Array 1 25130-28587 **** Predicted by CRISPRDetect 2.4 *** >NZ_MSJO01000145.1 Streptomyces sp. CBMA370 CBMA370_145, whole genome shotgun sequence Array_Orientation: Forward Position Repeat %id Spacer Repeat_Sequence Spacer_Sequence Insertion/Deletion ========== ====== ====== ====== ============================= ================================== ================== 25130 29 100.0 32 ............................. ATTGGGTCGCTGACCGTCGCCGGAGGCGTGGC 25191 29 96.6 32 ............................T CCTCGGTCGCTCAACGACGAAAGACCTGTTCC 25252 29 100.0 32 ............................. CGTAGGCGGACGCCCTCCACCCGAGAGTCCGA 25313 29 96.6 32 ............................G GCGTCGCGCATCGCCGTCTCGACGGCGTCCCG 25374 29 96.6 32 ............................T CGCCGTCGCCTGCCCGCCCGGCACCCCCCTCT 25435 29 96.6 33 ............................A CGCACTCGGCGTCGTGCCCGTCCCGCAGGGAGC 25497 29 100.0 32 ............................. GTCCGGTCGGCTTCGGGACGTCGGCGGCTGAG 25558 29 100.0 32 ............................. AGGTCGAGAGTTTCGAGGTCGGCCGGATTGAG 25619 29 100.0 32 ............................. CATGTCGTGCCGTACTCGATCACGCCCTCCCC 25680 29 96.6 32 ............................T CAGAAAACTCCTGCTAGAGCCCCGCACGCCTC 25741 21 72.4 0 .....................-------- - Deletion [25762] 25762 29 100.0 32 ............................. GATCCCGGCCTTGCAGTACCGAGGCGCCCCGG 25823 29 100.0 32 ............................. CTGGCCCGGTACATCAAGGACGGCACCGTCAC 25884 29 100.0 32 ............................. CGGCAGGCCGTTGGCACCGGCTGCGAAGGCCA 25945 29 100.0 32 ............................. CTTGCCGCCGCCCGCGCCGGGCTCGACTCGCT 26006 29 100.0 32 ............................. TCACCCGCAGCGGCGACCTCACCCGCGTCGGC 26067 29 100.0 32 ............................. AGTGGTCGGCTTCGACTTGGGCATCGTGCGGT 26128 29 100.0 33 ............................. TCCCGGTCGTCCCCGACCGGGTGTCCGCCGCCG 26190 29 96.6 32 ............................T CCACGCTCCCCGCCCGGGTCGGAAAGTCAAGA 26251 29 100.0 32 ............................. TGGCAACGGGCCAACGAGGGCGCGCCGAAGGG 26312 29 96.6 32 ............................G AAGCGGGCCGGGGAGCAGTTCGGCAAGCTGCT 26373 29 100.0 33 ............................. TTCCGAATCACCTTCGACGGGGACCCAGCGGCA 26435 29 100.0 32 ............................. GTCTCCGTCCCCTGAAAATCTGAGGTACCGAG 26496 29 100.0 32 ............................. CGTTCGCGCCCCACGTGATCTCGATGGTGCGG 26557 29 100.0 32 ............................. CGTCGCCGACTCGGGCGCCGAGGCCCTCGCCG 26618 29 100.0 32 ............................. GTACATCGATCAAGACACCGGCGTCCCCTCAG 26679 29 100.0 32 ............................. GGGAAGAAGGCCCCGGCCCCGGTCGCGCGCCC 26740 29 100.0 32 ............................. AATGCGGCGTACCGCAGGAAGGCGGGCACGAG 26801 29 93.1 32 ...A........................G TCGCAGCGCATCGTCCTGTGGCCCGCCTTCCG 26862 29 100.0 32 ............................. TCCAGCGGAGCAGGGTGACCTCGCCCTCCTTG 26923 29 100.0 32 ............................. TCCAGCGGAGCAGGGTGACCTCGCCCTCCTTG 26984 29 100.0 32 ............................. GCGGTCGGGGCGCCGTGCGACCGGCGCGACCG 27045 21 72.4 0 .....................-------- - Deletion [27066] 27066 29 69.0 7 ...........C.GAT...TCA.C.A... AGCTCGG CCCC [27084] Deletion [27102] 27106 29 100.0 32 ............................. TCCGCGAGGATCAGAGCGCGGTGCTCGGCCCG 27167 29 100.0 20 ............................. TGCCGCCAGCGCGCGTACGA Deletion [27216] 27216 29 100.0 32 ............................. ACGGTCGGGTCACCGGTGACGATCGAGACGCC 27277 29 96.6 32 ..........................T.. TCGGGGGCGCGGTCCGCCGTAGGCGGCTGAGG 27338 29 96.6 32 ...................A......... TGGTCGAGGTGGTCGTGGAACGCCCGCCCGTC 27399 29 100.0 32 ............................. GGGCCTGCCGCAACTCGCGGCAGGCCCTTTCA 27460 29 100.0 32 ............................. CAGCCGCAGCGTCTTCGCCTCGCTCGTGCCGA 27521 29 100.0 32 ............................. GGTCGCCTCGTCCATCCGTCGTACGGCCGCCT 27582 29 100.0 32 ............................. TGCTCGGCATGTCCCAGCGGCAGGTGGAGCGG 27643 29 100.0 32 ............................. CAAATCCGACCGCACCTGACCAGGCCGATCGT 27704 29 100.0 32 ............................. GAGTGAGCCGCTGAATCCCCTCTCGGAGCCGC 27765 29 100.0 34 ............................. CATGGCGGTGCCGGACTTGTTGGGGAGGCTCGCC 27828 29 100.0 32 ............................. TGTAGACCTGTATTCATTGAACAGGGAAGTGT 27889 29 100.0 32 ............................. GCCGTGGCGAGGGCGTCGAGGGTGTCGCGGTC 27950 29 96.6 32 ...................A......... CGTCACACCGTTTTCGGCCCGGGCGCCCTCGG 28011 29 100.0 32 ............................. GGCAGGGCGCGCATCACGCTGCGCAGCAGGAG 28072 29 96.6 32 .........A................... TCAAGGTGCCCGGCCGCGACCTCGGCCCACGT 28133 29 100.0 32 ............................. CTCCTGCGGATCGTGCCGGCGCTCGGTCCGGG 28194 29 100.0 32 ............................. GAGATCGACGTGCCGGAAGGCGACGTCGACCG 28255 29 100.0 32 ............................. TGGGGACAGGTCGCGGCCGCGCTCGACACCAC 28316 29 96.6 32 ...............C............. CGGTGCAACGCCTCGTCGTCCAAGCCCGCCGA 28377 29 96.6 32 ............................T CCATCGCGGTGGCGACGGCGGCGAGCAGCTGG 28438 29 93.1 32 .................A.......C... ATTGCCGCCACCCACACCTGGTCGGGGGCGGG 28499 29 86.2 32 ...........C.........AC..A... CGCCCCTACTTCACGAAGGTCCGCAGGTCCTC 28560 28 72.4 0 ..A.......TA.G...-.A..AC..... | ========== ====== ====== ====== ============================= ================================== ================== 59 29 96.9 30 GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Left flank : TCTGCTCCCCTCCGGCCGCAACTACGGAGACGAGCCGATCTGGTGACCGTCATCGTTCTGACCAACTGCCCCACGGGCCTGCGCGGATTCCTCACGCGCTGGCTCCTGGAAATCTCCCCGGGCGTCTTCCTGGGCTCCCCGTCAGCCCGCGTACGGGACCTCCTCTGGGACGAGATCCGCACCTACTCCGGCCAGGGCCGCGCGCTCCTGGCCCACACCACCGACAACGAACAGGGCTTCACCTTCCGCACCCACTCCCACACCTGGCACCCCACGAACCACGAGGGCCTCACCCTCCTCCACCGCCCGACCCACCACACCCCGGCCGGAGAAACCCCTCCCTCCCCGCACGAGCCACCCCGCACGGGGTGGAGCAAGGCGGCCAAGCGACGGAGGTTCGGCAAGTGATGCCCCATGTGTGCGATATGGGCGTTAGGCCGGGACTTGGTAAAGCGGGTAAAATCGCTTGGCTGGGTGGGTGAATGCGCAGGTTGGGGCTT # Right flank : CCCGCGCCACACCCCACACCCCACAGCCCCGAGCCAGTCACCCAGCCCGGGGCCATCATCCTGAGGATCCGTCAGAAGCGCACGTCCGAGCAGGCGTAGAACGCGTTGCCCGTGTCTGCGATGTTCCAGACGCCGAGGATGAGGTGGCGGCCGGTCTTCTGGGGGAGGACGCCCGTGTGGGTGACCGTGGCGCCGGGCTGGCGGCCTCCGAAGGGGACCGTCAGGAAGGGCTGCGGGTCCAGGTCGGCCCTGGTCAGGGGCTTGGTGGGGTCCCAGCCGTCCTTGGTGATGTAGTAGCGGAAGTCAGTGGTGGCGTGGCGCGCGCTGATCCGCCAGAGGAAGGTGTGGTTGGCCCCGGCGGTCAGGCTGGTGGCCGGCCAGTTTCCGCCGCGCGGGTCGTCCAGCTCGGAGAAGCGTCCGACGCCGCCCGAGCAGATGTGCCCGTCGGCCGGGCCGCGCGTGGGGAATCCCTTGTCGCCTTCCACGCTCGGCGGCTCCCA # Questionable array : NO Score: 5.96 # Score Detail : 1:0, 2:3, 3:0, 4:0.85, 5:0, 6:0.25, 7:-0.14, 8:1, 9:1, # Score Legend : 1: cas, 2: likely_repeat, 3: motif_match, 4: overall_repeat_identity, 5: one_repeat_cluster, 6: exp_repeat_length, 7: exp_spacer_length, 8: spacer_identity, 9: log(total repeats) - log(total mutated repeats), # Primary repeat : GTGGTCCCCGCGCATGCGGGGGTGGTCCC # Alternate repeat : NA # Directional analysis summary from each method: # Motif ATTGAAA(N) match prediction: NA Score: 0/4.5 # A,T distribution in repeat prediction: R [1,5] Score: 0.37/0.37 # Reference repeat match prediction: F [matched GTGGTCCCCGCGCATGCGGGGGTGGTCCC with 100% identity] Score: 4.5/4.5 # Secondary Structural analysis prediction: F [-13.00,-12.30] Score: 0.37/0.37 # Array degeneracy analysis prediction: F [1-18] Score: 0.41/0.41 # AT richness analysis in flanks prediction: F [43.3-25.0]%AT Score: 0.27/0.27 # Longer leader analysis prediction: NA # ---------------------------------------------------------------------------- # Final direction: F [5.55,0.37 Confidence: HIGH] # Array family : I-E [Matched known repeat from this family], //