Array 1 42768-42283 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000055.1 Nostoc sp. LEGE 06077 NODE_122_length_42892_cov_24.0013, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 42767 37 97.3 35 .G................................... AATCTGTCCTCTCCCCAGAGTGTACGCCTGTGGGA 42695 37 100.0 34 ..................................... AGCGTTGCGGCAGTGGTCGTTGTTACAAAGTAAT 42624 37 100.0 41 ..................................... GTAATTTCAAAAGTTTCCGTACCATTGAGCAGTAGCTCGGA 42546 37 100.0 41 ..................................... ATCATTAGAGATAAAGCACAAATATTCGTCCCTGCTGATTG 42468 37 100.0 41 ..................................... GACCGATGAAGGTGCAATCACCACACGTGAGGAGCGCAAAA 42390 37 100.0 34 ..................................... ATTAATCCTGATGGTAGCCTTGGCTATGTTTCTC 42319 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 7 37 99.6 38 GTTTAAACTTCACCTAATCCCTATTAGGGATTGAAAC # Left flank : TGTTGGGTGAGCGTCTCGACGTAAATGTTTCAGGATTTGTAATTCCACATCCATTGCCCTGCTTACCTTCCAGAGTTTTTTCTTTTAATCCTTTTATTTAGAATACTCGGAAAGTGACAGAAGA # Right flank : TACACGCTAAGTACCAGAGAAAGACAATAGACCTGTTGTAAAAGTAATTTTGTATGCTTTTATTTATGCCTTTGCACTATCCTGTGGTAATGCCTAGCGGCGAATGCGTAAGTCCTGAGATATTTATGTAAGAAGTCTATTACTTCATCACCAGAATAACTGGATAATAATTCATACCTTATAAACACCATCTAAACGTTATTAGACTCTGGACTTAAAAACTTTAATTACGATAAAAATTTTGTTTTTATAGACGAAACTCCTTGAATTGTGTCTAAAAAATCAGGTGAAAAATCTTGATTTTAAAAAATGCACATACAAAATATAAGAGAGAGATAATATCTGTGCAGCTTTATTCTATTTAAAGCTGTATTAACTCACTTCACTATATTTGCAGAGGTAAATCAATGGCAAGAATCACAATCTCAGACCTTTATCTTAATAGTGACGATCAGTATATTACTGAACTAACTGCTTCGGAAGCTAGAACTATAGAAGCA # Questionable array : NO Score: 9.24 # Score Detail : 1:0, 2:3, 3:3, 4:0.98, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTTCACCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [66.7-66.7]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.5 Confidence: HIGH] # Array family : NA // Array 1 18730-20355 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000004.1 Nostoc sp. LEGE 06077 NODE_5_length_247106_cov_23.2064, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 18730 37 100.0 36 ..................................... ATACTTTTGGGAAATAAGAGGAGGGGGTGAGGTTCC 18803 37 100.0 34 ..................................... GTTAAATCCGCTTTTGATTTAGGATTTCCTCAAG 18874 37 100.0 42 ..................................... CCTTGATGATTTGGACGCGATCTCCTGGCTGAAATTCGTTGA 18953 37 100.0 36 ..................................... GACCCCAACGCCACCCCAGAGCAAAAGGACGCTGCA 19026 37 100.0 35 ..................................... TTATTTTTGAAGGCGCTGATTTTGCGCCCACCAAT 19098 37 100.0 34 ..................................... GTGAATGCATTCGGGCAATGGCGTATCAATGTTG 19169 37 100.0 35 ..................................... TTGTATGAAGGAAAACAACCACCAGCTTTATTTGC 19241 37 100.0 40 ..................................... ATTCTCATGCTTTTGCTCCTTGAGACAAGCGATCGCTCAA 19318 37 100.0 36 ..................................... TCAATAGAGTAAGTTGTCAACTGACAACTCACTTTA 19391 37 100.0 35 ..................................... ACCTCTACAGGTAATGAATCGCCCCGCCCCAAATT 19463 37 100.0 34 ..................................... CAATCATGTTCAGAATTGGGATGCAAAAATTCCC 19534 37 100.0 35 ..................................... AAAATCTGATTGATAACTGCTTTATTGTAGATGAG 19606 37 100.0 30 ..................................... TAATGCAACTAATCCCAAAGATGCACGCAC 19673 37 100.0 35 ..................................... TAAATATCTCATTTCGCTGGGGTGTATCCCCGCAA 19745 37 100.0 36 ..................................... TATCTAAAAACTCAAACCTGGGAACCAAGCTATGTT 19818 37 100.0 39 ..................................... AAACGCCCAGAAAAATAAAGCAATTCCTGCACCTGATCG 19894 37 100.0 34 ..................................... CCGCATTGGGCAAGGCTCATCAACATCTACCAAT 19965 37 100.0 34 ..................................... ATTTAGCTAATAATTGCTTACCTTCAGCAAATTT 20036 37 100.0 34 ..................................... TGTAATCATTAAAATATCGGCAGACTTATATTTA 20107 37 100.0 35 ..................................... CCGATGCAAAGGCTGGAAAACTTTTCTGGCTTTGA 20179 37 100.0 33 ..................................... GAGCATATCAGCCATAACTTAGTTATTACTTTT 20249 37 100.0 33 ..................................... GTAGTTACCAAGAGAGAACACAAAATTATCTAA 20319 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 23 37 100.0 35 ATTGCAATTCCACTTAATCCCTATTAGGGATTGAAAC # Left flank : GTGGCAATGTGCAATCAGAAATCGGCGATAAACAAGAAGCAATTGCCGATTTCCAAAAAGCTGTAGAACTTTATCGCAAAGAAGGTAAATTAGATGCGCTTAAAGATGCACGAGCAAGAGTTTTAGATTTGCAAATTGAAGAATCATTAGATATTTTGAATTTCTAAATATATTTAGTAATACCAATTCTGCGTAAAGATGCACTTAATATAAAATAATATAAAAAACCGACCCGCTAAGTAGGCTGAACAGCACAACAAAAAATCTATCTAAATGCGCGGATGGGTAGGTGTACAAAATCGCCCTTGAACAACAATCGCTAGATTCCTTTCAGCACAAGCTTTTACAAGAAATTTTAATTAAAATTATCCGCGCACCTTACTCAGTCTACATTACAGCTATTTTCGTTCAATTAACTTACATTTGCTTGTGTTAAAATTAATCCATCCGCGAAATAGAACCTTGAAAACTAAATACAGATTGGCTTTCCGGCTTCAGCG # Right flank : CTCCACTTCGGTACACCCAAACTACAAGAAAATTTGGCATTATTGAATTAGGGGATGAAATCTCAGAGGATATCTGAAAATTATTAAATATTTCTATTGATCCCCCCTAGCCCCCCTTAAAAAGGGGGGAAATAATTCAAAGTCCCCCTTTTTAAGGGAGATTTAGGGGGATCTACTAGTCTTGAATACAACACTAAAAAGTTTTCAGACATCCTCTCAAATATTCAATTTAACCGAGTGCGATCGCACTCGGTTAAATTGGGTAAAGTACCCAACCTAATATTGCTAAGAAATGGACACAACCCAATCCCTTAAAAGTTGGTTTACCTCATCGGGAATTTCATCATGGGGACAATGACCAGCTTTGAGAAAATATTCAGTTAGTTGAGGATAATATTGGCGAAATTTTTGCGAACGTTCTCGCGCCTTCATCCAAGGATCAGCTTCGCCCCATAATAATAATAAAGGACAAGTTAAGCACTGCAATAGCACATCAACTT # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCCACTTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: NA [56.7-63.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.5,0.37 Confidence: HIGH] # Array family : NA // Array 1 16876-17785 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000029.1 Nostoc sp. LEGE 06077 NODE_57_length_81110_cov_22.9124, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 16876 37 100.0 35 ..................................... GTATCTCAATCCTGATGTTGGCTTTTTCCTGGGAA 16948 37 100.0 34 ..................................... AAAAAAATCATTGAGTGGCAAGGATTTAAAATTG 17019 37 100.0 35 ..................................... AAACCAAAAAGCCCGATTCCCACAGCTTCAATTGA 17091 37 100.0 40 ..................................... TAATGCCCAGAAGTTTAAAAAAGTTTTTGACCAAATAGGA 17168 37 100.0 34 ..................................... TGGCTAGTTATGCTATCTAAGCTTCGTGTGCCTT 17239 37 100.0 42 ..................................... TCTCACGACTCACGCCTTATTCAGCAATTGGAGCCAGCGATC 17318 37 100.0 35 ..................................... TTCCTATGCATTTAGCTCTTGAGCCTTCACCCATA 17390 37 100.0 34 ..................................... AGTTTAACGTCAGAGAATTCTTTAAAGGAAGCTG 17461 37 100.0 37 ..................................... GATAGATTCAGAAACTTCTGGACTGGTCAGCACTGCC 17535 37 100.0 35 ..................................... ATAATCCCTCCACGATTACAGCTGATAGCTCTTGA 17607 37 100.0 33 ..................................... TCCCGCTACACCTAAAATAGATTTATCTTTTAA 17677 37 100.0 36 ..................................... ACCAGAGATTGAAGAAAGTTATTTCTGTCCCGACTT 17750 36 83.8 0 ....................A...T.CA....-.G.. | ========== ====== ====== ====== ===================================== ========================================== ================== 13 37 98.8 36 ATTGCAATTTCAAATAATCCCTATCAGGGATTGAAAC # Left flank : AAAGAAAGTTGTTGTATCTTACGATGTCCCGGAAGACAAACGCCGCACCAAAATCCATAAAATTTTGAAGTCTTACGGACAGTGGGTGCAGTATAGTGTGTTTGAGTGCCAGCTTACCGAGACTCAATATGCCAAATTGCGATCGCGCTTGCACAAACTAATTAAACCAGATACCGACAGCATCCGCTTTTACTTTCTCTGCGCTTGCTGTTTTGATAAAATTGAACGCATCGGTGGCGAACAACCCCGTGACGAAAGCATTTTCTTTGCTGAATGAGCGGATGGGTAGGTGTAAAAAATCAGGGTTAATGAAAAATGGCTGTATTCCTTTCAGCACAAGCTTTCGCCAGAAAATTAAATTAAAATCATTCGCGCATCTTGTACAGCATGGGTTTCAGCTATTCTCCTTAAGTCAACTGACATTTTCTACTGTTATAATCAACCCATCCGCGAAACCGAACCTCGAAAACCAAATACAGATTAGCTTTCCGGCTCCCGCA # Right flank : CCTCTTGCAAAAGTCTTTCTTTTCATCTTTTTCTTTGCGTCTTTGCGCCTTTGCGTGAGACAAAAATATTTATGCAATAGGTCTATTGAAAAGGTTGCCAGCAATGAATAATCAGCAAACCGCGCAATCACTACAGTAAAAAATTCGTTTTCGCTGTCAATACCTTAAGATATTCTAGCGATCGCTCCACTAACTGGCACAAGTTGAGCCAAAATATACTTTACCCAAAACAAGATTAAGTATATACCTACACGGCTGACACTTATGTCATCGTCCCCAGAGCGCCCGTTAAAAATTAACCTGACTCTACCATCTTCCCATCCGCAGCTATTGGAAGGATTGGATTTGTGGCTGCGCTTAGGGTTAATATCTGATGCCCAAGTTAAGCAGCTATGTCGAGAATATCTCACCTGTGTAGTGGTGTTACAGCCGCAAGGCGCACCAGAACCACAGGTAGCAGTTGCAACTCCGAGACAAGCAGAAAAACCATTAATTGCCTA # Questionable array : NO Score: 9.20 # Score Detail : 1:0, 2:3, 3:3, 4:0.94, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTTCAAATAATCCCTATCAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-6] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [48.3-58.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.91,0.64 Confidence: HIGH] # Array family : NA // Array 1 59876-59547 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000035.1 Nostoc sp. LEGE 06077 NODE_68_length_73666_cov_23.0917, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ====================================== ================== 59875 37 100.0 36 ..................................... GCGAAAATGGAATTCAACGAAATAGCCTCAACGGTT 59802 37 100.0 38 ..................................... TTACAGAAAACCATTCCATAGATAAGCGTGATAGGGGA 59727 37 100.0 35 ..................................... TGTTTACCTTAAGAGTTACTTGGTTTAGGTCACTT 59655 37 94.6 35 ................A.......G............ TTGCCGGGATGGGATTGGGAATAATCCCCACCTCA 59583 37 83.8 0 ........G.....C.T.......G..AA........ | ========== ====== ====== ====== ===================================== ====================================== ================== 5 37 95.7 36 GTTTCAACAACCATTCCGGCTAGGAGTGGGTTGAAAG # Left flank : GCTTAAATTTAATTCACTAATCCGAACCTAGAAAATATAATATTTTTATAACAGCGCCGCAGTTCATGCTCTTTTGAGCCAATGTACTGTGAAAAATCTGGGTTAGTTTGGCGGTTGGAAGACCGTCATGCTTTCTGACCCTGGTAGCTGCCCGCTTCTGATGCTGCTGTCGCAAGATAGGATAGGTGCGCTCCCAGCAATAAGGAGTAAGGCATTTGGCCCTAGCCGTTATCAATAACGGTGTGGATTACCACAGTGGTGGCTACTGAATCACCCCCTTCGTCGGGGGAACCCTCTCAAATATTTTTTTTGGCATATCGAAGCGGGGTCAAAAACCCTGGAGACTTGCCAAAATCTTAAAACCCTTGTCATGTCTTCACTTCAGAAACTAGTATGTCAGTTGATTTACTTTTTTGATGTAAGACAAAGGAGGTTTTTTCAGAGATATGCCAAATTTGTATCTGGAAAGCTGTATTTACAAGGGATCTAGACGGCGGGGT # Right flank : TATTCTCCTACATAAGAAAAGACAGGAATAAGCTCGTTTCAAGAATGATACCCAATCATAGATACGTTAAGAAGGTATTGTTATTTTATTTGTCTTTGCGTCACACAAATTTTTCCAGAGGGGAGAGGGTTGAAAGGTGCATCCGACTTGTAAGCCTATGATATTCTACATATTTACCCTGATGATTAATATGGAAGAATTTGGCTATGCAAACGTAGTTATTAACTTGTTAAAGTAAAATTTTAGTCTTAAACTTAAATCTAAATAATACGACAACACCCAACCAGGAACAAAACGACATTAATTTGCGAAAAATCTGGTCAATCAATATTGAGTCTAAAACCAGTCAAAACGACATTAATTTGCAAATTGCGACAAATAATTTGCGAATGTACAAAAAGCCAGCAGCTGGATTTGAACCTGCGACCTTCCGATTACAAGTCGGATGCACTACCACTGTGCTATGCTGGCAACATTAATCTCACCGATTTCTAATTATA # Questionable array : NO Score: 2.85 # Score Detail : 1:0, 2:0, 3:0, 4:0.79, 5:0, 6:0.25, 7:0.01, 8:0.8, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTCAACAACCATTCCGGCTAGGAGTGGGTTGAAAG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:51.35%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-5.90,-11.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [8-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [66.7-56.7]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.27,0.78 Confidence: MEDIUM] # Array family : NA // Array 1 368-122 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000106.1 Nostoc sp. LEGE 06077 NODE_730_length_8767_cov_23.4022, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ==================================== =================================== ================== 367 36 100.0 33 .................................... CCAGCTTTTACAAAAACAAATTGCCGAGAATGA 298 36 100.0 35 .................................... AAACTGATTAACATCAAGTATATCCGTTGACTGAT 227 36 100.0 34 .................................... AAGAGCCGCCTTTCTAAAAAAGTATGGGAGTATG 157 36 91.7 0 ................................GTG. | ========== ====== ====== ====== ==================================== =================================== ================== 4 36 97.9 34 TTGCAACTTTAATTAATCCCTATTAGGGATTGAAAC # Left flank : ATTTCTGAACAAGCTAAGTCGCTTTATACAGAATTATCTGGCATTGCCGATTTATCTCAACTTTTACCAGATGACTTTGCCATCATTCGGGAATATTTGCAGCGACGTGGCGCAATGGCATCCAAATCAAGAGTTGCACTTGCGTCTAAGTTAACTCAACAAGTTGCAGCGATTGTAAATCTAGATCAACTGCCAGAAGTTGCGCCTGATGTATTTTTAGAGGCTATTTACTTAGCTTATCAACACAAAGAATTTTAGTATTTTTGCTGCTGGCGGCGCGGATGGGTAGGTGTAGAAAATCAAGGTTGAGGCAAAATCGCTGTACTCCTCATGGTGCAAGCCTTAGCAGAAAAATTTAATTGAAAACATCCGCGCACCTTTCCTAGACTACGTTTCAGCATTTTTGTGTCAAGCGACTTCAATTGTGAGATGATACAATCACACCATCCGCGAAATCGAACCTTGAAAACTAAATACACCTTAGCTTTCTGGCTTCCGCG # Right flank : CGACTATCGGTTGCACGACGAGAGTGAGTATCTCAGAAATACTCCTGGCGAGTGTCAATGCCAGTACCCGCCCAAAGGGGCATTATAGGTAACTGTGATGTCTCAAAGCTAGAGGGTAAAAT # Questionable array : NO Score: 8.76 # Score Detail : 1:0, 2:3, 3:3, 4:0.90, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : TTGCAACTTTAATTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:69.44%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-53.3]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 8450-8927 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000074.1 Nostoc sp. LEGE 06077 NODE_156_length_32712_cov_23.6283, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== =========================================== =============================================== ================== 8450 43 93.0 32 .....................C.....A.........G..... CTCTTCACTAGCAGTCATTTCCTCTGTGTTGA Deletion [8525] 8525 43 100.0 47 ........................................... TACTTCATCGTTAACTGACTCTCTATCAGTCATTTCCTCTGTGGAGG 8615 43 100.0 47 ........................................... TACTTCATCGTTAACTGACTCGCTATTAGGGATTTCCTCTGTAGTGA 8705 43 100.0 47 ........................................... TACTTCATCGTTAACTGACTCTCTATCAGTCATTTCCTCTGTGGAGG 8795 43 93.0 47 .....................C.....A.........A..... CGGTTCACTAATAACCGAGTCACTAGCAGTCATTTCCTCTGTGGAAG 8885 43 86.0 0 .................TC..C.....A..........C...A | ========== ====== ====== ====== =========================================== =============================================== ================== 6 43 95.3 44 CTGAGAAAGTGCGATCGCTTGTAAGTACAGTTTCTTCTACAGG # Left flank : TTCACCCAAAAGCAGCTTAGATTCGCAGTCAATCGGAATATTAATGGCAGAGTTAATCGCAAAAGGCAGTAAATTATCTGCTAACGGTTGCCGTACCTGAGCTAAAATTTCCGAACTCAAAGGTGAGCGTAGCTCGATTTTGACCTCTAGTGCATGAAAATTAGTTGAATACTGTGGCTCATCTTCCAGATATGGCTGTGCTTGTAGCTCTACATAAGCGTTAATGCTCAGTCCTTGTCCCCAACGAGCAATATAGTTTTCTTGCTCTAAAGTCAGCCTTAGCGGCGGTACTGGTTGTATCGTTGCTACTTCTTCAAGCTGTTCATCCTCTAATAATGCGGTGGGTAAAGCTTGATCTATTAAACTTTGTAAAATTTGCTCTGCCGTTTCACCCTTCAGCCATACGGGACTCACAGGCTGATCAATCATTCCATCTTCATATTTTTCAACATACTGTTGAGAAATAACCAAGCTACTAGCAGTCATTTCCTCTGTGTTGA # Right flank : ACAATTCACTAACAACCGAGTCACTAGCTTGGATTTCGTCTGCTGTTGTGAGGACAGTATCATCACTGGCTATTGACGCAATTTCCGCAGAAAGTTCGTTATTAACTAAATTGCTCTGTGTATGAGATTCTGAGTTTAGGGAAATTGGCTGTTTACCAGCACTACTATCTGGCTCATAAAAACTTTGTGTATGTGGCAATGGAATCATGAAAAAGTCAAGAGAATTTGACTCTACATTGCCACCACCATTTAACGGCTCAATTTCGCCATTTGCCAAAATAGGCAAGACTTGCAGATAAACACTCTGTTGCCAAGATTTACCAAAAATATCTGACATCAAATCGCCAGAGCAGCGTAACTCCCATATTCCCGGTTTGAGGAGCGTAAAAGGAATTACCGCCATTAAACCTTCTGAGGTAGTGCGCCGCGATTGCTTTTGAATGCGCCGTTTTGGGGGAACTTCTTGAGTTGAAGAGTGAGTTACCCGCACTTCCACATCC # Questionable array : NO Score: 2.62 # Score Detail : 1:0, 2:0, 3:0, 4:0.76, 5:0, 6:0.25, 7:0.01, 8:0.6, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : CTGAGAAAGTGCGATCGCTTGTAAGTACAGTTTCTTCTACAGG # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:55.81%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-2.80,-0.80] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [3-9] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [65.0-55.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [1.05,0 Confidence: HIGH] # Array family : NA // Array 1 743-122 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000071.1 Nostoc sp. LEGE 06077 NODE_148_length_35272_cov_22.5423, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 742 37 100.0 35 ..................................... CTTTGACTTATGTAACTCCTGGTAGTATTCCTAAT 670 37 100.0 36 ..................................... CTTTTGGTTACTAGTAGATATTTCAGGATTGACAGA 597 37 100.0 33 ..................................... ACATCAAGGCACATTTTTCACACTTAGCTAAAT 527 37 100.0 34 ..................................... GTGTCTGGCATTCCCATATTGGGCGGGGTATACC 456 37 100.0 35 ..................................... GGAAGTAGCCAAACTACAACAGCGCATAGATGAAC 384 37 100.0 39 ..................................... GGCATAGGTTGTACCTAATTTTCTAAGCTCAGTGTCTTG 308 37 100.0 41 ..................................... AAATTTATTCAAAAAAGCCATAAGCTTGGACGCATTCTTTG 230 37 100.0 35 ..................................... ACCAGAAAACTGAGGCATTCCCGCCGCCCCAGTTG 158 37 91.9 0 .................................GTG. | ========== ====== ====== ====== ===================================== ========================================= ================== 9 37 99.1 36 GTTTAAACTTCACCTAATCCCTATTAGGGATTGAAAC # Left flank : GTTATCAAAAAGCCGTCGCCGCCACTACAGCAGCAGATGTACAACGAGTAGCCAAGCAATATCTCAAACCAGAAAACCTGATAACTCTGGTAGTCGGTAATCAAACTACCATTAAACCGCCATTGACAGGTTTAGCAAAACAGGTAACACCCATAGACGTAACAATTCCTGGTTCACCATCACAAGCGAAAAATTAATCGCAATATAATATCTAGATTCCCGACTTTTTAAAAGGTCGGGAATCTTGGAAACTAGCAAACAAAATCCCTCAAAATGCGCGGATGGGTAGGTGTACAAAATCTCCCTTGATCAACAATCGCTAGATTCCTTTCACTGTAAGCTTTTGCAGAAAAATTACATAAAAACCATCCGCGCACCTTATCCAGTCTATGTTTCAGCTATTTTGCTTAAATCAATTGCCATTTACTCGTGTTAAAATCAACCCATCCGCGAAATCGAACCTTGAAAACTAAATACAGACTGCCTTTCCGGCTCCCGCA # Right flank : CGACTATCGGTTGCACGACGAGAGTGAGTATCTCAGAAATACTCCTGGCGAGTGTCAATGCCAGTACCCGCCCAAAGGGGCATTATAGGTAACTGTGATGTCTCAAAGCTAGAGGGTAAAAT # Questionable array : NO Score: 9.21 # Score Detail : 1:0, 2:3, 3:3, 4:0.95, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTTTAAACTTCACCTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:64.86%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: R [3-0] Score: 0.41/0.41 # AT richness analysis in flanks prediction: NA [50.0-50.0]%AT Score: 0/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.37,4.91 Confidence: HIGH] # Array family : NA // Array 1 102418-103848 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000019.1 Nostoc sp. LEGE 06077 NODE_39_length_103865_cov_23.351, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================== ================== 102418 37 100.0 35 ..................................... AGTCGGCAGTATCGGAGGATTTTTTGCGCTTTTGG 102490 37 100.0 33 ..................................... TTCATACTCTATCTGAGGTATTGATAGATTTTG 102560 37 100.0 33 ..................................... AAAAGCTATTGGGCATAGAGAAAATGAAAAATA 102630 37 100.0 35 ..................................... TCGCAGTATTAATTACGAACTACGAATTACACTAA 102702 37 100.0 39 ..................................... TTTCACAATACCAAAGGCACAAACTTGCAGGGGCAAAAA 102778 37 100.0 33 ..................................... CAGCGATCGCTTGATCATCGCCCTTGGTCTTGG 102848 37 100.0 37 ..................................... GAGGATTTGGAAAAACGATAGTTACTAGTATAAGGAG 102922 37 100.0 37 ..................................... ATCTTCCTCATGTTGCCAGCTAGGACTGTACGTCATT 102996 37 100.0 41 ..................................... CTATTGGCAGGCATTCCTTGTGCAGAATCCAGCTTGCTGGC 103074 37 100.0 38 ..................................... GTTGAATTCCAACTCAATTCCAAACTCAATCCCCGCAG 103149 37 100.0 41 ..................................... TGCTGATAGTGTGGCGATCGCATACTACTTCCAGCCCTGAA 103227 37 100.0 37 ..................................... AAATTAATCGATTCATATTTTTGGTATGTATTCACTG 103301 37 100.0 39 ..................................... CAGCATCTATTGAAAGAATAATAGAAAGTGACCCTGTTC 103377 37 100.0 42 ..................................... GGAATATTTTGGCGGTGGGACACACCGTTGCAGTCTGTGGAG 103456 37 100.0 36 ..................................... CATGAAACCAGTAATATTTTCGACATTGTAAAGGCG 103529 37 100.0 34 ..................................... CTGCGAAAAACGTTGAGGTCGTTCAACGTCAAAT 103600 37 100.0 34 ..................................... ATGATTTTTTATCGGGGTCAACGGTGAATTTGTA 103671 37 100.0 33 ..................................... AAGTTTGACACTCAAATAAGCGCCAATTTGTGC 103741 37 100.0 34 ..................................... AATTAGTATTTTTCAATAACTCAAATCATGCTAA 103812 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================== ================== 20 37 100.0 36 ATTGCAATTCAAACTAATCCCTATTAGGGATTGAAAC # Left flank : GCTTTGTCGTAAATGTAGTAACCTGTGAAGGTTTCCACATCAATGGTGTCGCCAGAATCAATCGTCAGTGCTGGTGCTAATAAATGGGAGAAGCCACCAAGATGCACTGTTTCTTTGGTGGCTTTTAAGATGTGGTGGGTCATTACCGCGATTCTGTGCAAGATTATTGCTTAGAATAGCGGATTAGCTGTGGTAAATCTTGATGTAATATCGAAATACCTGACTTTTGAGAACAGTCGGATATATCGACAGCGTAAGACAAAATTTCGCAAAATGCGCGGATGGGTAGGTGTAGAAAATCGCCTTTGCTCAACAATGGCTGGATTCCTTTAAGGACAAGCTTTTAGAGAAAATTTTAATTGAAATTATCCGCGCACCTTACACAGTCTATATTTCAGCTATTTCATGTAAATCAACTGACATTTCACTATGTTAGAATTAACCCATCCGCGAAACCGCACCTTGAAAACTAAATACAGTAAGCTTTTCCGGCTCCCGCT # Right flank : GAGCGGCGGCGGTGGGG # Questionable array : NO Score: 9.26 # Score Detail : 1:0, 2:3, 3:3, 4:1.00, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCAAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: F Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: R [-7.20,-7.50] Score: 0.37/0.37 # Array degeneracy analysis prediction: NA [0-0] Score: 0/0.41 # AT richness analysis in flanks prediction: F [50.0-3.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [4.77,0.37 Confidence: HIGH] # Array family : NA // Array 1 88565-87796 **** Predicted by CRISPRDetect 2.4 *** >NZ_JADEWI010000021.1 Nostoc sp. LEGE 06077 NODE_45_length_88628_cov_23.4689, whole genome shotgun sequence Array_Orientation: Reverse Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ===================================== ========================================= ================== 88564 37 100.0 35 ..................................... AAGTGAAGGCGGATAAGATATAATACAGTCATAAG 88492 37 100.0 34 ..................................... ATTTTTCTCTAAGTCATTGCGATCGCTCCAAATA 88421 37 100.0 36 ..................................... GACCCCGGCAAAGTTCCAGTAAAAAAGTAGAAGTTT 88348 37 97.3 34 .........A........................... GTCAGAGATAATTAAAAGTACTTTCAATGAATTT 88277 37 100.0 34 ..................................... ACTGAAACTCAATCCCGCAAAAGCACTACTGTGT 88206 37 100.0 35 ..................................... GAGCCAAGTGTAGTATGTTTTCCGTGAAAAATAAA 88134 37 100.0 41 ..................................... TTCCTGCCAAGACTCGGCAAATACTTTGAGGAAGGCTTTGA 88056 37 100.0 38 ..................................... AAAAATGCCAAAGTGTAAATAATTTACAAGTGCATCAC 87981 37 100.0 41 ..................................... AAGTTTATTGGCTACGTACAAAGCGATGGTACGATTCGCAC 87903 37 100.0 34 ..................................... ATTGAAGCGCTATAAGCTCCAGCGATTGTTGTAG 87832 37 100.0 0 ..................................... | ========== ====== ====== ====== ===================================== ========================================= ================== 11 37 99.8 36 ATTGCAATTCAAACTAATCCCTATTAGGGATTGAAAC # Left flank : ATTCAAACTAATCCCTATTAGGGATTGAAACCAAGCGGGTTATTGACCGGAAGAGGCAAGCGA # Right flank : GAACAAGCGATCGCAATGTTCCCCAACGGTAGGGGCGAACGGCCGTTCGCCCCTACTTAGATTTTTTCAAAAATAAAATCGGACTGCTATATTGCTTTACCCAACATACATTTTTACTACAGTTTTTATACTAACTATTTTCTTGAAAACGCCTTCTATCTTCAATCAGTTCTTCTAGCTTTTCTACCTCTTCAAATGTATAAAATGTTTGATTCGGCTCAGATGTGATTTTATCCATCAAAGCGTGAAAAGCTTCAGTATCGTTGCGATGTTTTAACAGATAAGCTTTCAACTCAGATTTACTCATTGCTGCAAAGTTTGGTTTTGTCATTCTTCGTATCTCCATTTGGCACTTAGCGCACGGCTATTCGCCGAAAGTGGATGTACCCACACGGTTGATGAGTAACTTTAACAACGCTGCTGTGTTTCTACTGTTAGTTTACCGATATAACCAAACACGCAATAAAGAAAGTAACTGTTCAATATCTACGGGTTTGGTG # Questionable array : NO Score: 9.25 # Score Detail : 1:0, 2:3, 3:3, 4:0.99, 5:0, 6:0.25, 7:0.01, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : ATTGCAATTCAAACTAATCCCTATTAGGGATTGAAAC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: R Score: 4.5/4.5 # A,T distribution in repeat prediction: NA [Repeat is AT rich:67.57%AT] # Reference repeat match prediction: NA # Secondary Structural analysis prediction: F [-7.50,-7.20] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [0-1] Score: 0.41/0.41 # AT richness analysis in flanks prediction: R [40.0-53.3]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: R [0.78,4.77 Confidence: HIGH] # Array family : NA //