Array 1 40108-44829 **** Predicted by CRISPRDetect 2.4 *** >NZ_BJTX01000008.1 Schleiferilactobacillus harbinensis strain NBRC 100983 sequence008, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== ============================== ================== 40108 36 100.0 30 .................................... AGGCGGTGCTGGTCAGCCAGAAACAGAGTT 40174 36 100.0 30 .................................... TCAGCCCACCGCAAGGTGTGACTGCTATTA 40240 36 100.0 30 .................................... GACACTTTGCGATGGTGCATTTCCACAGAT 40306 36 100.0 30 .................................... TCAATCTTGACCGAACCGCCGCGATCTTCT 40372 36 100.0 30 .................................... GTGTCCCGTCGTAGTATGCTACCATCTCTT 40438 36 100.0 30 .................................... ACGGACTGCTCAATGAGTACGGCAGCAGGC 40504 36 100.0 30 .................................... GGGGTGCAGATGGCACTACGCCTGACCTAA 40570 36 100.0 30 .................................... TTATGCTGCTGATCACTCCAAAGAATCAGT 40636 36 100.0 30 .................................... CCAATAGTCTCGTTCTTTCTCCGCCGCTTT 40702 36 100.0 30 .................................... GAGTTCAGCACGGTTATTCAGCTCTCGAAG 40768 36 100.0 30 .................................... ATAGTCCAACATGTTGGCTGCTTGCTTAGC 40834 36 100.0 30 .................................... CTACCAGTGCGAGCTACCATGTCTTTAGCG 40900 36 100.0 30 .................................... CTTCTATTTGGTCTCTTCTGCTAGCACTGT 40966 36 100.0 30 .................................... AGGGCCTCAGCAAGGGTCTGGTAATGATGC 41032 36 100.0 30 .................................... TTAGTTGAGGCGAATCAGTCAGCCAGCTTA 41098 36 100.0 30 .................................... CTTGAATTAGTCCCACGTCATCACCTTCTA 41164 36 100.0 30 .................................... ACGGAGACGAAGTCGGAGACCCCCGCCTCT 41230 36 100.0 30 .................................... GCTTTGATTGCCAAGCCAACGATTAAGGCA 41296 36 100.0 30 .................................... CATAACACGGATACAATGATGATCCCTGAT 41362 36 100.0 30 .................................... CCGGGTGGTAGTCAATCCAAAGACCAACGG 41428 36 100.0 30 .................................... GCGCGTCAATGGTGATTCTATGGAACCGAT 41494 36 100.0 30 .................................... CATGACTCAGGCTCATCCACTGTTGAGCGT 41560 36 100.0 30 .................................... AAGTTTCTAGCAAAGGTAGGTGCAAAGCCA 41626 36 100.0 30 .................................... CAGTTTTACCGAGGGTTTTGCTACTCCATT 41692 36 100.0 30 .................................... TTTGCGCGGCTTGACGCTGGCAAGCGTGGC 41758 36 100.0 30 .................................... GCAAAAACGTCGAACCACACCCGAACCACA 41824 36 100.0 30 .................................... CGTTTACTAAGGGGGCTACCGATATGATTA 41890 36 100.0 30 .................................... ACCGGCCTTAAACGCTGCATTAGTTGAACC 41956 36 100.0 30 .................................... AAACAGACACATCTGTAGTGGAGAATACTT 42022 36 100.0 30 .................................... GCAAGCGATGTTTACGATTACGTTGAGGCA 42088 36 100.0 30 .................................... GCTGACCTTGGCTGGGCGCTTGTTTGCCTT 42154 36 100.0 30 .................................... ATCTCTCTTGGTCAGGTTATCATCAGCCAA 42220 36 100.0 30 .................................... GTTCTACATTGACGATGCTGCTGCTGCAGC 42286 36 100.0 30 .................................... CTGTGGATATCGCAATCATCGCATTTTTTT 42352 36 100.0 30 .................................... AATGGTTACCACGATCGAGACGGCCGTGGA 42418 36 100.0 30 .................................... CTGTCGATCAGCGTCACTGCATTGCTGTAA 42484 36 100.0 30 .................................... GTTGCACGTTGCTCTTACCCGTGACAACTT 42550 36 100.0 30 .................................... AGCAAGCCCCGGCGGCGGCTATTGATCCTC 42616 36 100.0 30 .................................... TTCCACTGCCACACTTGTTTGCCAGAACTG 42682 36 100.0 30 .................................... AAGTAGTTATTTACTTTGGTTCGCAACAAA 42748 36 100.0 30 .................................... GCCAAGTCCGCCGCCAACCGCAATGCCTCT 42814 36 100.0 30 .................................... GTGGTCTACCCTATTGTTCATATACCACTG 42880 36 100.0 30 .................................... TTTCTGTTGTTCCTCTGTTTCATTTTCCAG 42946 36 100.0 30 .................................... CTCTAACCAAGCAGGAACAGCCACCGCTGA 43012 36 100.0 30 .................................... CCGTTTCAGTATTTTCTTCGTCGGGTTCAA 43078 36 100.0 30 .................................... TACTACGGAAATCCTAAACCAATAAAATAC 43144 36 100.0 30 .................................... TTGCCTTATGCCTATGAGACTGGCAGTGAT 43210 36 100.0 30 .................................... CATTAGATTGTATTCAGTCAGAGTTGGCAG 43276 36 100.0 30 .................................... AAGGAGGGCGATTATGTCAGATGAACCTTT 43342 36 100.0 30 .................................... ATCCTACAAGAGTAGTAAATAAGCAAAGGG 43408 36 100.0 30 .................................... TGCTTTATAGTGCTTATATAAGTCCTTGAA 43474 36 100.0 30 .................................... ATACGTTACCTTTGAGTTATGACTTCTTTT 43540 36 100.0 30 .................................... GGTTTAGGGACTAATACGGGAAGCGGCTTT 43606 36 100.0 30 .................................... TGATCTCGCCAGCACATGTTGATTACGACA 43672 36 100.0 30 .................................... CTGTAAGAACTTGGAATGAGAATACAGTAA 43738 36 100.0 30 .................................... AAACCATTGACAGCCCCCGCAAGCCATGCT 43804 36 97.2 30 ........T........................... TCAACCGGCGAGGCCTCGCACCTCAGGATC 43870 36 97.2 30 ........T........................... GAAGGGTTTACTGCCAATACCCGACGTATT 43936 36 97.2 30 ........T........................... GGTTGGTGCTATCGCTGGCGCAGTGAGTAG 44002 36 97.2 30 ........T........................... TGCTACGCCCGCCGCCCCATTGCAGGGGCG 44068 36 97.2 30 ........T........................... TTGATAAAGTCAACAATCAAAAATCAGTTA 44134 36 97.2 30 ........T........................... TAGTGCAACTCCGCCACGTGGATGCCCTGC 44200 36 97.2 30 ........T........................... TCAACAGCTTGAATGGATAACTGCATTGGA 44266 36 97.2 30 ........T........................... CGTTTACTGAGGGGGCTACTGATATGATTA 44332 36 97.2 30 ........T........................... CTGCCCCATGGTAACATTGCTTTCCTCGTC 44398 36 97.2 30 ........T........................... ATCAAGGCTTGAGCAATACTGAGATTGCCA 44464 36 97.2 30 ........T........................... GAATTAACACACGAGTTATCAGCTCCTCTC 44530 36 97.2 30 ........T........................... GGTCCCGCCGTGCTGATAGCCATCTTGGTA 44596 36 97.2 30 ........T........................... AATGCAGCCCGGCAGCAGCATCGTAGCCGT 44662 36 97.2 30 ........T........................... CCAAGCCGTAAGCCTTCAAGGCCTTATCTA 44728 36 97.2 30 ........T........................... AGAAGACTTGGGACGGAATCGCTCAACGGC 44794 36 97.2 0 ........T........................... | ========== ====== ====== ====== ==================================== ============================== ================== 72 36 99.4 30 GTCCCATTCTAGCCGATTCTGGAAGGATCCAATAGC # Left flank : TGACGATTCCTTTCAGACCGTACGCAATGCGATTCATTTAACGATTGAAAGTATTGGTGCAGCCTTTACCCAGGAAAAAATTTCTGGCGTCACTCTCCCTCAAGTGATTCCATTAGCCCCCCATGGATTCTCCTAGGTTCATGCGAGTAATTGTAATGTTTGACCTACCGGTTGTCGCGAACGAGGATCGAAAGGCAGCAAATCGGTTCCGTCATGACCTAATTAGCGAGGGATTCGTCATGATGCAGTATTCAGTCTACTACCGGATCGTCAATGGCTTAGACATGGCAGCCAAGTATGAAAAACGACTTGAGGGTTACCTGCCAGAAAAGGGGCAAGTCCGCTCTCTAGTTTTGACGGAAAAACAATTTGCACATATGAAGGTGCTAGTTGGAGACGTCAGTCCACAAGAATCAGATGTCACCGGCAATTCACTGACCAGTTTATAGACACGAAAAGAGGACGCAAACCGCGAGGTTGCGCCCTCTTTTCTCTGACCT # Right flank : CCTGCGCGCGATGATCCTGCTGCGGCTATTTACGATGCAGCTGATTAAACGTGGGGTAGGGCACACCGTAGTTGCTTATATTAATGCTCTCCTGCAACCGCTGGCTGGCTTCTGCATTCATTTTCTGCTTTTCTGGCGTGTTATTTTCGTAGTAAATGCATTCCGCCACGAAAGCCAGAAAAGCAATTGTTAGAAAAATTGCCACACTGGCAAGCATCCAATCGCTCATTTTGATCACTCTTTTCCGAGACGCGCGGGCACGTCGTGTATAATGTCAATGCTGTATTTCATTTTTCAACCGCGCCGGTACTTTTTATGAGGCGCCAGCGCCTGCCGTGCCAAGTAGCGGGCGGCAGCGGGCGTCGTGAAAAATACACTTTCAGGGCGCCCATTGTATAGAATTTTGACCGCTGCCAAATCAATTTTCATAGGCGCTGCCACCAAAATAGTTGTCATAATCCAAGGACGCCAGAGAATTTTCTTCGCGCACGCCGGCAATA # Questionable array : NO Score: 3.23 # Score Detail : 1:0, 2:0, 3:0, 4:0.97, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTCCCATTCTAGCCGATTCTGGAAGGATCCAATAGC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [9,9] Score: 0.37/0.37 # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-4.00,-3.70] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [50.0-43.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [0.37,0 Confidence: MEDIUM] # Array family : NA //