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCGTTTTATTCGACAAAAATGAGAAAAAATGTATATTTTTTAAGGGTTAAAACAAAATTCTATATAGAAACTTAAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGGAAATCGCA # Right flank : TACGAAAAACATAACTTTGCCTCTCAGTAGTCATGTACTTAATTAAATTCAAAGTTGTTGCTGAAATAATAAATATGATTATCAAGATTCAAATAGATTTCAGACTAGAAAAATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGAACATTCGCACCTTTTCATTCGACAAAAATGAGAAAAAATGTATATTTTTTAGGGGTGAAAACTTAATTCCTATATAGAAACTTAAGGGTTTTGACGATCATTCCCTAAAAAATGTTATAATTAGGGCGAAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTTCATCTCACAATCAACAAAGGATGCTTTACATGGTCGCACTCTACATGAGTGCGTGGATTGAAATAATGGCTTTTTGACCCGGATCATCGTCCGGAGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTGATTCACCTCATGGTCACAGCAATGACAGCACCGTCGCACTCTACATG # Questionable array : NO Score: 9.18 # Score Detail : 1:0, 2:3, 3:3, 4:0.92, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [5-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [70.0-65.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 4 28380-28080 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJIZ01000011.1 Bacillus pumilus strain MG52 NODE_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 28379 32 100.0 34 ................................ TAAAATCTCCGATGTTGTAGATGCTGAACGTTTT 28313 32 96.9 33 ....................A........... TCCACAGCTTATACACAGCCTCGTAACGTGTAT 28248 32 93.8 35 .....G.......C.................. AAAGACGAAGAAAGAATCACCATCATCGAGCGAAT 28181 32 100.0 34 ................................ ATGCAGTGACCTCCTGAATGTATGATGAATTGTT 28115 32 84.4 0 .......C...T............T..TC... | AC,G,A [28091,28097,28106] ========== ====== ====== ====== ================================ =================================== ================== 5 32 95.0 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : CGCACTCTACATGAGTGCGTGGATTGAAATCAAAATAATCTCTCCTTAAATGGTTGTTTTAATGTCGCACTCTACATGAGTGTGTGGATTGAAATACAGTAGCCGTATTAATTACAGGTCTTATATTTGTCGCACTCTATATGAATGTGAGGAATAAAATTCTTGTCAGTAGGTAGCTTGAAAGATTTATTGACATTGCGCTTGAAATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGATGTTGATGAAGCAGCGAAATAAGCATGATTATCATCAGTAATAGTTTTTAATTAAATAGGATTAAGAGAGATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCATTCGCACCTTTTTATTCGACAAAATTGAGAAATGTATATTATTTAGAGGTGAAAACAAAATTCCATATAGAAATTGAGGGTTTTGGCTATCATTTCCTAAAAAATGTTATAATTAGGGCAGAAATCGCA # Right flank : GATTGTGTCTTAAACGGTTATGACTACCTTAAAGATCATCTTCTTACAACACCCTCTTTCAAATACAAAAGCCATCAAATATACCGTTCATTTGAATAGTGAAAACATGACTCCTTGCAGTCATGTTTTTTTCTTCTTCTTTTTCCTAAAAAAACCTTAAAAAATCTCAAAATAAGTCGAAATGAAAAGTAGTCATTTAGATTCAAATTTTATCCATTCGTAATGAATGATGAAGGAGGAATTGGTTTGGGTGAAACGGAGCGAACCGGTAAAGTGGAGCAGCTGATCTTAGAGAATTATCAAAGATTAAACAGCATGATATCAGAAGAAGTGGACTTTGCTTCTAACCATGGCGGGCTGACAGGGGATTCTAGAGAAGTGATGTGGCTGGAGTTTTTTCGGAAAATCATCCCTAAAAAATATTCATTAGCACAAGGTGTCATCATTATTGACTCAGATGGAAATCATTCTAACGAAGTCGATATTGCCGTATTTGATGA # Questionable array : NO Score: 8.75 # Score Detail : 1:0, 2:3, 3:3, 4:0.89, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [2-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [55.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,10.05 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 5 29274-28720 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJIZ01000011.1 Bacillus pumilus strain MG52 NODE_11, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ ================================== ================== 29273 32 100.0 33 ................................ GAATCAACAATTGCCTATGCAATGAGTGTTAAC 29208 32 100.0 33 ................................ CCCTCATAGAGACTGACGTCTATTTTCGCTGTG 29143 32 100.0 34 ................................ ACAATTTCTGAGACAAATAATCTCTGATACAAAA 29077 32 100.0 34 ................................ ATAACAATGTCTTCAGGAATTACAAACCTTTTAC 29011 32 100.0 32 ................................ CTCATCAAGATTTTTACCGAGTAGATTTTCAC 28947 32 100.0 34 ................................ AAGCTGAACAGGCTGAAGGTATAGATAAATCAAA 28881 32 100.0 33 ................................ CAAAATAATCTCTCCTTAAATGGTTGTTTTAAT 28816 32 96.9 33 ...................T............ ACAGTAGCCGTATTAATTACAGGTCTTATATTT 28751 32 81.2 0 ...........T....A..T.A...A.A.... | ========== ====== ====== ====== ================================ ================================== ================== 9 32 97.6 33 GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Left flank : ATGAAAGAAATAGCCGATCGGCTAGGCGAAACGAGACAAAACATCTCAAACATTCACAAAAAAGCGCTCAACAAACTAAAAGAAGAAACAGGGGGAGATGTCCGTGAACGAAGAAAAAATGACCAATGGGGAAATGGAAGAACTCATTGAAACCTTCACACCCATGATCAAAAAGAAACTACAAAACACGGCATATCAAGAAAGAGAAGACCTCGAACAAGAACTCTATATCAAACTCATCGAAAAAGTAGACCGGCTGATTTACCAAGAGGGACCTGGCTTTTGGGAGTTTATTGTGGAATATACGACGAAGATGTAAGAGGAACTGATGGTGCGAATGTCAGGTGAACATAAAATTCCTGGAACATTCGCACCTTTTTATTCGACAAAATTGAGAAAAAATGTATATTTTATAAAGGGGAAAACAAAATTCTTTATTGAAAGTTGTGGATTTTGCCTATCATTTCCTAAAAAATGTTACAATTAGGGCAGAAATCGCA # Right flank : TCTTGTCAGTAGGTAGCTTGAAAGATTTATTGACATTGCGCTTGAAATAGGTGTGAAAAACATAACTCTGTCTCAGCCATTTTATTAATGAATTCAAAGATGTTGATGAAGCAGCGAAATAAGCATGATTATCATCAGTAATAGTTTTTAATTAAATAGGATTAAGAGAGATTCGGTGCGAATGTGAGGTGAACATAAAATCCCTGGGGCATTCGCACCTTTTTATTCGACAAAATTGAGAAATGTATATTATTTAGAGGTGAAAACAAAATTCCATATAGAAATTGAGGGTTTTGGCTATCATTTCCTAAAAAATGTTATAATTAGGGCAGAAATCGCAGTCGCACTCTACATGAGTGCGTGGATTGAAATTAAAATCTCCGATGTTGTAGATGCTGAACGTTTTGTCGCACTCTACATGAGTGCATGGATTGAAATTCCACAGCTTATACACAGCCTCGTAACGTGTATGTCGCGCTCTACACGAGTGCGTGGATTGA # Questionable array : NO Score: 9.14 # Score Detail : 1:0, 2:3, 3:3, 4:0.88, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAT # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.12%AT] # Reference repeat match prediction: R [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [-2.60,-4.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [7-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [65.0-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0,9.78 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 1 226339-226568 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJIZ01000003.1 Bacillus pumilus strain MG52 NODE_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 226339 32 100.0 35 ................................ ATGTGTACAGGTACGCATAGTTCAGGTAAATTCGC 226406 32 100.0 33 ................................ CAACCACTCCATACGTTATTGTTAAGGTAATTT 226471 32 100.0 34 ................................ CTAGTAAATATCATCAATCTCAAAGATGAATTCA 226537 32 100.0 0 ................................ | ========== ====== ====== ====== ================================ =================================== ================== 4 32 100.0 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAG # Left flank : GGTTCACACCGACTCACTTTAGACCGCCATATGGAGGGACAAACGGGCAAATTAACGCGGCTGTCAACATGAAAGTCACGCTTTGGGACGTAGATCCTGAAGACTGGAAATATCGCAACAGCCAGTACGTCGCGAGCTACATTCTCACACATGCGTCTAGCGGAGAAACCGTCTTAATGCACGACATCTATGACACCTCGGCAAATGCAGCTGTCACGATTATCAAGGAATTAACCAAACAAGGATATCAATTATTAACAGTTTCAGAGCTTGAGCAGTGGAAGGAAGCGCGGGCGAAGAAAATCAAACATAATAAATGATCATAAATATGGTGCGAACCCTAGGTGAACATAAAAAGCCTAGAGGATTCGCACCATTATTTTCGACAAAAAACATTCATAATTTTACAATTTATTTATTTTTTCATTAGAAATCATAAATTTAAAAAGAATAATATATAAAATAATGAATAAAATGGTATAATTTACATTGAATAAGCA # Right flank : GACCTTTATTATTCCTCTTTCCACACGAATCTTTGTCGCACTCTACAGTTCAAGTGTTTTTAAACGGTCTTATACAGAAGCAGAAGCGTAAAAATCAATCAAGGAGTTAAGTATGAACTATATCGCACATGTGAGAAAAGAAGACGGCGCTATTCAAACCGTTTCCGATCATTTATTAGAAGTGAAGGCATTATGTGAGAGGTTTGGAGATAAGCTAGGGATTCGCCATATAGCTGGATTGGCAGGAGTCCTGCACGATTTAGGGAAATACTCCAAGGAGTTTCAGGATTATATTCGTGAAGCAGTTGATTCTCCTGATCACCCTCCGCAGAGAGGACGTGTCGATCATTCAACCGCAGGGGGGCGAATGTTGTACAACATGTTTCATGGTCCACCACACAATCGCTATTATACTCTTTTGGTGGAAATTGTATCTAACTCAGTGATTTCTCATCATTCGGATTTGCAAGATTTTTTAAATCAAAAGGCAGACTCGCCTT # Questionable array : NO Score: 8.86 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [86.7-63.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [9.64,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], // Array 2 234816-235441 **** Predicted by CRISPRDetect 2.4 *** >NZ_QJIZ01000003.1 Bacillus pumilus strain MG52 NODE_3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ================================ =================================== ================== 234816 32 100.0 34 ................................ GTATATACTGTATTTGGAGGTGGCGCACATGTGG 234882 32 100.0 33 ................................ AAATAGGTTCCTCATTGCTTTCATGCTAGTCTG 234947 32 100.0 33 ................................ TGTAGCACATTATCATTCGGCAACCCATAAATT 235012 32 100.0 34 ................................ ATGAAAACGAAATGTTTGATGAAAAGGGTGTGTT 235078 32 100.0 35 ................................ TAGCCTGAAAATACCAAATGCGAAGCTATTAAGTT 235145 32 100.0 35 ................................ AACAAGGTTAGGGAATGTTGCTGCTAACTGTTGTG 235212 32 100.0 33 ................................ TTCAAGACGTTTGATGTAAGCACGTATATAATC 235277 32 100.0 34 ................................ AATCATTGTGTCGTTTATATCTTTTGTCAGGAAC 235343 32 93.8 34 ..............A.....A........... AACCACGGTTTCCCAACCGTTGTCACCATCGACA 235409 32 93.8 0 ....................A..........T | G [235436] ========== ====== ====== ====== ================================ =================================== ================== 10 32 98.8 34 GTCGCACTCTACATGAGTGCGTGGATTGAAAG # Left flank : CCATTTCTTTGGAAGTAGGTGATGTTTTTTATGATGGTTGTAGTTACATATGATGTCAGTACAATTGATAGAGATGGGCAACGGAGACTAAGAAAAATATCGAAAATTTGTCAAAACTATGGTCAAAGAGTACAACATTCTGTATTTGAATGTATTGTAGATTCAACGGAATTTGCTATATTGAAGAATCAGTTGTTGCAAGCTATTAATGAAGAAAAAGATAGTATTCGATTTTACCAAATTGGTAACCAATATCGAAAAAAAGTAGAACAGGTTGGTGCAAAGGAAACAATTTTTGTAGAAGATCCTTTTATTTTTTAGGTGCGAATGTGAGGTGCACATAAATTCCCTGAAGCATTCGCACCTAAAAAGAAAGATTTTTCGACAAACACTATCACTTTGTGCCTCAATAATTTATACTTTTTATAAAAAGAAGAGTCTTTTTTATCTGATTTTCATAAAAAAAGCTGTTTTATTTGTTTTTTTTACTGAAAATCGCA # Right flank : TTAATGGTTTCTTTGACATGATCATCATTCAACAGTCGCATTCTAAAGGGACTGACCCCATGAGATGAGACAAATAAAAAACACCTTCAAGTTTGCAAATGGATCATTGTGATCCGAAATTAAACATGGAGGTGTTTTTTCTATGAGGACAAGAGTGAGTTATCCGGTTGAAGTCAAACAGAAGGTTGTAGAAATGAGATTGGCAGGCGTGCCTATGAAAGAGATCATACAGAAATTGAATATCAAGAATAAGACGCAGGTTCAGACATGGATGAGGTGGCATAAGGCTAGGGAAACACACCGGTTTGAACAGCCTGTTGGAAAATAACATACCTATGGAAAAGGTCCCGGGTACTCTTCAGAATTAGAGAGAATGCAGGTGGGACGATATCTGAGTCAACAAGTTGTGGCCTCAAATATGCTGAAGAATGCAGTTTTGTTTCCTTATCCATGATCAAGTATTCAGATTACAGTATAATGAATGGATTGAAATAACAGTT # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCGCACTCTACATGAGTGCGTGGATTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [8,8] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTCGCACTCTACATGAGTGCGTGGATTGAAAT with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-4.00,-2.60] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-5] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-60.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [10.05,0 Confidence: HIGH] # Array family : I-C [Matched known repeat from this family], //