Array 1 46339-48073 **** Predicted by CRISPRDetect 2.4 *** >NZ_STES01000016.1 Klebsiella pneumoniae subsp. pneumoniae strain SIKP173 N5_NODE_16, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================= ================== 46339 29 100.0 32 ............................. GAGCAGGCACCCGCCGCAACGACGAAGAGCGC 46400 29 100.0 32 ............................. AAATCAGCCAGCACCACGATTCTGGGAAATTT 46461 29 100.0 32 ............................. ACAGGCTTACCCGTATTGAGACGGTTGCTGAA 46522 29 100.0 33 ............................. GAAACCCCATCAGATGACCCTCCCCATGTTGGC 46584 29 100.0 32 ............................. TTGCCTGGTCTGCTTGGTGATGATCCGTGGTA 46645 29 100.0 32 ............................. TACAGAACGACTGAGGCGGCGTGTATTGCATA 46706 29 100.0 32 ............................. GATCTTAACTCTATTGCCAATGGCGCAATTCA 46767 29 100.0 32 ............................. GGCGATGCGCGCTCTGCTGGCTATCGGTAAAA 46828 29 100.0 32 ............................. AATGCAGCAACCGGCAAATATATCGCCGGTAA 46889 29 100.0 32 ............................. GGGCTGCCGCACGCCTGGGACGAGTCGAGCCC 46950 29 100.0 32 ............................. CCGCAATAACAAAAATAAATGAGGGTTAAAGT 47011 29 100.0 32 ............................. TCCGCACAGTCAAACGCTCCAGACACCAACCC 47072 29 100.0 32 ............................. CCGGAACACCACCAGTAACAGCTACTGTAGGC 47133 29 100.0 32 ............................. TGACCCTGTTGATTTTGTTCCAGGTAATACGT 47194 29 100.0 32 ............................. TTAACCTCGTCGTTCTGGTTTCCGCCCAGGAT 47255 29 100.0 32 ............................. CCGCTTTAACCCGCTCCGGCAGATCCGGGTGA 47316 29 100.0 32 ............................. CCCTCCGCTTTCAGGGTGTGGCTGATATCACC 47377 29 100.0 32 ............................. CGCGCTGCGAATTTGTTGGTCGATTTCGATCT 47438 29 96.6 32 .............A............... TGGGTAGAGGTTAACTGGTTATTGGTCATTGA 47499 29 100.0 32 ............................. ATCGCGGAGGCCTTCGGTGTGTCTCTTTCCTG 47560 29 100.0 32 ............................. CCGTTGTCAATATCTCCCGGCGTCCGCGCCAG 47621 29 100.0 32 ............................. CACGTCCGGAAACCACGGGTTATCCGTGTAAT 47682 29 100.0 32 ............................. CAGAGGTCCTTATCTTTTCAACGTCAAAGTCG 47743 29 100.0 32 ............................. GACATGGCGCGCGAGTTTATCGACGCCTGCGC 47804 29 100.0 32 ............................. GGGATGAGCGTTTTCCGGTGGATTCTGATGTG 47865 29 100.0 32 ............................. GTGATCGTCATGGATATCACTGCCGTTCCGTC 47926 29 100.0 32 ............................. CAGACAGACAGCAGGCAGCAAACAGGGAAGAC 47987 29 100.0 29 ............................. GGGTTCACTTGGGTGAAACTGAACTAACT 48045 29 75.9 0 ...........ATTC...A......G..C | ========== ====== ====== ====== ============================= ================================= ================== 29 29 99.1 32 GTGTTCCCCGCGCCAGCGGGGATAAACCG # Left flank : GTGCTGTCTGCTGGCGAAATTGAACCGCCTCAACCACCGCCGGATATGCTGCCGCCGGCGATACCCGAGCCCGAGTCGATGGGAGATAAAGGGCATCGAGGGCATGGCTGATGAGTATGCTTATGGTGGTGACGGAAAATGTTCCACCTCGCCTGCGAGGACGGCTCGCAATCTGGCTGCTTGAGATCCGCGCTGGGGTATATGTTGGTGATACCTCAAAACGGATCCGGGAAATGATCTGGCAGCAGGTGATACAGCTAAGTGACGGTGGAAATGTCGTGATGGCCTGGGCGACAAACAGCGAATCAGGTTTTGAGTTTCAAACCTGGGGAGAAAACCGCCGTATACCGGTAGATTTAGATGGCCTACGACTGGTTTCATTCCTTCCCCTTGAAAATCAATGAGTTGGATGTTCTTTAATAATGTGAGATTGTTGTGATAAAGTTGGTAAATTGTTGTGTGCTTAAAAAGCTATTATAAAACAGTAATATATCTTTAGT # Right flank : CGTCCACTAACGTTATCGATCCTGAGAGTGGGCACGAAAGCTTGCGGAGAATAAATATCGCTACCTGCCGCTCTAGCGATATCACTGTTTTTTTACCGTCTCCTGGATCGCGCTAAAATCCGGCTCCGGGCAATCCCGACCAAAATTTTCGGCCCATGGGAACGGGGCGCCGTACTTAACATAGCGCTGATACAGGCGTTTGGTTAATTGAGCATCCCGCCCCCATACCCATCCTGTTGCATTACACAGCACGGCAGCATAGGCCTGTGATTTATATGGCAACAGGTCGGCCGCTTTTTCCGCCAGCGTCACCGCCTGCCAGCGATAGTGTAAGAAATGACTGTCCTGTTTTAGCAGGGATCGCTGAACGCGTTGCCGTTCGCCATCACTTATCCACGATGTCACGGCCGAATTATCTTCCGGTCCCTGGTTGTAATAGGGCCATGAATACCCGCCTCCATACAGCGCAAAATCGGGCGCCATCTCATAGCCTGTCAATT # Questionable array : NO Score: 6.21 # Score Detail : 1:0, 2:3, 3:0, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGTTCCCCGCGCCAGCGGGGATAAACCG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: F [5,4] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGTTCCCCGCGCCAGCGGGGATAAACCG with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.50,-12.00] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-8] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [76.7-51.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.92,0 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //