Array 1 557068-560136 **** Predicted by CRISPRDetect 2.4 *** >NZ_JAHZOM010000001.1 Streptococcus sanguinis strain STn373 Ssanguinis_STn373_Nina_Sia_YES_0, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 557068 36 100.0 29 .................................... AAATTTTACAAAATTTATATTTACGCTGG 557133 36 100.0 30 .................................... AAGAACGGGAAAGAGCCTAACAATCCATCC 557199 36 100.0 30 .................................... TCTTGGTCGAGGTTGTCGCTACGGCAGCGG 557265 36 100.0 30 .................................... GCGCCAGCATGTTTTGACAAGGAGGAACCA 557331 36 100.0 30 .................................... AGAGTCGAAAAGCATAGCTTTTTAATTTCC 557397 36 100.0 30 .................................... GTGCTAGAGGTTTTACAGCTTTTGGTGCGT 557463 36 100.0 30 .................................... CTAGGGAAGCGTTGAGTATTCTGTCTGATA 557529 36 100.0 30 .................................... AATCCTCGGGCACATCAGAACGCAACTTAC 557595 36 100.0 30 .................................... TTTTCTTCTAAACTAAATTCAAGTTCTAAT 557661 36 100.0 30 .................................... AGAAAGGCCTCTTATAAGACTAAGAAAATG 557727 36 100.0 30 .................................... AGCGGTTCATTTTTAGGGGCATTGTTGTCA 557793 36 100.0 30 .................................... CTTTCAGGCGAGACACTTTTTCCGCAATGT 557859 36 100.0 30 .................................... ATACATTTTCAAATATTCTCGGTCAAATTC 557925 36 100.0 30 .................................... GTTTATCGCAGAGCCAAAAGCGTGTGATAT 557991 36 100.0 30 .................................... TTAAACGAGCCAAAATCTCGATCAAGGTAC 558057 36 100.0 30 .................................... AATTTTCAATATATGTCCATTTCCTTTCAT 558123 36 100.0 30 .................................... GTAATTCCCGCACGAACGATAAGAATCGTT 558189 36 100.0 30 .................................... GTTGGGAAGATATAGCAGACTATGTACCTT 558255 36 100.0 30 .................................... CCTTAGAATTATCCACCGATTACAATTTTA 558321 36 100.0 30 .................................... AAGTCCGCTTGTGGATCTGCCTTTAACCAT 558387 36 100.0 30 .................................... ATTATACACCAAGTTTACTTGTTTTGTTTA 558453 36 100.0 30 .................................... TTACTTACAAGTTAAGTATAACATATTACA 558519 36 100.0 30 .................................... TGGACTCTAGATAAAATGATGGCAAGTGCG 558585 36 100.0 30 .................................... CGATGCCAGACCTTACTGTACTCCGTTTCT 558651 36 100.0 30 .................................... CTTTAAACATTTAAAGATCAACGAAGAAGA 558717 36 100.0 30 .................................... ATGGATATTCGAACCTACCTCAATCAAGGT 558783 36 100.0 30 .................................... GCAAAAATGCTAGCCTATGCCGTGTTAATC 558849 36 100.0 30 .................................... CTAATCCGGAAATTAAAGTCCATGGATTTG 558915 36 100.0 30 .................................... TTGAGATGGATCATTTGAGAAATCTCCCTT 558981 36 100.0 30 .................................... GATGTTTAATGGAAAATAAGAAAAGATACA 559047 36 100.0 30 .................................... ATTGCCGTTGTAAGTTATAATTTATTTGAA 559113 36 100.0 30 .................................... AAATTCCTTCAAACTATGTCCGTGATTCTG 559179 36 100.0 30 .................................... ATAAGGATAAGGTTAAACATCTTTCTGAAG 559245 36 100.0 30 .................................... CAATAAGCATTGCTTTAAACTCAGCTTCTT 559311 36 100.0 30 .................................... AAATTAAACCAAAGGTTGATAATATTAATC 559377 36 100.0 30 .................................... GATTGGGATGTCGGCTAGGACTAGTTCCTT 559443 36 100.0 30 .................................... TTCGAATATGCAATTCTCTTGCCCTTTTCA 559509 36 100.0 30 .................................... GGTACATTTCTATGGCTGAGGGAGCTGCAG 559575 36 100.0 30 .................................... AAAAAACGTGGAGCGAGTTGGAACATGCCT 559641 36 100.0 29 .................................... TCTATCATCAGGATTTTCCGCATTAGCAC 559706 36 100.0 30 .................................... CTTCCATTCCAAGACGGAAACCGCCGATAC 559772 36 100.0 30 .................................... TCCAAATGTAAGCCAGTCATAGGCTGGAAG 559838 36 100.0 30 .................................... AAACAAACACACCTGAAACAGTTGCGCAAA 559904 36 100.0 30 .................................... TTTTGACGGTTTGCGTTTGTGTTGGTATGT 559970 36 100.0 30 .................................... TGAGAGTTATTTTGCCCTCTTGTCTCTGCT 560036 36 100.0 29 .................................... CTAATAACGTTCCCTTGACTGTGGGGCTG 560101 36 100.0 0 .................................... | ========== ====== ====== ====== ==================================== ============================== ================== 47 36 100.0 30 GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Left flank : GGATAGTTATTTAAACTATAGTGAGTTTATAAATTGTTGTAAAAAGATGAATGAGATGACTATGGATTTACAAAATTTTCACGTTATTAACTTTCTATCAAGCGAGGGATATATTTATATAAATAAAGAAAACATAATGAATGTTAATATTGTTGCGGATTTAGTAGAACACTTTTACGAATTTTCATTTATGTATGAAAGATTTTTTGGTCAATATCCTGCTAATGAGGTACCGGATGAAAAGGTTTTTTTAGAGTCGTTACAAAAAGTTTCATCATATCTTTTTAGTAAGGATATTGCTCATATTAGTTTATCTATTCCAGATATAGTTACTTTGAAAATTATAAATCATTTGTACCAATACGATAAAAAGCCAAGAATTTGTTCTACGATGTCTAATCCGCTATTAATTAAGTTTTTGAATACCTATAATTGACAGGAATCGCAATAGGCATTATAATCAATATATGAGTATAAAAATCACAATTTTTCCATTTGAG # Right flank : CAGCTTACTATAGACCAGATAGCGTTGTTCTGTTTTTATTATAGTTTAGGATAGAGGGGAATCTGTAATGTTTTATCATAAAAAGGGCTGAGTAAATCAGTCCTTTTGTTCTCTATTTCCCCAAGCAGAATTGGCTGAAGAGTTGGGTGATGAGTTCGTCTGGTGCGGCGTCACCAGTGATTTCGCCGAGGATTTCCCAAGTGCGAGTCATATCGACTTGGAGAAGATCTACCGGCATACCCATTTCCAAGCCTTGGTTGACGGCTTGCAGGCTTTCTAGGGCTTTTTCAATTAAGGAGATATGGCGGGCGTTGGATAGGTAGGTGGCGTCTTGCTCGACGATACCAGCATTTTCAAAGAAGAGCTGATTGATGCGTTCTTCAATTTTATTGATATTTTGATTGTGGAGGACAGAAATCTTGATGACATCAGTTGGCAGCTGATCCAGCTCAATCTTTTCCTCAAGGTCAGTCTTGTTAAGCAGGACGATACGATTACTA # Questionable array : NO Score: 6.26 # Score Detail : 1:0, 2:3, 3:0, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: F [matched GTTTTTGTACTCTCAAGATTTAAGTAACTGTACAAC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: R [0.00,-1.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [75.0-65.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : II-A/C [Matched known repeat from this family], //