Array 1 289029-289595 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEXX01000003.1 Acinetobacter populi strain PBJ7 Contig3, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 289029 28 100.0 32 ............................ TTTGCAGTCGTGATATTCAACATTGCGCAAAG 289089 28 100.0 32 ............................ ACCTACACATTGGCAACCACTACCAGAGCCAC 289149 28 100.0 32 ............................ CATTTTTTTATCGGGGTGATTAATGAGTAATT 289209 28 100.0 32 ............................ TCAATACTTAATAGAAACATGTGGAATTTGAT 289269 28 100.0 32 ............................ GAAAAACGGCTAGCAGATTTGCAAAAAGATAT 289329 28 100.0 32 ............................ TACTGCAAACAGATCCGCATAAGCTTCACGCC 289389 28 100.0 32 ............................ AGTCTCGCCCCAAATCGGTTGAGTTGTATTAT 289449 28 100.0 32 ............................ CTGCGCTAACAAGTGTAGTGAATATAAAAATG 289509 28 100.0 32 ............................ TATTGGTGCAATTTCCAGCAATGCTTTGATTT 289569 27 92.9 0 ........................-.T. | ========== ====== ====== ====== ============================ ================================ ================== 10 28 99.3 32 GGTTAATGCCGCATAGGCAGCTTAGAAA # Left flank : TGGAATTTATGCAATTGCAAAATCCACATTCGCCATTGACTGCATTACTGGGTAAATTGCCTTTGAATAAAGTCCAATCTCACCTTATGCCATTACAATCGTTGCAATATATTCTCTGGTATCTGCACACCTATCTTGAACATGATGAAGACTATCGTGATGCCATTGCAAGCCTAGATAAACCCACACATTTTATTATTGGGAAACAATCTTCTTTATATGGGTATCATGGACAACTGGAAATTGCCCAACAACTCGATGATGCAACCATTCATCTTATGGACAAATCCGGACATGTGCCATTAATGTCAGAACCAGTGAAATTTGGTAAAATTTTAAATGAATTTTTACGTGCCTCATGACCCTAAAAACCCAATTTTTTTAACACTCATTTATATCTTGTTTAATCAAAACCTTAGAGCCAAAGTTTAAGACTTTGGTATTTTATCAATTTTTGCCCTAATACTTTAAAATTGCTTAGCTTTTTTTAAAAATTTTAA # Right flank : ATTATTTAAAATGATACTGCTGCATCCATGTATCAATCAATGCTACAGTTTGTGGCATAAACTGTCCCATGTCATACATATGGTCCGAACCTTTTAACTCAATATAGGTGGCGTTTTTATATTTTTTTGCTGTGGCTTTGGCTATTTTTGCCACCACAATTTTATCATCCGTTCCGGAAATCACCAGTACTGGGGTTTGAATTGCATCGGTATCAACAGTTGCTGCTTTTTTTCGATCCAGAAACCAAAATGCCATTTCGGCATAGACACGTCCGGATTCTGCCACCAAACTACGATAAAATTGCTGACGTAAATGTTCCGGCTGATGATTCATGCAATACTTAAAGACTCGATCTTCAGTAGGAAACAAAGGCTTTTTCCAGAAACCCCATTGTAAATAATGCCGGTAAAATGCTGCCAACATCGTGGGATATAATGCAAAAATACCTGCCATCGGTGCAGGTCCCAATAATACAACGCCCTTATGCCGATCCGGATGT # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GGTTAATGCCGCATAGGCAGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.70,-7.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-2] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-68.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0.37 Confidence: LOW] # Array family : NA // Array 1 199498-201806 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEXX01000001.1 Acinetobacter populi strain PBJ7 Contig1, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================= ================== 199498 28 100.0 32 ............................ GTGATGACGTTTTGGGATTTAGGTGTTTCGGA 199558 28 100.0 32 ............................ AATCAATCCATCAGGGCTATAACCAAATTTTT 199618 28 100.0 32 ............................ AAGCTACCAAAGTTCCAATCGCAAATTCTGTA 199678 28 100.0 32 ............................ ATCAACTGGTGACTATGGCGCAGCATCATCAA 199738 28 100.0 32 ............................ GGGTGAGCAAGAAATCTATTCTATTGATGAAT 199798 28 100.0 32 ............................ TAAAGATAACTATTCAGGTTTTCATACAGAGC 199858 28 100.0 32 ............................ ATTCGGAAAGCATTCGATGTCCTCGCATACCG 199918 28 100.0 32 ............................ AAAAAAATCTTCCTTGGACATTGTTGGCTTTT 199978 28 100.0 32 ............................ TTTTTTGCAAGAAGCCAGAAAAAAGAAGAAAG 200038 28 100.0 32 ............................ TAAAGTGCATTTTTTCATGAAGTTGCCTCGCT 200098 28 100.0 32 ............................ GATGATTGATCCCCATACCTTCATAGTATCTG 200158 28 100.0 32 ............................ ACAGCATAATTACAGTTGTTACGATGTGCGAA 200218 28 100.0 32 ............................ TACATTCAACGTGCTGGCGAACAGCTCACTAC 200278 28 100.0 32 ............................ TTTTGGCCTAATGATATTGAGCGATTACCAGT 200338 28 100.0 32 ............................ ATCCAAGTCTACAACGATAGTGTGCACATCTT 200398 28 100.0 32 ............................ ATGGTGCGTGCTGTATCTGTTTGCCATAATGC 200458 28 100.0 32 ............................ AGTCTTCTAAGCGGCGTCGCTGTATATACATC 200518 28 100.0 32 ............................ CTTGATGGACGCATAGGATTGTCGCCAATCTC 200578 28 100.0 32 ............................ TTGAACACATTACAGTGATGCGGTTTTGAATA 200638 28 100.0 32 ............................ TATGCTGCCGACATCGCGGCATGGGAGCAGGC 200698 28 100.0 32 ............................ AGTCTACTTCTGGGTTACCTGTTGGGGTGAAT 200758 28 100.0 32 ............................ TTAAAAGAAAAACAACAGATGTCTCTATCAAT 200818 28 100.0 32 ............................ TGTTTTGTCCGCATTTCCGAAAAACGTGTGCG 200878 28 100.0 32 ............................ GATAATAGAGCGTACTGGGGCGGATTGGCACA 200938 28 100.0 32 ............................ ATACCTGTTAGCGGATAGTTCACGCTCATTTA 200998 28 100.0 32 ............................ ATTTCATCAGTCATTAAAGTGTATTGCTGGAT 201058 28 100.0 32 ............................ ACAACATAACTACAGTTGTTATGATGTGCGAA 201118 28 96.4 32 ....................T....... CATCGGGGCAAGTTATACAGATCGAAGTTTAG 201178 28 100.0 32 ............................ ACGTCCGCCATTGTCACGCTGCAACACGTCAA 201238 28 100.0 32 ............................ GATTGCGTTCGATTAAATGTTTTGCTGAATAA 201298 28 100.0 33 ............................ ATCTATATACACGTGCGTATGCGTTGCTATATA 201359 28 100.0 32 ............................ AGCTTGAAGCCCCCATGCGATACGTGAATTTT 201419 28 100.0 32 ............................ ATGCCAGCTTATATTTTTTTCTTGACAGTATT 201479 28 100.0 32 ............................ CATGCAAAGCCATTGCTTACACTTAAATATGC 201539 28 100.0 32 ............................ AAAGATCATAAGCTGTTGCAAAATTTTCTTTG 201599 28 100.0 32 ............................ TTCATTGAACCATTTTTGTGCCTTGGTCTGTT 201659 28 100.0 32 ............................ CTTCACACTATTAACAACATGGTTGTATGCCT 201719 28 100.0 32 ............................ TAAACCATATCGTATTTCGCACAGAATGCCCC 201779 28 100.0 0 ............................ | ========== ====== ====== ====== ============================ ================================= ================== 39 28 99.9 32 GTTCACGGTGGCATACACCGCTTAGAAA # Left flank : TGATACAGCTTAATCTCAATAAATGGCTTGATCGTTTAACAGATTATGTACATACCACAAGCCCAAGAGAAGTCCCACAAGGGAAAATCACAGGATATGCGTGTTACTTTAAAGCAAATCCTAAATTGACGATTGAACAACGGATTGTGCATCAGGCAGCTCGAAGGAATATTTCATTAAATGAAGCAGAATCCCATTTTAAAGATTTAATCCAACAGCCTAATGCTGAACCTTATATCAATTTAAAGAGTTTAAGCCATGATAGAAAGTTTAGACTTTATATCGGGAAAACCCTCGCTGATGAAGCGAATAATAAAAAATTTGGGACATATGGACTCAGCCGAACAGCGACAGTTCCTGAGTTTTAACCCAATATTTTTTTGATCTCTTTAACAGCTTAATAAAATCAATAAGTTATAACTTTGCTTAAAACTTTGGGTATTTATTACTTTTTAGAGTTAAAGCACTGTTATAACTTTATTTTTTGCTTTATGATTACA # Right flank : ACCTTAAAAATTCTTTACTCTACCGCATAGGTCGCTTAAAAAGATATAAAACCTCATCAAGACAGCCTATAGTCCTTAAAATCATCGGCTGTCTTGATGTTATCAAACAAAAATTACTTAATACTTAAAGTTTCATGCTTACCCCAATTTGAAATCCACGCCCGGGAAGTGGTGCAATATATTTTAATGGTGAATTTTGTGGTCGAGCATCTTCATCTAACAAATTTGAACCATTTAAAAATACATCAAAATCTGCATTATGTAGTTTTAAATGTTTACGAATTTGTAGATCAACCATATTATATGCAGGTAAAGGAATTTCCTGAGATACATTTTTACCCAGATACTGAGGTTTATCATAATAAATACTGGATAATCGGGCCGACCAATCATTTTTCTCCCATTCAATATTTGCCCCATAACGGTTGGTTGGCATATTCGGCAAATAATTGCCGTCATTAAACAGGCTATATTCATTCGGATTCAGGTTCTTGTTTTTG # Questionable array : NO Score: 3.26 # Score Detail : 1:0, 2:0, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACGGTGGCATACACCGCTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [8,6] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.30,-6.40] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [80.0-66.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.42,0 Confidence: HIGH] # Array family : NA // Array 1 190271-191797 **** Predicted by CRISPRDetect 2.4 *** >NZ_NEXX01000007.1 Acinetobacter populi strain PBJ7 Contig7, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================ ================================ ================== 190271 28 100.0 32 ............................ TCCACAAATTCACCATCTTCATCTAGTGTGTA 190331 28 100.0 32 ............................ ATGAAGCAATTCACCGGACAACGCCAAAAGCT 190391 28 100.0 32 ............................ TAACATCTTTTTCCAAGCCGTTGGGGTTGTTG 190451 28 100.0 32 ............................ GCTTATTCGGTACCACGGTGGCAAATTCCGTA 190511 28 100.0 32 ............................ GAAAAGCCAAGTATCATCTAACATTTGAAATA 190571 28 100.0 32 ............................ AAAGCATAGTCAGTCGTTGTTCTGGGACATGA 190631 28 100.0 32 ............................ ATGGGTGAGTATCAATATCCCATGTGCATTTT 190691 28 100.0 32 ............................ ATTTAAATACATTTACCTTGCCAACAACGCTT 190751 28 100.0 32 ............................ ATTACCACGAGTTCCGCAAAACAATGTTTCAT 190811 28 100.0 32 ............................ TGTGTTCCCGTGCGGAGCAGAACGAAATACTT 190871 28 96.4 32 ...............T............ TGTTTACACACTAATTGCATCACTCGGAAGTA 190931 28 96.4 32 .......A.................... TGTTAGCAACAATCATACAGGCAAAGAAAAAG 190991 28 100.0 32 ............................ TTTTAGTTCCAACCAATATGACAACGGCAGAG 191051 28 100.0 32 ............................ ACAGACCTTTAAATTATTAATATTGCAATAAT 191111 28 100.0 32 ............................ TAAGGCTTTGATGGTAGCAACTATCAATACTT 191171 28 100.0 32 ............................ TGAATAATTGTCCCATCCAAATATTTTTGAAC 191231 28 100.0 32 ............................ TAAATTTGAACATGCTGAAACAGCTTTGTTAA 191291 28 100.0 32 ............................ TTGACACGAAACGAGCACATCATGATCTCAAA 191351 28 100.0 32 ............................ GGGCAAGTCAAACGAACTGGTACAAGCGGTAA 191411 28 100.0 32 ............................ TGACTTTTGACCTGCTGTTCTGCTTTTGCTGC 191471 28 96.4 32 ...................G........ AAGACCGTCAATATTTTTAGTTTCAAATGCAC 191531 28 100.0 32 ............................ GTTTTAGAAGTGATATCATCAAAAAGGGCCCA 191591 28 100.0 32 ............................ ATCGTATTGAACACAACCAGCAAATTGAGGCA 191651 28 100.0 32 ............................ ATTATTGATTACAGATGTCCGTGATGGAATAA 191711 28 96.4 32 ...................G........ ATGTTTGATTGTGCGATGTACAACTTTTTTAT 191771 27 92.9 0 ...................G....-... | ========== ====== ====== ====== ============================ ================================ ================== 26 28 99.2 32 GTTCACGGTGGCATACACCACTTAGAAA # Left flank : GTGAAAGCTTCCGTTTTAGAACGGGAGTTTAATTTACGTTATTCTGGAAAACCCATCACGCTTCAAGGGGTAAGAAAATGGCTGATAGGTGAAGCTATTCCACCTGCGGATAAATTACTCACGCTTGCCAAATGGCTCAACCTTCCACCCGAAGAACTTGCTTTTGATAAAGATATCCAAAAAGCAATTCAACAACGAGAAGCCCACTGGCAAGAAGAAATTGGTTATAGAGATAAAGAAATCTTTGATGCTTTTATCAAGCTTCCTGCTTCACAAAAGAAAATTGTTCGAGAAGTGATTGTGGCATTTGCCAAAGCATATCAAACTAAAGATGACTAACTTTTATTCCTAGATCATTCTGTTAAAATAACCCAATATATTTTCACTCTTTAATAGCCCAATACAATCAACAAGTTAAAAATAATTCCAAAATCTTTGGTATTGTAAGTATTTTGGTGATAACTTGTTGTTATTCATTTTAATTTTTACTTTATTTTTAT # Right flank : ATTTAAATCAAACAACATTATCTAAAATATTTTGCTCACCATGCCCTTTAAACTTTAGGGTTCAAGGGTGATGAACATTTTTTATATGATTGGAATATCAACAATCCCCTGCCAAAATAAAAAAGTGCCACATCAGGGCACTTTTTTGAGCATCTCTATTAACTTTGTTCTAAAGTCATGCCTGCATCGCGTGCAGCTCGAGTTCCTCCCATTAAAATCACATACTCACGCTGCTCATCAATCTGATTTAACTGTTCTGCCGCTCGAGGTGCCTTGCTTCCTCCGCCACATAGAATATAAATTGTGGCATCAGTCGGCACTTGCTGTAAATTACTTTCGTTTAAGGTATCAATCGGACAATTGATTGCACCTTGAATATGTCCTTCGGCATAAGATTTTGGATCTCGTACATCCCAAATAACAGCACCTTCGGGAAATTCAAAGGTGGTGATTTCTTGCTTGCGGATCATTCTGCACTCCTTTGATCAAAACAGCACTTG # Questionable array : NO Score: 3.22 # Score Detail : 1:0, 2:0, 3:0, 4:0.96, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTCACGGTGGCATACACCACTTAGAAA # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:53.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: NA [-5.90,-5.80] Score: 0/0.37 # Array degeneracy analysis prediction: F [0-4] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [83.3-71.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.68,0 Confidence: HIGH] # Array family : NA //